ID GQ206144; SV 1; linear; genomic RNA; STD; VRL; 2460 BP. XX AC GQ206144; XX DT 28-JUL-2009 (Rel. 101, Created) DT 28-JUL-2009 (Rel. 101, Last updated, Version 1) XX DE Tomato bushy stunt virus isolate EghTBSV RNA-dependent RNA polymerase gene, DE partial cds; and 33 kDa protein gene, complete cds. XX KW . XX OS Tomato bushy stunt virus OC Viruses; Riboviria; Tombusviridae; Procedovirinae; Tombusvirus. XX RN [1] RP 1-2460 RA Fattouh F.A., Hafez E.E., Saber G.A., Salah A.; RT "Molecular Characterization of Egyptian Isolate Tomato Bushy Stunt Virus RT (TBSV) and the Disclosure of Defense Genes Against the Virus"; RL Unpublished. XX RN [2] RP 1-2460 RA Fattouh F.A., Hafez E.E., Saber G.A., Salah A.; RT ; RL Submitted (04-APR-2009) to the INSDC. RL Plant Molecular Pathology, Arid Land Institute (ARADI), Mubarak City for RL Scientific Research and Technology Application, Alexandria 21934, Egypt XX DR MD5; 7a27c2859a8adecf18a0caf0470e4dbc. DR RFAM; RF00171; Tombus_5. DR RFAM; RF00510; Tombus_IRE. XX FH Key Location/Qualifiers FH FT source 1..2460 FT /organism="Tomato bushy stunt virus" FT /host="Lycopersicon esculentum" FT /isolate="EghTBSV" FT /mol_type="genomic RNA" FT /country="Egypt" FT /db_xref="taxon:12145" FT CDS 167..>2460 FT /codon_start=1 FT /transl_except=(pos:1055..1057,aa:OTHER) FT /product="RNA-dependent RNA polymerase" FT /note="92 kDa protein; readthrough stop codon" FT /db_xref="GOA:C7DT13" FT /db_xref="InterPro:IPR002166" FT /db_xref="InterPro:IPR007094" FT /db_xref="InterPro:IPR013707" FT /db_xref="UniProtKB/TrEMBL:C7DT13" FT /protein_id="ACT67403.1" FT /translation="METIKRMIWPKKEIFVGDFAIGVNRTAPVDIFQLVCRVVLRYMRT FT GKIDCDSDSMTKFIVELLKTDCAAKWEWFMKRRQRGDYVIPLSIAAIPIIPLLSYATWV FT RAVSVRAFGNELSFNVRVPRPSVPKKGLLLRLAAGLAFRPICALAVYATLPREKLSVFK FT LRTEARAHMEDEREATDCLVVEPARELKGKDGEDLITGSRLTKVIASTGTPRRRPYAAK FT IAQVARAKVGYLKNSPENRLIYQRVMIEIMDKDCVRYVDRDVILPLAIGCCFVYPDGVE FT ESAALWGSQESLGVKXGGLVRLPGVVTQINRDIPSDVLLPQEVLEVRAGPPNAKDRNIF FT MVAGCPSQARFLVHNHCLKNLKRGLVERVFCVERNGKLARAPQPTKGAFGRLSPFRKAV FT CEKVGVAHRLGYDGFLSYYDGAKLRTYTRAVESLHITPVSERDSHLTTFVKAEKISTSK FT GDPAPRVIQPRNPRYNVELGRYLRHMESKLMKAVDGVFGETTCIKGYSADEVGAIFREK FT WDRFDKPVAIGLDAWRFDQHCSVEALQYEHSFYRAMYPGNKLLGKLLEWQLHNKGKGYV FT PDGTITYRKEGCRMSGDINTSLGNYLLMCAMVHGYMRHLGINEFSLANCGDDCVLILER FT RNLKQVQRTLPEYFLNLGYTMKVERPVFQLEEVEFDQAHPVQFQGGWKMVGNVRTAMRK FT DVHCVNNIRDLATRRAWSNAQHHGGLALRAGIPVVETFYSRFKLYDTPRKHQRIDTVTN FT VHKWRGSGGSYV" FT CDS 167..1057 FT /codon_start=1 FT /product="33 kDa protein" FT /db_xref="GOA:P90340" FT /db_xref="InterPro:IPR013707" FT /db_xref="UniProtKB/TrEMBL:P90340" FT /protein_id="ACT67404.1" FT /translation="METIKRMIWPKKEIFVGDFAIGVNRTAPVDIFQLVCRVVLRYMRT FT GKIDCDSDSMTKFIVELLKTDCAAKWEWFMKRRQRGDYVIPLSIAAIPIIPLLSYATWV FT RAVSVRAFGNELSFNVRVPRPSVPKKGLLLRLAAGLAFRPICALAVYATLPREKLSVFK FT LRTEARAHMEDEREATDCLVVEPARELKGKDGEDLITGSRLTKVIASTGTPRRRPYAAK FT IAQVARAKVGYLKNSPENRLIYQRVMIEIMDKDCVRYVDRDVILPLAIGCCFVYPDGVE FT ESAALWGSQESLGVK" XX SQ Sequence 2460 BP; 639 A; 478 C; 693 G; 650 T; 0 other; agaaattccc caggatttct cgacctagta cgtctacctg gtgacttgcg ctgtctgttg 60 ctttgcgtag ggaatttctc tccaatatta ttatctttaa tttggggttt gaaggttggg 120 tctacccttc ggggggataa attgtaactt ccaacaaata agcgacatgg agaccattaa 180 gaggatgatc tggcctaaga aagagatttt tgtgggtgat ttcgcgatcg gagttaatag 240 gacggcaccg gtggacattt tccaattggt gtgtcgtgtg gttctaagat acatgaggac 300 agggaaaata gactgtgatt ctgacagcat gactaagttt atagttgaat tacttaaaac 360 tgattgtgct gccaaatggg agtggtttat gaagagacgg cagaggggcg actatgttat 420 ccctctatct atagccgcca tcccaatcat accgctgttg agttatgcca catgggtacg 480 cgcagtctca gtcagggcct ttgggaatga actttcgttc aatgtcagag tacctagacc 540 atctgtacct aagaaaggat tgctcctcag actggcggca ggcctagcgt tcagacctat 600 atgcgcgctg gcagtgtacg ctaccctacc tagggaaaaa ctgtcggtat ttaagctgag 660 aaccgaggca cgcgcacata tggaggatga gagagaagcg acagattgct tggtggttga 720 gccggcacgg gaactcaagg gtaaggatgg tgaggatctc atcactggta gtagattaac 780 taaggtgatt gcgtccacag ggacgcctcg caggaggccg tatgcagcca agatcgcaca 840 ggttgcgaga gctaaggtgg gttaccttaa gaatagtcct gagaatagac taatctacca 900 gcgagtgatg attgagatca tggacaaaga ctgcgtcagg tatgttgaca gggatgtcat 960 attgccattg gctattggat gctgttttgt ctatccggat ggagtggagg agtcggcggc 1020 actatggggt tcccaggaat cccttggtgt caaataggga ggcctagtac gtctacctgg 1080 tgttgtaaca cagatcaatc gagatatccc atctgatgtg ttacttcccc aggaggtgct 1140 agaggttcgt gcaggacctc ccaatgctaa ggaccgtaat atatttatgg ttgcaggttg 1200 cccatcacag gcacggttct tagtacataa tcactgcctg aaaaacctta aaaggggtct 1260 tgtggagaga gtcttctgcg tagagagaaa cgggaagctc gctcgcgctc cacaacctac 1320 caaaggagct tttggacgtc tttccccgtt caggaaagcg gtttgtgaga aggttggggt 1380 agcccaccga cttgggtatg atgggtttct gtcatactac gacggtgcga aactccgtac 1440 ttacacacga gccgtggaga gtctgcatat cacacctgtt tccgagaggg atagtcattt 1500 gactaccttc gtgaaagcag agaagatatc gacgtctaaa ggtgacccag cacctcgggt 1560 gattcagcct cgaaacccga ggtacaatgt ggaacttgga agatatctac ggcatatgga 1620 atccaagctg atgaaagctg ttgatggcgt gttcggagaa acaacatgca tcaaaggata 1680 ctctgccgac gaggtgggtg caatttttcg ggagaaatgg gataggtttg ataaacctgt 1740 agccataggt ctcgatgcat ggaggtttga tcaacactgt tccgtggagg ctttgcaata 1800 tgagcatagt ttctacaggg ccatgtaccc tggcaacaag cttttgggca agttgttgga 1860 atggcaactc cataataaag gtaaaggtta tgtccctgat gggactataa cttatcgtaa 1920 ggagggttgt cgtatgagtg gggatataaa cacttcgttg gggaactatc tgttgatgtg 1980 tgcaatggta catgggtaca tgcgtcattt ggggattaat gaatttagtc tggcgaactg 2040 tggggatgat tgcgttctca ttcttgagcg caggaatctt aaacaggtgc agagaactct 2100 gcctgagtat ttccttaatt tgggttatac catgaaggtt gagcgacctg tatttcaatt 2160 ggaagaggtt gaatttgacc aggcacaccc agtacagttt caagggggtt ggaagatggt 2220 gggaaatgtc cgtactgcta tgagaaaaga cgtgcactgt gtcaataata tacgcgattt 2280 ggcgacgagg agagcttgga gtaatgctca acatcatgga gggctagcac ttagggctgg 2340 tatacctgtg gttgagactt tttactccag gttcaagctg tatgatacac ctcgtaagca 2400 tcaacgcatt gacacagtca ctaatgttca taagtggcgt ggatcgggtg ggagctatgt 2460 //