ID FR878069; SV 1; linear; genomic RNA; STD; VRL; 6392 BP. XX AC FR878069; XX DT 10-JAN-2012 (Rel. 111, Created) DT 10-JAN-2012 (Rel. 111, Last updated, Version 1) XX DE Tobacco mosaic virus strain Ohio V, complete genome, genomic RNA XX KW complete genome. XX OS Tobacco mosaic virus strain Ohio V OC Viruses; Riboviria; Virgaviridae; Tobamovirus. XX RN [1] RP 1-6392 RA Willingmann P.P.; RT ; RL Submitted (23-JUN-2011) to the INSDC. RL Willingmann P.P., Phytomedizin, Biozentrum Klein-Flottbek und Botanischer RL Garten, Ohnhorststrasse 18, Hamburg, Hamburg 22609, GERMANY. XX RN [2] RA Koerbelin J., Willingmann P., Adam G., Heinze C.; RT "The complete sequence of Tobacco mosaic virus isolate OHIO V reveals an RT extreme accumulation of silent mutations in all open reading frames"; RL Unpublished. XX DR MD5; 2083f2d5ba4a738909762ceb824c7cc1. DR EuropePMC; PMC5249172; 28107419. XX FH Key Location/Qualifiers FH FT source 1..6392 FT /organism="Tobacco mosaic virus strain Ohio V" FT /isolate="Ohio V" FT /mol_type="genomic RNA" FT /country="USA" FT /db_xref="taxon:1052902" FT CDS 69..4919 FT /transl_except=(pos:3417..3419,aa:OTHER) FT /gene="p183" FT /product="putative replicase" FT /note="read-through codon" FT /db_xref="GOA:H1ZYJ7" FT /db_xref="InterPro:IPR001788" FT /db_xref="InterPro:IPR002588" FT /db_xref="InterPro:IPR007094" FT /db_xref="InterPro:IPR027351" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:H1ZYJ7" FT /protein_id="CCC33060.1" FT /translation="MAYTQTATTSALLDTVRGNNSLVNDLAKRRLYDTAVDEFNARDRR FT PKVNFSKVISEEQTLIATRAYPEFQITFYNTQNAVHSLAGGLRSLELEYLMMQVPYGSL FT TYDIGGNFASHLFKGRAYVHCCMPNLDVRDIMRHEGQKDSIELYLSRLERGNKQVPAFQ FT KEALDRYAEVPNEVVCHNTFQTCEHQQMQHTGRVYAIALHSIYDIPADEFGAALLRKNV FT HTCYAAFHFSENLLLEDSHVNLDEINACFSRDGDKLTFSFASESTLNYSHSYSNILKYV FT CKTYFPASNREVYMKEFLVTRVNTWFCKFSRIDTFLLYKGVAHKSVDSEQFYTAMEDAW FT HYKKTLAMCNSERILLEDSSSVNYWLPKMRDMVIVPLFDISLETSKRTRKEVLVSKDFV FT FTVLNHIRTYQAKALTYANVLSFVESIRSRVIINGVTARSEWDVDKSLLQSLSMTFFLH FT TKLAVLKDDLMISKFSFGPKTVCQYVWDEISLAFGNAFPSVKERLLNRKLIKVAGDALE FT IRVPDLYVTFHDRLVTEYKASVDMPALDIRKRMEETEVMYNALSELSVLKDSDKFDVDV FT FSQMCQSLEVDPMTAAKVIVAVLSNESGLTLTFEKPTEANVALALQDQEKASEGALVVT FT SRDVEEPSMKGSMARGELQLAGLAGDHPESSYTKNEEIESLEQFHMATAESLIRKQMSS FT IVYTGPIKVQQMKNFIDSLVASLSAAVSNLVKIIKDTAAIDLETRQKFGVLDVASRKWL FT IKPTAKSHAWGVVETHARKYHVALLEYDEQGIVTCDNWRRVAVSSESVVYSDMAKLRTL FT RKLLQNGEPHVSNAKVVLVDGVPGCGKTKEILSRVNFEEDLILVPGKQAAEMIRRRANA FT SGIVVATKDNVRTVDSFTMNYGKGTRCQFKRLFIDEGPMLHTGCVNFLVSMSLCDIAYV FT YGDAQQIPYINRVSGFPYPAHFSKIEVDEVETRRTTLRCPADVTHYLSKRYEGFVMSTS FT SVKKSVSQEMVSGAAMINPVSKPLHGKILTFTQSDKEALLSRGYSDVHTVHEVQGETYS FT DVSLVRLTPTPISIIAGDSPHVLVALSRHTCSLKYYTVVMDPLVSIIRDLEKLSTYLLD FT MYKVDAGTQXQLQVDSVFRGSNLFVAAPKTGDISDMQFYYDKCLPGNSTMMNNFDAVTM FT RLTDISLNVKDCILDMSKSVAAPKDQINPLIPMVRTAAEMPRQTGLLENLVAMIKRNFN FT APELSGIIDIENTASLVVDKFFESYLLKEKRKPNKNASLFSRESLNRWLEKQEQTTIGQ FT LADFDFVDLPAVDQYRHMIKAQPKQKLDTSIQSEYPALQTIVYHSKKINAIFGPLFSEL FT TRQLLDSVDSSRFLFFTRKTPAQIEDFFGDLDSHVPMDILELDISKYDKSQNEFHCAVE FT YEIWRRLGFEDFLGEVWKQGHRKTTLKDYTAGIKTCIWYQRKSGDVTTFIGNTVIIAAC FT LASMLPMEKIIKGAFCGDDSLLYFPKGCEFPDVQHSANLMWNFEAKLFKKQYGYFCGRY FT VIHHDRGCIVYYDPLKLISKLGAKHIKDWEHLEEFRRSLCDVAGSLNNCAYHTQLDDAV FT WEVHKTAPAGSFVYKSLVKYLSDKVLFRSLFIDGSSC" FT mat_peptide 69..3419 FT /product="p126" FT mat_peptide 3420..4919 FT /product="p57" FT CDS 4903..5706 FT /gene="mv" FT /product="30 kDa movement protein" FT /db_xref="GOA:H1ZYJ8" FT /db_xref="InterPro:IPR001022" FT /db_xref="InterPro:IPR028919" FT /db_xref="UniProtKB/TrEMBL:H1ZYJ8" FT /protein_id="CCC33061.1" FT /translation="MALVVKGKVNINEFIDLTKTEKFLPSMFTPVKSVMCSKVDKIMVH FT ENESLSEVNLLKGVKLIEGGYVCLAGLVVTGEWNLPDNCKGGVSVCLVDKRMERANEAT FT LGSYYTAAAKKRFQFNVVPNYAITTQDAMKNVWQVLVNIRNVMMSAGFCPLSLEFVSVC FT IVYKNNIKLGLREKITSVRDGGPMELSEEVVDEFMEDVPMSIRLAKFRSRTGKKSDAQK FT GKSNNNIRSVPNRNHRNGRNFKEVVEKNNLIGDDSETSVAESDSL" FT CDS 5709..6188 FT /gene="cp" FT /product="17 kDa capsid protein" FT /db_xref="GOA:H1ZYJ9" FT /db_xref="InterPro:IPR001337" FT /db_xref="InterPro:IPR036417" FT /db_xref="UniProtKB/TrEMBL:H1ZYJ9" FT /protein_id="CCC33062.1" FT /translation="MSYTITTPSQFVFLSSAWADPTELINLCTNALGNQFQTQQARTVV FT QRQFSEVWKPSPQVTVRFPANDFKVYRYNAVLDPLVTALLGAFDTKNRIIEVENQANPT FT TAETLDATRRVDDATVAIRSAINNLIVELIRGTGSYNQSSFESSSGLVWSSGPAT" XX SQ Sequence 6392 BP; 1898 A; 1226 C; 1505 G; 1763 T; 0 other; gtatttttac aacaattacc aacaacaaca aacaacaaac aacattacaa atactattta 60 caactacaat ggcatacaca cagacagcta ccacatcagc tttgttagac actgtccgag 120 gaaacaactc cttggtcaat gatctagcaa agcgtcgtct atacgacaca gcggtggatg 180 aatttaacgc gcgagaccgc aggcccaaag taaatttttc gaaagtaata agcgaggaac 240 agacgcttat tgctacacgg gcatatccag aattccagat aaccttttac aatacgcaaa 300 acgccgtgca ttcgcttgca ggcggtctgc gatcattaga actggaatat ctgatgatgc 360 aagttcccta cggatcattg acttacgata taggcgggaa cttcgcatca catctgttca 420 aaggacgggc gtacgtacac tgttgtatgc ccaacttgga cgtccgcgac attatgcggc 480 acgaaggtca gaaagacagc atagaactgt acctttctag gctagagcga gggaacaaac 540 aggttcccgc gtttcagaag gaagcacttg acagatacgc agaagttccg aatgaagttg 600 tctgtcacaa tactttccaa acatgtgaac atcagcaaat gcagcacact ggcagagtgt 660 acgccatcgc gttacacagt atctatgata ttcccgctga tgaattcggg gctgctcttt 720 tgaggaaaaa cgtccatact tgttacgcag cctttcactt ctctgagaat ttacttctag 780 aagattctca cgttaatttg gacgaaatca atgcgtgttt ttcacgcgat ggggacaaat 840 tgacattttc ctttgcatct gagagtactc ttaattatag tcatagttat tctaatattc 900 tcaagtatgt gtgcaaaact tacttcccag cctctaatag agaggtttac atgaaggagt 960 ttttagtcac cagggtcaat acctggtttt gcaaattttc taggatagat acttttttac 1020 tgtacaaagg tgtagcccat aagagtgtag atagtgagca gttttatact gcaatggaag 1080 atgcatggca ttacaaaaag acacttgcga tgtgcaacag cgagaggatc ctgctcgagg 1140 attcttcatc cgtcaattac tggcttccaa aaatgagaga tatggtcata gtaccacttt 1200 ttgatatatc tcttgagacc agtaagagga cgcgcaagga ggtcttagta tccaaagatt 1260 ttgtgtttac tgttctcaac catatccgta catatcaagc caaagcactt acatacgcta 1320 atgtattgtc cttcgtagaa tctattcgat cgagggtaat tattaacgga gtaactgcga 1380 ggtctgagtg ggatgtggat aagtctttat tacaatcttt gtccatgacg ttcttcctgc 1440 atactaagct tgctgttcta aaagacgatc taatgatcag caagtttagt tttggtccaa 1500 agacagtgtg ccaatatgta tgggatgaga tttctctggc attcggaaac gcatttcctt 1560 ctgtgaaaga gcggctttta aaccggaaac tgattaaagt ggcgggtgat gcattagaga 1620 tcagggtgcc tgatttatat gtaactttcc acgacaggtt agtaaccgaa tacaaagcct 1680 cagttgatat gccagcgctt gacatcagga aaagaatgga agaaacagag gtgatgtaca 1740 acgcgctttc ggaactgtcg gtgcttaagg attctgacaa atttgatgtt gatgtttttt 1800 cccagatgtg ccaatcactg gaggtggacc caatgactgc agcaaaagtt atagtcgcgg 1860 ttctgagcaa tgaaagcggt ctcacgctca catttgaaaa acctactgaa gcaaatgtcg 1920 cattagctct gcaagatcaa gagaaagctt cggaaggtgc actcgtagtt acctcaagag 1980 atgtcgagga accatccatg aaaggctcaa tggcaagagg tgaattgcaa ttagccggtc 2040 ttgctggaga ccacccggaa tcttcctata ccaagaacga ggaaatagag tcgttagagc 2100 aattccatat ggcaacggca gaatcgttaa ttcgtaaaca gatgagttcg attgtgtaca 2160 caggtcctat taaagttcaa caaatgaaaa actttataga cagcctggta gcatcactat 2220 ctgctgcggt gtcgaatctt gtcaagatca taaaggatac tgctgctata gatctcgaaa 2280 cccgtcaaaa gttcggagtt ctggatgtgg catctaggaa gtggttgatt aaaccgactg 2340 ctaagagtca cgcatggggc gttgttgaga ctcatgcgag gaaataccac gttgcacttc 2400 tggagtacga tgagcagggt atagtaactt gcgacaactg gagaagagtt gctgttagtt 2460 ctgagtcggt tgtatattct gatatggcga agctcagaac tctgaggaaa ttgcttcaaa 2520 atggtgaacc tcatgttagt aacgcaaagg ttgttctcgt ggacggtgtc ccaggctgtg 2580 gaaaaactaa ggaaattctc tctagggtaa acttcgagga ggatttgatt ttagtgccag 2640 ggaaacaggc cgcggaaatg atcaggagac gcgcaaacgc ctcaggaatc gttgtagcta 2700 caaaggataa tgtccgaacc gttgattcat ttacgatgaa ttacggtaaa ggcacacgct 2760 gtcaattcaa gaggttgttc atcgatgagg ggccgatgtt gcatactgga tgtgtgaatt 2820 tccttgtgtc tatgtctttg tgcgatatcg cgtatgtata tggagacgca cagcagattc 2880 cgtacatcaa cagagtttca ggtttcccgt acccggctca tttttcaaaa attgaggtag 2940 acgaggtcga gacacgcaga actacgttgc gttgtcctgc cgatgtcact cactacttga 3000 gcaaaaggta cgagggcttt gtgatgagca cttcatctgt taagaaatct gtttcacaag 3060 agatggtcag tggtgcagcc atgatcaacc ctgtctcgaa gccattgcat ggtaagatct 3120 taactttcac acagtcggat aaggaggctc tactctcgag aggttactca gatgtacaca 3180 ccgtgcacga agtgcaaggt gagacatatt ccgatgtatc tcttgtgagg ctgacgccta 3240 cgcctatttc tatcatagca ggagatagtc ctcatgtttt ggttgcactg tcaaggcata 3300 catgttcgct caagtactac acagttgtaa tggatccttt agtcagcata attagagatc 3360 tagagaaact tagcacatac ttgttagata tgtacaaggt cgatgctggt acccaatagc 3420 aattacaggt cgactcggtg tttaggggtt cgaatctttt tgttgctgca ccaaagaccg 3480 gtgatatttc tgatatgcaa ttttactatg ataagtgtct ccctggaaat agcaccatga 3540 tgaataattt tgatgctgta accatgaggt tgactgacat ttctctgaat gtcaaagatt 3600 gcatattgga catgtctaag tctgtagctg cgcctaaaga tcaaatcaat ccactgatac 3660 caatggtacg aacggcggca gaaatgccac gccagactgg actattggaa aacttagtgg 3720 ctatgattaa aagaaacttc aatgcacccg agttgtctgg tataattgat attgaaaaca 3780 ctgcatcttt agttgtagat aaattctttg aaagttattt gcttaaagaa aaaagaaaac 3840 caaataaaaa cgcgtctttg ttcagtagag agtctctcaa cagatggttg gaaaagcagg 3900 aacagacaac aatcggtcag ctcgctgatt ttgattttgt ggatttacct gctgttgatc 3960 agtacaggca tatgataaaa gcacagccta agcagaaact ggacacttcc attcaatcgg 4020 agtatccagc tctgcaaacg attgtgtacc attcaaaaaa gatcaatgca atcttcggcc 4080 cgctctttag tgagctcacc cggcagttac tggacagtgt ggattcaagc agatttttgt 4140 tctttacaag gaagacaccg gcacaaatag aggatttctt cggagatctt gacagtcacg 4200 tgccaatgga tattttggag cttgatatat caaaatatga caaatctcaa aatgaattcc 4260 actgtgcagt cgaatatgaa atttggagga ggttgggttt tgaagatttt ctgggagaag 4320 tttggaagca gggacataga aagaccactc ttaaggatta cacagctggt ataaaaacct 4380 gcatatggta tcaaagaaag agtggggatg ttacgacttt cattggaaat actgtgatta 4440 tcgccgcttg tctggcttcg atgctcccga tggaaaaaat cattaaagga gccttttgcg 4500 gtgatgacag tctgctttat tttccgaaag gatgcgagtt cccggatgta cagcattcag 4560 caaatctcat gtggaacttt gaagcaaaac tgttcaaaaa acagtatggt tacttctgcg 4620 gaaggtatgt gatacatcat gatagaggct gtatagtata ttatgatcct ctaaagttaa 4680 tctcgaaact cggtgctaaa cacatcaagg attgggagca cttagaggag ttcagaagat 4740 ctctttgtga tgttgctggt tcgttgaaca attgtgcgta tcacacacag ttggacgacg 4800 cagtctggga ggtccataag accgccccgg ctggttcgtt tgtttataag agtttggtga 4860 agtatctgtc cgataaagtg ctttttagaa gcttgttcat agatggctct agttgttaaa 4920 gggaaagtga acatcaatga gtttattgac ttgaccaaaa cggagaaatt tttaccgtcg 4980 atgtttactc cggtcaaaag tgtgatgtgt tcaaaggtcg acaagataat ggtgcatgaa 5040 aatgaatcat tgtctgaggt caaccttctt aagggtgtga agctcattga aggtggatat 5100 gtctgtctgg ctggtctggt agttactggc gagtggaatt tgcccgacaa ttgcaaaggt 5160 ggtgtgagcg tctgtttagt ggacaagagg atggaaaggg ctaatgaagc aacacttgga 5220 tcctactata ctgcagcagc aaagaagaga ttccaattca atgttgtccc taactatgca 5280 attaccacgc aggacgctat gaagaatgtc tggcaggttt tagtcaatat cagaaatgtt 5340 atgatgtctg cgggtttttg tccgctttct ttggagtttg tgtctgtatg tatagtttat 5400 aaaaataaca taaaattagg tttgagagag aaaatcacaa gtgtgagaga cggagggccc 5460 atggaacttt ctgaagaagt tgtagacgag ttcatggaag atgtacctat gtcaatcaga 5520 cttgctaagt tccgatctcg aactggaaaa aagagtgatg cccaaaaagg gaaaagtaat 5580 aataatattc ggtcggtgcc gaacaggaac catagaaatg gcagaaattt taaagaggtg 5640 gttgaaaaga ataatttaat cggagatgat tcggagactt cagtcgccga gtcggattcg 5700 ttataaatat gtcttacaca attacaactc catctcagtt cgtgttcttg tcatcagcat 5760 gggccgatcc aacagaatta attaatttat gtactaatgc cttaggtaat cagttccaaa 5820 cgcaacaagc tcggactgtc gttcaacgac agttcagtga ggtgtggaaa ccgtcacccc 5880 aagtcactgt caggtttcct gcaaatgact ttaaggtgta caggtacaat gcagtactag 5940 atcctctagt taccgctttg ttaggagctt tcgatactaa aaatagaata atagaagtcg 6000 aaaatcaggc gaacccgaca accgctgaaa cgttggatgc tactcgtaga gtagacgacg 6060 caacagtggc aataaggagc gctataaata atttaatagt agaattgatc agaggaaccg 6120 gttcatacaa tcagagctct ttcgagagct cttctggttt ggtttggtct tctggtccgg 6180 caacttgaaa tagtcaagat gcttgataaa taacggagtg tgtccgtaaa cacacgtggt 6240 gcgtacgata acgcatagtg tttttccctc cacttaaatc gaagggttgt gtcatggatc 6300 gcgcgggttg aatgtatatg gttcatatac atccgctggc acgtaataaa gcgaggggtt 6360 cgaatccccc cgttaccccc ggtaggggcc ca 6392 //