ID   FR871892; SV 1; linear; genomic RNA; STD; VRL; 672 BP.
XX
AC   FR871892;
XX
DT   26-JUN-2011 (Rel. 109, Created)
DT   26-JUN-2011 (Rel. 109, Last updated, Version 1)
XX
DE   Citrus tristeza virus p25 gene for coat protein, genomic RNA, isolate SG29,
DE   clone 1
XX
KW   .
XX
OS   Citrus tristeza virus
OC   Viruses; Riboviria; Closteroviridae; Closterovirus.
XX
RN   [1]
RP   1-672
RA   YAHIAOUI D.;
RT   ;
RL   Submitted (24-MAY-2011) to the INSDC.
RL   Yahiaoui D., Istituto Agronomico Mediterraneo Di Bari, Integrated Pest
RL   Management, Via Ceglie, 9, 70010, ITALY.
XX
RN   [2]
RA   Yahiaoui D., Djelouah K., D'Onghia A., Catara A.;
RT   "Genetic marker analysis of Mediterranean Citrus Tristeza Virus (CTV) RNA
RT   populations";
RL   Unpublished.
XX
DR   MD5; 285a7d67671182172d202f8079418cdc.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..672
FT                   /organism="Citrus tristeza virus"
FT                   /host="Citrus sp."
FT                   /isolate="SG29"
FT                   /mol_type="genomic RNA"
FT                   /country="Italy"
FT                   /collected_by="Mediterranean Agronomic Institute of Bari"
FT                   /collection_date="2008"
FT                   /identified_by="Yahiaoui Dorsaf"
FT                   /clone="1"
FT                   /PCR_primers="fwd_name: CTV-CP-FW, fwd_seq:
FT                   atggacgacgaaacaaagaaattg, rev_name: CTV-CP-RV, rev_seq:
FT                   tcaacgtgtgttgaatttccca"
FT                   /db_xref="taxon:12162"
FT   CDS             1..672
FT                   /gene="p25"
FT                   /product="coat protein"
FT                   /db_xref="GOA:B8QIT5"
FT                   /db_xref="InterPro:IPR002679"
FT                   /db_xref="UniProtKB/TrEMBL:B8QIT5"
FT                   /protein_id="CCB84755.1"
FT                   /translation="MDDETKKLKNKNKEAKEGDDVVAAESSFGSLNFHIDPTLIAMNDV
FT                   RQLSTQQNAALNRDLFLTLKGKYPNLSDKDKDFHLAMMLYRLAVKSSSLQSDDDTTGIT
FT                   YTREGVEVDLSDKLWTDVVFNSKGIGNRTNALRVWGRSNDALYLAFCRQNRNLSYGGRP
FT                   LDAGIPAGYHYLCADFLTGAGLTDLECAVYIQAKEQLLKKRGADEIVVTNVRQLGKFNT
FT                   R"
XX
SQ   Sequence 672 BP; 191 A; 129 C; 176 G; 176 T; 0 other;
     atggacgacg aaacaaagaa attgaagaac aaaaacaagg aagcgaaaga aggggacgat        60
     gttgttgcag cggagtcttc tttcggttcc ttaaacttcc acatcgatcc gactctgata       120
     gcgatgaacg atgtgcgtca gttaagtacc caacagaacg ccgctttgaa cagagatttg       180
     ttccttactt tgaaagggaa gtatcctaat ttgtctgata aagacaaaga ctttcactta       240
     gctatgatgt tgtatcgttt agcggttaag agttcatcat tgcaaagtga cgacgacacc       300
     acgggcataa cgtacactcg ggagggcgtc gaagtggact tgtctgacaa actttggact       360
     gacgtcgtgt ttaattctaa gggtatcggt aaccgtacta acgcccttcg ggtctggggt       420
     agaagtaacg acgcccttta tttagcgttt tgtagacaga atcgcaattt gagttatggc       480
     ggacgtccgc tagatgcagg gattccggcc gggtatcatt acctgtgtgc agatttcttg       540
     accggagctg gcttgactga tttagaatgt gctgtgtaca tacaagctaa agaacaattg       600
     ttgaagaagc ggggggctga tgaaatcgta gttaccaatg tcaggcagct tgggaaattc       660
     aacacacgtt ga                                                           672
//