ID   FR871859; SV 1; linear; genomic RNA; STD; VRL; 672 BP.
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AC   FR871859;
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DT   26-JUN-2011 (Rel. 109, Created)
DT   26-JUN-2011 (Rel. 109, Last updated, Version 1)
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DE   Citrus tristeza virus p25 gene for coat protein, genomic RNA, isolate
DE   MAIB_Q96, clone 6
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KW   .
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OS   Citrus tristeza virus
OC   Viruses; Riboviria; Closteroviridae; Closterovirus.
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RN   [1]
RP   1-672
RA   YAHIAOUI D.;
RT   ;
RL   Submitted (24-MAY-2011) to the INSDC.
RL   Yahiaoui D., Istituto Agronomico Mediterraneo Di Bari, Integrated Pest
RL   Management, Via Ceglie, 9, 70010, ITALY.
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RN   [2]
RA   Yahiaoui D., Djelouah K., D'Onghia A., Catara A.;
RT   "Genetic marker analysis of Mediterranean Citrus Tristeza Virus (CTV) RNA
RT   populations";
RL   Unpublished.
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DR   MD5; d37b2eaeaf639b60076f0cbcae47cfb9.
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FH   Key             Location/Qualifiers
FH
FT   source          1..672
FT                   /organism="Citrus tristeza virus"
FT                   /host="Citrus sp."
FT                   /isolate="MAIB_Q96"
FT                   /mol_type="genomic RNA"
FT                   /country="Croatia"
FT                   /collected_by="Mediterranean Agronomic Institute of Bari"
FT                   /collection_date="2005"
FT                   /identified_by="Yahiaoui Dorsaf"
FT                   /clone="6"
FT                   /PCR_primers="fwd_name: CTV-CP-FW, fwd_seq:
FT                   atggacgacgaaacaaagaaattg, rev_name: CTV-CP-RV, rev_seq:
FT                   tcaacgtgtgttgaatttccca"
FT                   /db_xref="taxon:12162"
FT   CDS             1..672
FT                   /gene="p25"
FT                   /product="coat protein"
FT                   /db_xref="GOA:F8KUM4"
FT                   /db_xref="InterPro:IPR002679"
FT                   /db_xref="UniProtKB/TrEMBL:F8KUM4"
FT                   /protein_id="CCB84722.1"
FT                   /translation="MDDETKKLKNKNKETKEGDDVVAAESSFGSLNLHIDPTLITMNDV
FT                   RQLSTQQDAALNRDLFLTLKGKYPNLPDKDKDFHIALMLYRLAVKSSSLQSDDDTTGIT
FT                   YTREGVEVDLSDKLWTDVVFNSKGIGNRTNALRVWGRTNDALYLAFCRQNRNLSYGGRP
FT                   LDAGIPTGYHYLCADFLTGAGLTDLECAVYIQAKEQLLKKRGADEVVVTNVRQLGKFNT
FT                   R"
XX
SQ   Sequence 672 BP; 197 A; 130 C; 166 G; 179 T; 0 other;
     atggacgacg aaacaaagaa attgaagaac aaaaacaagg aaacgaaaga aggcgacgat        60
     gttgttgctg ctgagtcttc tttcggttcc ttaaacttac acatcgatcc aactctgata       120
     acgatgaatg acgtgcgtca gttgagtacc caacaggacg ctgctttaaa cagagacttg       180
     tttcttactt tgaaagggaa gtatcctaac ttacctgaca aagataagga ctttcacata       240
     gctttgatgt tgtatcgttt agcagttaag agttcatcat tacaaagcga tgacgacact       300
     acgggcataa cgtacactcg ggagggtgtt gaagtggatt tgtccgacaa actttggact       360
     gacgtcgtgt ttaactccaa gggtattggc aaccgtacta acgcccttcg agtttggggt       420
     agaactaacg atgcccttta cttagctttt tgtagacaga atcgcaattt gagttatggc       480
     ggacgtccgc tagatgcagg gattccgacc gggtaccatt acctgtgtgc agatttcttg       540
     accggagctg gcttgactga tttagaatgt gctgtgtaca tacaagctaa agaacaattg       600
     ttgaagaagc gaggggctga tgaagtcgta gttaccaatg tcaggcagct tgggaaattc       660
     aacacacgtt ga                                                           672
//