ID   FR851300; SV 1; circular; genomic DNA; STD; VRL; 2579 BP.
XX
AC   FR851300;
XX
DT   08-JUL-2011 (Rel. 109, Created)
DT   08-JUL-2011 (Rel. 109, Last updated, Version 1)
XX
DE   Potato yellow mosaic virus, strain Trinidad, isolate
DE   Grenada:Hermitage:2007, complete DNA-A segment sequence
XX
KW   complete viral segment.
XX
OS   Potato yellow mosaic virus
OC   Viruses; Geminiviridae; Begomovirus.
XX
RN   [1]
RP   1-2579
RA   Lett J.M.;
RT   ;
RL   Submitted (08-APR-2011) to the INSDC.
RL   Lett J.M., Bios, CIRAD-UMR PVBMT-Pole de Protection des Plantes, 7 Chemin
RL   de l'IRAT, 97410 Saint Pierre / Ile de La Reunion, FRANCE.
XX
RN   [2]
RA   Lett J.M., Perefarres F., Hoareau M., Lefeuvre P., De Bruyn A., Dottin M.,
RA   Prior P., Wicker E., Umaharan P.;
RT   "Tomato yellow leaf curl virus and Potato yellow mosaic virus associated
RT   with tomato yellow leaf curl disease in Grenada Island";
RL   Unpublished.
XX
DR   MD5; 6ee2bf3bd3dd589d5c7eeb5852771322.
XX
CC   Related sequence: FR851301
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2579
FT                   /organism="Potato yellow mosaic virus"
FT                   /segment="DNA-A"
FT                   /strain="Trinidad"
FT                   /isolate="Grenada:Hermitage:2007"
FT                   /mol_type="genomic DNA"
FT                   /country="Grenada:Hermitage"
FT                   /lat_lon="12.18 N 61.64 W"
FT                   /isolation_source="Solanum lycopersicum"
FT                   /collection_date="Mar-2007"
FT                   /db_xref="taxon:10827"
FT   CDS             165..920
FT                   /gene="AV1"
FT                   /product="coat protein (CP)"
FT                   /db_xref="GOA:G0LXT9"
FT                   /db_xref="InterPro:IPR000263"
FT                   /db_xref="InterPro:IPR000650"
FT                   /db_xref="UniProtKB/TrEMBL:G0LXT9"
FT                   /protein_id="CCA64218.1"
FT                   /translation="MPKRDAPWRSMAGTSKVSRNANYSPRAGIGPRINKAAEWVNRPMY
FT                   RKPRIYRTLRTPDVPRGCEGPCKVQSFEQRHDILHTGKVICISDVTRGNGITHRVGKRF
FT                   CVKSVYILGKIWMDENIKLKNHTNSVMFWLVRDRRPYGTPMDFGQVFNMFDNEPSTATI
FT                   KNDLRDRYQVMHRFYGKVTGGQYASNEQAIVRRFWKVNNHVVYNHQEAAKYENHTENAL
FT                   LLYMACTHASNPVYATLKIRIYFYDSILN"
FT   CDS             complement(917..1315)
FT                   /gene="AC3"
FT                   /product="replication enhancer protein (REn)"
FT                   /db_xref="GOA:G0LXU0"
FT                   /db_xref="InterPro:IPR000657"
FT                   /db_xref="UniProtKB/TrEMBL:G0LXU0"
FT                   /protein_id="CCA64219.1"
FT                   /translation="MDSRTGELITARQAENGVFIWEIENPLYFKINRVEDILYTRTRIY
FT                   NVQVRFNHNLRRALDLHKAYLNFQVWTTSMTASGSTYLARFRQLVIMYLDQLGVISINN
FT                   VIRAVRFATDRSYVNYVLENHSIKLKLY"
FT   CDS             complement(1062..1481)
FT                   /gene="AC2"
FT                   /product="transcriptional activator protein (TrAP)"
FT                   /db_xref="GOA:G0LXU1"
FT                   /db_xref="InterPro:IPR000942"
FT                   /db_xref="UniProtKB/TrEMBL:G0LXU1"
FT                   /protein_id="CCA64220.1"
FT                   /translation="MRLSKTGLSRMRSSSPSQPPSIKKAHRQAKRRAIRRRRIDLDCGC
FT                   SIYFHIDCAGHGFTHRGAHHCTSGREWRVYLGDRKSPLFQDKPSRGHTIHQNQDIQRPS
FT                   PVQSQPQESVGSPQSLPELPSLDDIDDSFWVDLFS"
FT   CDS             complement(1393..2445)
FT                   /gene="AC1"
FT                   /product="replication associated protein (Rep)"
FT                   /db_xref="GOA:G0LXU2"
FT                   /db_xref="InterPro:IPR001191"
FT                   /db_xref="InterPro:IPR001301"
FT                   /db_xref="InterPro:IPR022690"
FT                   /db_xref="InterPro:IPR022692"
FT                   /db_xref="UniProtKB/TrEMBL:G0LXU2"
FT                   /protein_id="CCA64221.1"
FT                   /translation="MPPKRFRINSKNYFLTYPKCSLSKEEALSQLQNLNTPTNKKFIKI
FT                   CRELHENGEPHLHVLVQFEGKYQCTNNRFFDLVSPTRSTHFHPNIQGAKSSSDVKSYID
FT                   KDGDSIEWGEFQIDGRSARGGQQSVNDTYAKALNAASAAEALQIIKEEQPQHFFLQHHN
FT                   LVANAAKIFARAPEPWIPPFQLSSFTNVPEQMQEWADEYFGRSSAARPERPISIIVEGD
FT                   SRTGKTMWARALGPHNYLSGHLDFNNRVYSNDVQYNVIDDVAPQYLKLKHWKELLGAQK
FT                   DWQSNCKYGKPVQIKGGIPAIVLCNPGEGSSYKAFLEKIDNASLKNWTLKNAVFITLTA
FT                   PLYQEGAQAS"
FT   CDS             complement(1794..2033)
FT                   /gene="AC4"
FT                   /product="C4 protein"
FT                   /db_xref="UniProtKB/TrEMBL:G0LXU3"
FT                   /protein_id="CCA64222.1"
FT                   /translation="MLHLPPKLCKLLRRNNHNTFSFSITIWLQMRPKYLPELRNHGFLR
FT                   FNSPRSLTCLSRCKSGPMNILAVVPLRGRKDLLV"
XX
SQ   Sequence 2579 BP; 660 A; 577 C; 595 G; 747 T; 0 other;
     accggatggc cgcgcgattt tttttattgg gcctttcttt aatgggcttt aatttggccc        60
     aatcatagtc tccttgacaa ccctaaataa atgaaaatac tttggcgcta agttattctc       120
     tatctataaa ttaaagcctc ttggcccact ctctttaact caaaatgcct aagcgtgatg       180
     ctccatggcg ttcaatggcg ggaacctcaa aggttagccg caacgctaat tactctcccc       240
     gtgcaggaat tgggccaaga ataaacaagg ccgctgaatg ggttaacagg cccatgtaca       300
     ggaagcccag gatatatcgt actctgagaa cgcccgacgt tccaagaggc tgtgaagggc       360
     cttgtaaggt ccagtcattc gagcagcgac atgacatctt acacactggc aaagtaattt       420
     gcatatctga cgttacccgt ggtaacggta ttactcaccg tgtcgggaag cggttttgtg       480
     ttaagtccgt ctacatactg ggtaagatat ggatggacga gaacatcaag ctcaagaacc       540
     acaccaacag cgtcatgttc tggctggtca gagaccgaag accgtatgga acgcccatgg       600
     atttcggaca agtgttcaac atgttcgaca acgagcctag caccgccaca attaagaacg       660
     atcttcgtga tcgttatcag gtcatgcata ggttctatgg caaggtgaca ggcggacagt       720
     atgccagcaa cgagcaggct attgtcaggc ggttctggaa ggtcaacaac cacgtggtct       780
     acaatcacca ggaagctgcc aagtacgaga accataccga gaatgcccta ttattgtaca       840
     tggcatgtac tcatgcctca aaccctgtat atgcaacgct taagattcgg atctattttt       900
     atgattcgat cttaaattaa taaagtttta attttattga atgattttca agtacataat       960
     ttacatatga tctatctgtt gcaaaacgaa cagctctaat tacattgtta atggaaataa      1020
     cacctaactg atctaagtac ataatgacta actgtctaaa cctagctaaa taagtcgacc      1080
     cagaagctgt catcgatgtc gtccagactt ggaagttcag gtaggctttg tggagatcca      1140
     acgctctcct gaggttgtga ttgaaccgga cttggacgtt gtatatcctg gttctggtgt      1200
     atagtatgtc ctctactcgg tttatcttga aatagagggg attttctatc tcccagataa      1260
     acacgccatt ctctgcctga cgtgcagtga tgagctcccc tgtgcgtgaa tccatgtcct      1320
     gcgcaatcta tgtggaagta tatggagcaa ccgcaatcta agtcaatgcg tctcctcctg      1380
     atggccctcc tcttagcttg cctgtgcgcc ttcttgatag aggggggctg tgagggtgat      1440
     gaagaccgca ttcttgagag tccagttttt gagagacgca ttatctattt tctcgaggaa      1500
     agctttatag ctggaaccct caccaggatt gcaaagcacg attgctggta tgccaccttt      1560
     aatttgaaca ggctttccgt acttgcaatt tgattgccaa tctttttggg cccccagcaa      1620
     ttctttccag tgctttagct ttagatattg cggtgcgacg tcatctatga cgttatactg      1680
     cacgtcgttt gaatagaccc tattattgaa gtccaggtgt ccactcaagt aattatgtgg      1740
     gcctaacgca cgcgcccaca tcgtcttccc cgttcgagag tcaccctcga cgattatact      1800
     aataggtctt tccggccgcg cagcggaact acggccaaaa tattcatcgg cccactcttg      1860
     catctgctca ggcacgttag tgaacgagga gagttgaaac ggaggaatcc atggttccgg      1920
     agctctggca aatattttgg ccgcatttgc aaccagattg tgatgctgaa ggaaaaagtg      1980
     ttgtggttgt tcctccttaa taatttgcag agcttcggcg gcagatgcag cattcaacgc      2040
     cttggcatat gtatcgttaa ctgactgttg acctcctcta gcagatctgc cgtcgatctg      2100
     gaattctccc cattcaattg aatctccgtc cttgtcgata taggacttga cgtcggagct      2160
     cgatttagct ccctgtatgt tcggatggaa atgtgttgac ctggttgggg agaccagatc      2220
     gaagaatctg ttattcgtgc actgatattt accttcgaac tggacaagca cgtggagatg      2280
     aggttcccca ttctcgtgca attctctgca aatcttgatg aatttcttgt tagtcggagt      2340
     gtttaggttt tgtagttggg aaagtgcctc ttctttgcta agagagcatt tgggatatgt      2400
     gaggaaatag tttttagagt taattctaaa gcgtttgggt ggcatttttg taataaaggc      2460
     tgtgtacacc gattggagct ctctcaaact tactcattca atcggtgtat tggggtacta      2520
     tatatactat aaccctcatt agaggatctt gacacgtggc ggccatccgc tataatatt       2579
//