ID   FR837956; SV 1; linear; genomic RNA; STD; VRL; 1368 BP.
XX
AC   FR837956;
XX
DT   16-SEP-2011 (Rel. 110, Created)
DT   16-SEP-2011 (Rel. 110, Last updated, Version 1)
XX
DE   Potato virus Y partial polyprotein gene, helper component proteinase
DE   region, genomic RNA, isolate Nevski
XX
KW   .
XX
OS   Potato virus Y
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1368
RA   Ala-Poikela M.S.;
RT   ;
RL   Submitted (07-MAR-2011) to the INSDC.
RL   Ala-Poikela M.S., PO BOX 27, Department of Agricultural Sciences, 000 14,
RL   University of Helsinki, FINLAND.
XX
RN   [2]
RA   Luolaja J., Raennaeli M., Tian Y., Valkonen J.P.T.;
RT   "Characterisation of Potato virus Y (PVY) in seed potato in Finland";
RL   Unpublished.
XX
DR   MD5; a09355d4f005a16cbb66d80305850551.
DR   EuropePMC; PMC3126533; 21525344.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1368
FT                   /organism="Potato virus Y"
FT                   /lab_host="Solanum tuberosum"
FT                   /isolate="Nevski"
FT                   /serotype="N"
FT                   /mol_type="genomic RNA"
FT                   /country="Finland"
FT                   /db_xref="taxon:12216"
FT   CDS             <1..>1368
FT                   /product="polyprotein"
FT                   /db_xref="GOA:G2ZHC9"
FT                   /db_xref="InterPro:IPR001456"
FT                   /db_xref="InterPro:IPR031159"
FT                   /db_xref="InterPro:IPR042308"
FT                   /db_xref="UniProtKB/TrEMBL:G2ZHC9"
FT                   /protein_id="CCA30563.1"
FT                   /translation="SSAESFWKGLDGNWAQMRYPTDHTCVAGLPVEDCGRVAAIMTHSI
FT                   LPCYKITCPTCAQQYANLPASDLLKILHKHASDGLNRLGADKDRFVHVKKFLTILEHLT
FT                   EPVDLSLEIFNEVFKSIGEKQQSPFKNLNILNNFFLKGKENTAREWQVAQLSLLELARF
FT                   QKNRTDNIKKGDISFFRNKLSAKANWNLYLSCDNQLDKNANFLWGQREYHAKRFFSNYF
FT                   EEIDPAKGYSAYENRLHPNGTRKLAIGNLIVPLDLAEFRRKMKGDYKRQPGVSKKCTSS
FT                   KDGNYVYPCCCTTLDDGSAVESTFYPPTKKHLVIGNSGDQKYVDLPKGNSEMLYIARQG
FT                   FCYINIFLAMLINISEEDAKDFTKKVRDMCVPKLGTWPTMMDLATTCAQMKIFYPDVHD
FT                   AELPRILVDHETQTCHVVDSFGSQTTGYHILKASSVSQLILFANDELESDIKHYRVG"
FT   mat_peptide     <1..1368
FT                   /gene="pol"
FT                   /product="helper component proteinase HCpro"
XX
SQ   Sequence 1368 BP; 435 A; 251 C; 313 G; 369 T; 0 other;
     tcaagcgctg aaagcttttg gaagggattg gacggcaatt gggcacaaat gagatatcct        60
     acagatcata catgtgtggc aggcttacca gttgaggact gtggcagagt tgcagcgata       120
     atgacacaca gtattttacc gtgctataag ataacctgcc ctacctgtgc ccaacaatat       180
     gccaacttgc cagccagtga cttacttaag atattacaca agcacgcaag tgatggttta       240
     aatcgattgg gggcagacaa agatcgcttt gtgcatgtca aaaagttctt gacaatctta       300
     gagcacttaa ctgaaccggt tgatctgagt ctagaaattt tcaatgaagt attcaagtct       360
     ataggggaga agcaacaatc acctttcaaa aacctgaata ttctgaataa tttctttttg       420
     aaaggaaagg aaaatacagc tcgtgaatgg caggtggctc aattaagctt acttgaattg       480
     gcaagattcc aaaagaacag aacggataat atcaagaaag gagacatctc gttctttagg       540
     aataaactat ctgccaaagc aaattggaac ttgtatctgt catgtgataa ccagctggat       600
     aagaatgcaa acttcctgtg gggacagaga gaatatcatg ctaagcgatt tttctcgaac       660
     tatttcgagg aaattgatcc agcgaagggc tattcagcat acgaaaatcg tttgcatccg       720
     aatgggacaa gaaaacttgc aattggaaac ctaattgtac cacttgatct ggctgagttt       780
     aggcggaaga tgaaaggtga ttataaaaga cagccagggg tgagtaagaa gtgcacgagc       840
     tcgaaggatg gaaactacgt gtatccctgt tgttgcacta cacttgatga tggctcagct       900
     gttgaatcaa cattttaccc gccaactaag aagcacctcg taataggtaa tagtggcgat       960
     caaaagtatg ttgacttacc aaaagggaat tctgagatgt tatatattgc caggcaaggt      1020
     ttctgttaca ttaacatttt cctcgcgatg ttgattaaca ttagtgagga agatgcaaag      1080
     gatttcacta agaaggttcg tgacatgtgt gtgccaaagc ttggaacctg gccaaccatg      1140
     atggatctgg ctacaacttg tgctcaaatg aaaatattct accctgatgt tcatgatgca      1200
     gaactgccta gaatactagt cgatcacgaa acgcagacat gccatgtggt tgactcgttt      1260
     ggctcacaaa caactgggta tcatattttg aaagcatcta gcgtgtccca acttattttg      1320
     tttgctaatg atgagttgga gtctgacatt aagcactata gagttggt                   1368
//