ID   FR837933; SV 1; circular; genomic DNA; STD; VRL; 2758 BP.
XX
AC   FR837933;
XX
DT   14-MAR-2011 (Rel. 108, Created)
DT   14-MAR-2011 (Rel. 108, Last updated, Version 1)
XX
DE   Cotton leaf curl Burewala virus complete genome, clone MV14A
XX
KW   complete genome.
XX
OS   Cotton leaf curl Burewala virus
OC   Viruses; Geminiviridae; Begomovirus; unclassified Begomovirus.
XX
RN   [1]
RP   1-2758
RA   Ilyas M.;
RT   ;
RL   Submitted (05-MAR-2011) to the INSDC.
RL   Ilyas M., School of Biological Sciences, University of the Punjab (New
RL   Campus), Lahore, 54590, PAKISTAN.
XX
RN   [2]
RA   Muhammad I., Haider M.S.;
RT   "Diversity of cotton-infecting begomoviruses in Pakistan";
RL   Unpublished.
XX
DR   MD5; 8b961d1691afd81f2e5371f4feeae831.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2758
FT                   /organism="Cotton leaf curl Burewala virus"
FT                   /host="Gossypium hirsutum"
FT                   /mol_type="genomic DNA"
FT                   /country="Pakistan:Fortabas, Bahawalnagar"
FT                   /isolation_source="host leaf"
FT                   /collected_by="Muhammad Ilyas"
FT                   /clone="MV14A"
FT                   /db_xref="taxon:620894"
FT   CDS             132..488
FT                   /gene="v2"
FT                   /product="V2 protein"
FT                   /db_xref="GOA:D3HIQ8"
FT                   /db_xref="InterPro:IPR002511"
FT                   /db_xref="InterPro:IPR005159"
FT                   /db_xref="UniProtKB/TrEMBL:D3HIQ8"
FT                   /protein_id="CCA30525.1"
FT                   /translation="MWDPLLNEFPDTVHGFRCMLAVKYLQLVEKTYSPDTLGYDLIRDL
FT                   ILVIRARNYVEATSRYNHFHARFEGTPPSQLRQPICEPCCCPHCPRHQSKSMGEQAHEQ
FT                   KAQDVQDVQKSRCS"
FT   CDS             292..1062
FT                   /gene="v1"
FT                   /product="coat protein"
FT                   /db_xref="GOA:F0X3D5"
FT                   /db_xref="InterPro:IPR000263"
FT                   /db_xref="InterPro:IPR000650"
FT                   /db_xref="UniProtKB/TrEMBL:F0X3D5"
FT                   /protein_id="CCA30526.1"
FT                   /translation="MSKRPVDIIISTPASKVRRRLNFDSPYVSRAAAPIVRVTKAKAWA
FT                   NRPMNRKPRMYRMYRSPDVPRGCEGPCKVQSFESRHDIQHIGKVMCVSDVTRGTGLTHR
FT                   VGKRFCVKSVYVLGKIWMDENIKTKNHTNSVMFFLVRDRRPVDKPQDFGEVFNMFDNEP
FT                   STATVKNVHRDRYQVLRKWYATVTGGQYASKEQALVKKFIRVNNYVVYNQQEAGKYENH
FT                   SENALMLYMACTHASNPVYATLKIRIYFYDSVTN"
FT   CDS             complement(1059..1463)
FT                   /gene="c3"
FT                   /product="replication enhancer protein"
FT                   /db_xref="GOA:D3HIR1"
FT                   /db_xref="InterPro:IPR000657"
FT                   /db_xref="UniProtKB/TrEMBL:D3HIR1"
FT                   /protein_id="CCA30527.1"
FT                   /translation="MDSRTGEPITAAQAGNGAYIWEVPNPLYFKIISHVNRPFTTNMDI
FT                   LTIRIQFNHNLRKALGIHKCFIAFRIWMTSQPPTGRFLRVFRTQVLKYLNNLGIVSINN
FT                   VVRAVDHVLWNVLQHVVFVDQSSSIKFNIY"
FT   CDS             complement(1534..2595)
FT                   /gene="c1"
FT                   /product="replication assciated protein"
FT                   /db_xref="GOA:F0X3D7"
FT                   /db_xref="InterPro:IPR001191"
FT                   /db_xref="InterPro:IPR001301"
FT                   /db_xref="InterPro:IPR022690"
FT                   /db_xref="InterPro:IPR022692"
FT                   /db_xref="UniProtKB/TrEMBL:F0X3D7"
FT                   /protein_id="CCA30528.1"
FT                   /translation="MALPKRFKVQAKNYFITYPQCSLTKEEALSQIQAINTPSNKKYIK
FT                   LCRELHEDGSPHLHVLIQFKGKFVCTNNRFFDLVSPTGSAHFHPNIQGAKSSSDVKAYI
FT                   DKDGDTLEWGEFQIDGRSARGGQQTANDAYAAALNAGSKSEALRVIKELAPKDFVLQFH
FT                   NLNANLDRIFQEPPAPYISPFSPSSFDQVPEELEVWAIDNVVDAAARPLRPRSIVIEGD
FT                   SRTGKTMWARSLGPHNYLCGHLDMSPKVYSNDAWYNVIDDVDPHFLKHFKEFMGAQRDW
FT                   QSNTKYGKPVQIKGGIPTIFLCNPGPNSSYTEFLNEEKNTALKNWALKNAIFITLEGPL
FT                   YSASNQSTTQGSE"
FT   CDS             complement(2241..2681)
FT                   /gene="c4"
FT                   /product="C4 protein"
FT                   /db_xref="InterPro:IPR002488"
FT                   /db_xref="UniProtKB/TrEMBL:E7BBJ9"
FT                   /protein_id="CCA30529.1"
FT                   /translation="MPFGDTINCIQSPIPRVKAHQLSLIDQSQWLYPNVLKYKPKIISS
FT                   LIHSAHLLKRKHFPKFKPSTHPRIKNTSNSAESYTKMGALISMCSSSSRANSSAQITDS
FT                   STWYPQPGQHISIRTFRELNQAQMSRPTSTRTGTLSSGESFR"
XX
SQ   Sequence 2758 BP; 720 A; 540 C; 647 G; 851 T; 0 other;
     accggatggc cgcgcgattt ttttgtgggc cctaccatta actcttgtcg gcaaatcata        60
     tgacgcgctc aaagcttaaa taattctccc gcctattata agtacttcgt tgctaagtat       120
     gcgtttgaaa aatgtgggat ccactgttaa atgagttccc cgacaccgtt cacggtttta       180
     ggtgtatgtt agcagttaaa tatttgcagt tagtagagaa aacttactct cctgatacat       240
     tgggttacga tttgataagg gatttaatcc tggtaataag ggctaggaat tatgtcgaag       300
     cgaccagtag atataatcat ttccacgccc gcttcgaagg tacgccgccg tctcaacttc       360
     gacagcccat atgtgagccg tgctgctgcc cccattgtcc gcgtcaccaa agcaaaagca       420
     tgggcgaaca ggcccatgaa cagaaagccc aggatgtaca ggatgtacag aagtccagat       480
     gttcctagag gatgtgaagg tccatgtaag gttcagtcgt ttgagtccag acatgatatt       540
     cagcatatag gtaaagtaat gtgtgttagt gatgttactc gtggtactgg gctgacccat       600
     agagttggta agagattttg tgttaagtct gtttatgtgt tgggtaagat ctggatggat       660
     gagaacatta agacgaagaa tcacacgaat agtgtgatgt ttttcttggt tagagatcgt       720
     agacctgttg ataaacctca agattttgga gaggtattta atatgtttga taatgagccc       780
     agtacggcga ctgtgaagaa tgttcatcgt gataggtatc aagttctgcg caaatggtat       840
     gcaactgtca ccggtggaca atacgcttca aaggaacaag ctctcgtgaa gaaatttatt       900
     agagttaata attatgttgt gtataaccag caggaagctg gcaagtatga gaatcattct       960
     gagaatgctt taatgttgta tatggcgtgt actcacgcct ctaacccagt gtatgctacc      1020
     ttgaagatac ggatctactt ctatgattcc gtgacaaatt aataaatatt gaattttatt      1080
     gaagatgatt ggtctacaaa tacaacatgt tgtaatacat tccataatac atgatcaact      1140
     gctctaacta cattattaat actgacaatt cctaagttat ttaaatattt tagcacttga      1200
     gtcctaaaga cccttaagaa acgaccagtc ggaggctgtg aggtcatcca gattcggaaa      1260
     gctatgaaac atttgtgtat ccccaacgct ttcctcaggt tgtgattgaa ctggatcctg      1320
     atcgtgagta tatccatatt cgtcgtgaat ggacggttga cgtggctgat gatcttgaaa      1380
     tagaggggat ttggaacttc ccagatatat gcgccattcc ctgcttgagc tgcagtgatg      1440
     ggttcccctg tgcgtgaatc catggttgtg gcagttgatt gacagataat aagaacaccc      1500
     gcattcaaga tctactctcc tcctcctgtt gcgttattcg cttccctgtg ttgtactttg      1560
     attggaagct gagtacagtg gtccttcgag agtgatgaag attgcatttt ttaaggccca      1620
     attctttaat gctgtgtttt tttcctcgtt gaggaattcc gtataactgc tgttcggacc      1680
     aggattgcac aggaagattg tcggtatccc gcctttaatt tgaactggct ttccgtattt      1740
     tgtgttggac tgccagtctc tttgggcccc catgaactct ttaaagtgtt tgaggaaatg      1800
     cgggtcgacg tcatcaatga cgttgtacca ggcgtcgtta ctgtatactt tgggactcat      1860
     gtctagatgt ccgcacaaat agttatgtgg tcccaatgat ctagcccaca tcgtcttccc      1920
     cgttcgacta tctccctcaa ttactatact ccgaggtcta aggggccgcg cagcggcatc      1980
     gacaacgtta tcgatggccc aaacttcaag ttcttctgga acttgatcga aagaagaagg      2040
     agaaaaagga gaaatatagg gagccggtgg ctcctgaaag attctgtcta gatttgcatt      2100
     taaattatga aattgtagta caaaatcttt aggagctagt tccttaatga ctctaagagc      2160
     ctctgactta ctgcctgcgt taagtgctgc ggcgtaagcg tcgttggctg tctgctgtcc      2220
     tcctcttgct gatcttccat ctatctgaaa ctctccccac tcgagagtgt ccccgtcctt      2280
     gtcgatgtag gccttgacat ctgagcttga tttagctccc tgaatgttcg gatggaaatg      2340
     tgctgacccg gttggggata ccaggtcgaa gaatctgtta tttgtgcaga cgaatttgcc      2400
     cttgaactgg atgagcacat ggagatgagg gctcccatct tcgtgtaact ctctgcagag      2460
     tttgatgtat tttttattcg agggtgtgtt gatggcttga atttgggaaa gtgcttcctc      2520
     tttagtaagt gagcactgtg gataagtgat gaaataattt ttggcttgta ctttaaaacg      2580
     tttgggtaga gccattgact ttggtcaatt agagacaact gatgggcttt tactctggga      2640
     attggagact ggatacaatt tatagtgtct ccaaatggca tattttgtaa ataactagaa      2700
     gttcgtttga aattcaaatt cccctttggg ctccaaaagc ggccatccgt ataatatt        2758
//