Dbfetch

Dbfetch

ID   FR828282; SV 1; linear; genomic RNA; STD; VRL; 561 BP.
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AC   FR828282;
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DT   28-FEB-2012 (Rel. 111, Created)
DT   27-AUG-2014 (Rel. 121, Last updated, Version 2)
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DE   Wheat yellow mosaic virus partial gene for polyprotein, VPg protein region,
DE   isolate SD3 clone 31, genomic RNA
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KW   .
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OS   Wheat yellow mosaic virus
OC   Viruses; Riboviria; Potyviridae; Bymovirus.
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RN   [1]
RP   1-561
RA   Adams M.;
RT   ;
RL   Submitted (22-FEB-2011) to the INSDC.
RL   Department of Plant Pathology and Microbiology, Rothamsted Research,
RL   Harpenden, Herts AL5 2JQ, UNITED KINGDOM.
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RN   [2]
RX   DOI; 10.1094/PHYTO-01-13-0013-R.
RX   PUBMED; 23550972.
RA   Sun B.J., Sun L.Y., Tugume A.K., Adams M.J., Yang J., Xie L.H., Chen J.P.;
RT   "Selection pressure and founder effects constrain genetic variation in
RT   differentiated populations of soilborne bymovirus Wheat yellow mosaic virus
RT   (Potyviridae) in China";
RL   Phytopathology 103(9):949-959(2013).
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DR   MD5; 34b7a811a871e21e0f8e12a119dbbeca.
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FH   Key             Location/Qualifiers
FH
FT   source          1..561
FT                   /organism="Wheat yellow mosaic virus"
FT                   /segment="RNA1"
FT                   /isolate="SD3"
FT                   /mol_type="genomic RNA"
FT                   /collection_date="2009"
FT                   /clone="31"
FT                   /db_xref="taxon:75746"
FT   CDS             <1..>561
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /product="polyprotein"
FT                   /db_xref="UniProtKB/TrEMBL:H6RYX8"
FT                   /protein_id="CBZ99189.1"
FT                   /translation="GKGNKYRPREDARLMYSTRDDATFDTWNEKAKEKRKKISDRAEPE
FT                   MKQPYQKRPYYNFYDLQTDSNILEAIFYTTEGDEFFRTANPNKDMHSVAEKLKAFLDTK
FT                   PIIGRHQRQLLEETAQVVIKDDKGTAHRMDISTHNPNTLKNNGSGRVGYDEHRGDFRQE
FT                   SPALESPYELEAEFGNSKDEVMLE"
FT   mat_peptide     1..561
FT                   /product="VPg protein"
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SQ   Sequence 561 BP; 199 A; 139 C; 128 G; 95 T; 0 other;
     ggaaagggaa acaagtatcg accacgagag gacgcacgtc tgatgtactc cacgagagac        60
     gacgcaacct tcgatacatg gaacgagaaa gctaaggaga aaaggaagaa gatatcagac       120
     cgcgcagagc cagagatgaa acaaccttac cagaagcgtc catactataa cttctacgac       180
     cttcaaactg atagcaacat tctcgaggca atattctaca ccacggaagg tgacgaattc       240
     ttccggacgg caaatcccaa caaggacatg cactcagtag ctgaaaaact aaaagccttc       300
     cttgacacaa aaccaatcat aggcagacac cagcgccagc tccttgagga aaccgctcag       360
     gtcgttatca aagacgacaa aggcactgcc cacagaatgg acatatcaac ccacaaccct       420
     aacactctta agaacaatgg atcaggaaga gttgggtatg atgagcatcg cggcgatttc       480
     aggcaagaaa gccctgcact tgagtcaccg tacgagttgg aagctgaatt cggaaactca       540
     aaggatgaag tcatgcttga a                                                 561
//