Dbfetch

Dbfetch

ID   FR827959; SV 1; linear; genomic RNA; STD; VRL; 879 BP.
XX
AC   FR827959;
XX
DT   28-FEB-2012 (Rel. 111, Created)
DT   27-AUG-2014 (Rel. 121, Last updated, Version 2)
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DE   Wheat yellow mosaic virus partial gene for polyprotein, coat protein
DE   region, isolate HB3 clone 21, genomic RNA
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KW   .
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OS   Wheat yellow mosaic virus
OC   Viruses; Riboviria; Potyviridae; Bymovirus.
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RN   [1]
RP   1-879
RA   Adams M.;
RT   ;
RL   Submitted (22-FEB-2011) to the INSDC.
RL   Department of Plant Pathology and Microbiology, Rothamsted Research,
RL   Harpenden, Herts AL5 2JQ, UNITED KINGDOM.
XX
RN   [2]
RX   DOI; 10.1094/PHYTO-01-13-0013-R.
RX   PUBMED; 23550972.
RA   Sun B.J., Sun L.Y., Tugume A.K., Adams M.J., Yang J., Xie L.H., Chen J.P.;
RT   "Selection pressure and founder effects constrain genetic variation in
RT   differentiated populations of soilborne bymovirus Wheat yellow mosaic virus
RT   (Potyviridae) in China";
RL   Phytopathology 103(9):949-959(2013).
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DR   MD5; 52889ffca6c1f8cfc0bd3ff0f0a5c8c9.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..879
FT                   /organism="Wheat yellow mosaic virus"
FT                   /segment="RNA1"
FT                   /isolate="HB3"
FT                   /mol_type="genomic RNA"
FT                   /collection_date="2009"
FT                   /clone="21"
FT                   /db_xref="taxon:75746"
FT   CDS             <1..>879
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:H6RY05"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:H6RY05"
FT                   /protein_id="CBZ98866.1"
FT                   /translation="AADTQTDAQKEEARLAAATKKAADDADAARLRKVEADRVEAARVK
FT                   KASDDKKARDLTATKVDDGKIVADAGTKRTNAATKEKWSLPETKPVNAGLKLRISMDKL
FT                   KSAPKSIVEHDNSIALDSEVKKWSDAVRTSLGITTDEAWINALIPFLGWCANSGASDKH
FT                   AENQTMQVDNGTGALTEMSLSPFIVHARLNGGLRRILRAYSDETVLLLQEHKIVTKWAM
FT                   KHGASAHAAYAFDFFVPRPWMNPQDIEVAKQARLAALGTGTYNTMLTSDTTNLRKTTNR
FT                   RVLDTDGHPELT"
FT   mat_peptide     1..879
FT                   /product="coat protein"
XX
SQ   Sequence 879 BP; 264 A; 240 C; 215 G; 160 T; 0 other;
     gcagctgaca cacaaacaga cgcgcagaag gaggaagctc ggctggcagc cgccaccaag        60
     aaggcagccg atgatgccga cgctgcgcgt cttcgcaagg ttgaggcaga tcgtgttgag       120
     gccgcaagag tgaagaaagc gagcgatgac aagaaagcca gggacctcac agcaaccaag       180
     gttgatgatg gcaaaattgt tgccgacgct ggaacaaaaa ggaccaatgc cgccaccaaa       240
     gagaaatggt cacttccaga aacaaaaccc gtcaacgcag gactaaagct tcgaatctca       300
     atggacaaat taaagagcgc acccaaatct atagtcgaac acgacaactc catcgctcta       360
     gattcagaag ttaagaagtg gtcagacgct gtacggacca gtcttggcat cactacggat       420
     gaggcatgga ttaatgccct cattcccttc ctcggatggt gcgccaacag tggcgcttca       480
     gacaaacacg cagaaaacca gaccatgcaa gttgataatg gaactggagc tttaaccgag       540
     atgagtctct ccccattcat tgttcacgct aggttgaatg gtggcttgag acggatcctg       600
     cgagcctaca gtgatgaaac tgtgctcctc cttcaggaac acaagattgt cacaaaatgg       660
     gctatgaaac acggcgcatc cgcacacgcc gcgtacgctt ttgacttctt tgtcccccgc       720
     ccgtggatga acccacagga catcgaagtt gcgaaacaag cacgtcttgc tgctttaggc       780
     acaggtacat acaataccat gcttacctcc gacacaacca acctccgcaa gacaaccaac       840
     cgcagggttc tggatactga tggacaccca gaactaacc                              879
//