ID   FR823303; SV 1; linear; genomic RNA; STD; VRL; 1718 BP.
XX
AC   FR823303;
XX
DT   22-JUN-2011 (Rel. 109, Created)
DT   03-FEB-2012 (Rel. 111, Last updated, Version 2)
XX
DE   Raspberry leaf blotch virus segment RNA5, complete genome
XX
KW   complete genome; complete viral segment.
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OS   Raspberry leaf blotch emaravirus
OC   Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Ellioviricetes;
OC   Bunyavirales; Fimoviridae; Emaravirus.
XX
RN   [1]
RP   1-1718
RA   MacFarlane S.A.;
RT   ;
RL   Submitted (18-FEB-2011) to the INSDC.
RL   MacFarlane S.A., Scottish Crop Research Institute, Plant Pathology,
RL   Invergowrie, Dundee, DD2 5DA, UNITED KINGDOM.
XX
RN   [2]
RX   PUBMED; 22049090.
RA   McGavin W.J., Mitchell C., Cock P.J., Wright K.M., Macfarlane S.A.;
RT   "Raspberry leaf blotch virus, a putative new member of the genus
RT   Emaravirus, encodes a novel genomic RNA";
RL   J. Gen. Virol. 93(Pt 2):430-437(2012).
XX
DR   MD5; 386ecac068273fd51a4b5429e0f38180.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1718
FT                   /organism="Raspberry leaf blotch emaravirus"
FT                   /segment="RNA5"
FT                   /mol_type="genomic RNA"
FT                   /country="United Kingdom:Tayside"
FT                   /isolation_source="Red Raspberry"
FT                   /collected_by="W. McGavin"
FT                   /note="segmented negative strand RNA plant virus"
FT                   /db_xref="taxon:1980431"
FT   CDS             complement(221..1651)
FT                   /transl_table=1
FT                   /gene="P5"
FT                   /product="P5 protein"
FT                   /db_xref="UniProtKB/TrEMBL:F8K9Z1"
FT                   /protein_id="CBZ42028.1"
FT                   /translation="MAPYRVIPLCHKYSDEDRKIRLTLNSKNLTVKQQRKLSWDRLKIM
FT                   FDNDHAHGINESFDSELYSGCFITYYNPEIVSEFILNDMYPPKKLFFEPRSGKSACLYV
FT                   DKIQNAILNAAICTAIVDNYQNYNPDDDFIVEGHVRCNVNTLRFIFYYAVDMEDGVSYI
FT                   KKNFESILKSTVYNSCISVMTSENMMNLKNFYYDQVVNTRRESMETFLFKTRFDILPSI
FT                   LPQMLDLELLKMSEDLYKEFMTYIDIYHSDDRFQFIENLKDEDFSKTHVAKFMTIYKKK
FT                   MEDSEIEKKARRDDEYLPNYMDSTLNDFYCYKVPMPCSYENEIKDDINKMIESEDDITR
FT                   VSYNTSFLVPVSLRKKVYNEMIRKNNTVKMNNMHLYYLSAMVMEFQDNNNFFEETKCLR
FT                   HSVHILQNMAKRTYKYIKDNLYKKIAQAKKSNLFIQAVDFTNIMLVQEVAEKHYKDLLK
FT                   PKLLNDDTVFDNFSSDSE"
XX
SQ   Sequence 1718 BP; 544 A; 291 C; 228 G; 655 T; 0 other;
     agtagtgttc tcccttaaaa ctgaatttct ataaccatca aaacacaatc taataaatat        60
     aaggtacaaa ctgtcgactt gctttatgta tatatttacc agatagcaaa tatatcataa       120
     agtaaatctg atcagtgtta tagatattta ataaatataa taaatttaaa ataataatat       180
     aaatagaaca ataatagatc ttattacaat gattgcaaac ctattcagaa tcactcgaga       240
     aattgtcaaa aacagtatca tcattcaaca actttggttt taataagtcc ttgtaatgtt       300
     tctctgccac ttcttgaact aacattatgt tagtaaaatc aactgcttgt atgaataaat       360
     tactcttctt agcttgggct atctttttgt ataaattatc ttttatgtac ttatatgttc       420
     tttttgccat gttttgtaat atatgtacag aatgcctcaa acattttgtt tcttcaaaaa       480
     aattgttgtt atcctgaaat tccatgacca tggctgataa atagtatagg tgcatattgt       540
     tcatcttaac tgtgttgttc tttctgatca tttcattgta cactttcttt cttagtgata       600
     caggtactaa aaatgaagtg ttatatgaga ctcttgttat atcatcttca gactcaatca       660
     ttttatttat atcatctttt atttcatttt cataactaca aggcattggc actttatagc       720
     aataaaaatc atttagtgtt gaatccatat agttcggtag atattcatca tctcttcttg       780
     ctttcttttc tatttctgaa tcttccattt tcttcttgta gatggtcata aatttcgcaa       840
     catgggtttt actgaagtct tcatctttaa gattctcaat gaattgaaat ctatcatcac       900
     tatgataaat gtcaatatat gtcatgaatt ccttatacaa atcttcactc atttttaata       960
     attccaaatc aagcatctga ggtaatatgc taggtaatat atcaaatcta gtcttgaata      1020
     aaaatgtctc catgctttct ctcctagtgt tgactacttg atcataatag aaattcttaa      1080
     ggttcatcat attctcactg gtcataacag atatgcaaga gttgtaaacc gttgatttca      1140
     gtatgctttc aaaattcttt ttgatatatg aaactccatc ttccatgtca acagcatagt      1200
     aaaatataaa ccttaatgtg ttaacattac acctaacatg accttcaaca atgaaatcat      1260
     catcagggtt gtagttctga taattatcca ctatagcagt gcagatagca gcattcaata      1320
     tagcattctg aattttatca acataaagac atgctgattt tccactccta ggttcaaaga      1380
     atagcttctt tggtggatac atatcattta gaatgaattc tgagactatc tcaggattgt      1440
     aatatgtgat aaagcaacct gaatacaact cagagtcaaa tgattcattg attccatgtg      1500
     catgatcatt gtcaaacatt atcttcaatc tgtcccatga taacttcctc tgctgtttca      1560
     ccgttaggtt cttagagttc aatgtcaatc ttatcttcct atcttcatca ctatatttgt      1620
     gacataaagg gatgactctg tatggtgcca tattgccttc tcttggataa atttgtctgg      1680
     ttttgtctgg ttgttagttt ttaagggagt tcactact                              1718
//