ID   FR823301; SV 1; linear; genomic RNA; STD; VRL; 1365 BP.
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AC   FR823301;
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DT   22-JUN-2011 (Rel. 109, Created)
DT   03-FEB-2012 (Rel. 111, Last updated, Version 2)
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DE   Raspberry leaf blotch virus segment RNA3, complete genome
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KW   complete genome; complete viral segment.
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OS   Raspberry leaf blotch emaravirus
OC   Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Ellioviricetes;
OC   Bunyavirales; Fimoviridae; Emaravirus.
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RN   [1]
RP   1-1365
RA   MacFarlane S.A.;
RT   ;
RL   Submitted (18-FEB-2011) to the INSDC.
RL   MacFarlane S.A., Scottish Crop Research Institute, Plant Pathology,
RL   Invergowrie, Dundee, DD2 5DA, UNITED KINGDOM.
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RN   [2]
RX   PUBMED; 22049090.
RA   McGavin W.J., Mitchell C., Cock P.J., Wright K.M., Macfarlane S.A.;
RT   "Raspberry leaf blotch virus, a putative new member of the genus
RT   Emaravirus, encodes a novel genomic RNA";
RL   J. Gen. Virol. 93(Pt 2):430-437(2012).
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DR   MD5; eec61e52690d185abd7997163f630eba.
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FH   Key             Location/Qualifiers
FH
FT   source          1..1365
FT                   /organism="Raspberry leaf blotch emaravirus"
FT                   /segment="RNA3"
FT                   /mol_type="genomic RNA"
FT                   /country="United Kingdom:Tayside"
FT                   /isolation_source="Red Raspberry"
FT                   /collected_by="W. McGavin"
FT                   /note="segmented negative strand RNA plant virus"
FT                   /db_xref="taxon:1980431"
FT   CDS             complement(434..1312)
FT                   /transl_table=1
FT                   /gene="NC"
FT                   /product="nucleocapsid"
FT                   /function="viral ribonucleoprotein formation"
FT                   /db_xref="GOA:F8K9Y9"
FT                   /db_xref="UniProtKB/TrEMBL:F8K9Y9"
FT                   /protein_id="CBZ42026.1"
FT                   /translation="MATMSKAGSSNKSENSGSDLKSIVVDGKTYNINDVKDGITKDFNN
FT                   NGNLKAVEPILVNFDQLTTSTDAFNIKECISTSNFQLQTCYKCITNSLAMNNAKKANKV
FT                   QKVQLSDVTYYIVPKVKPGAIKNVISYNRFMAICIAGIRVNLTKKIYDWNKHEYVAANT
FT                   ETLQVPDGVGNKLALSCGMDEGHDLYWFYASGFEYTFDLYPVEVICCVMLRLANAEEFK
FT                   LNKVDDLDLVKNLASQIGKKGQIDDVLNSIGIDTISEAYAKYNSTRTDLVSVKRIKDTL
FT                   SSLQDILKNMK"
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SQ   Sequence 1365 BP; 421 A; 234 C; 180 G; 530 T; 0 other;
     agtagtgttc tcccaataaa ctgactatct taccaaaatc attccaaatt ccaacatggt        60
     gtaacaaaga gtattaagcg actgtcctct gtcataataa aaccatttta aacctgcttg       120
     acatgaaata gatattatat cagccgaact tttttgacta gtttaactag ccttattttt       180
     ttgatttttt aatatttttt aatttttttg atttttatga ttttttaatt tttttgattt       240
     ttatgatttt ttaatttttt tgattttttc aatttttaat tttttattat tttttgatat       300
     ataataagca ttatctaata tattgaaaca ttaataaaag gtttaaactt acaaaacacc       360
     acaacacact aagcaaagta attatattat taaaacatga cataatatat tgcacttatt       420
     gaacaatatg aacttatttc atattcttca agatatcctg cagtgatgat agggtatcct       480
     ttattctctt aacactaact agatcagttc tagttgagtt gtactttgca taagcttcag       540
     atatagtgtc aatacctata ctatttaaaa catcatctat ctgacctttc tttccaattt       600
     gtgatgctag atttttaact aaatctaaat catcaacttt gttcaatttg aattcttctg       660
     cattagccaa tctaagcatg acacaacaga tcacctccac aggatataga tcaaaagtgt       720
     actcaaatcc acttgcatag aaccaatata gatcatgacc ttcatccata ccacatgaaa       780
     gtgctaattt atttccaaca ccatcaggaa cttgtaatgt ttcagtattt gcagcaacat       840
     actcatgctt gttccaatca tagatcttct tggtaagatt aacccttatt ccagcaatgc       900
     aaattgccat gaacctgttg taagaaatta cattttttat ggcaccaggt ttgactttcg       960
     gcacaatgta ataagtaaca tcacttagct ggactttctg aactttatta gctttcttag      1020
     cattattcat agcaagtgaa ttagtaatac acttgtagca tgtctggagt tgaaagttgc      1080
     ttgtagaaat acattctttt atgttgaatg catcagttga tgtggttaat tgatcaaaat      1140
     tgacaaggat tggttcaact gctttcaaat tgccattatt gttgaaatct tttgttatac      1200
     catctttaac atcattgatg ttatatgtct taccatccac cactatactc ttcaaatcag      1260
     agccactatt ttcgctcttg ttgctggatc ctgctttgct cattgttgcc ataattctgt      1320
     gtttgcaagg tttgaggttg gtagttttat tgggagttca ctact                      1365
//