ID FR819707; SV 1; circular; genomic DNA; STD; VRL; 2756 BP. XX AC FR819707; XX DT 15-NOV-2011 (Rel. 110, Created) DT 15-NOV-2011 (Rel. 110, Last updated, Version 1) XX DE Cotton leaf curl Burewala virus complete viral segment DNA-A, clone DE CLCuBV-Xant XX KW complete viral segment. XX OS Cotton leaf curl Burewala virus OC Viruses; Geminiviridae; Begomovirus; unclassified Begomovirus. XX RN [1] RP 1-2756 RA Amin I.; RT ; RL Submitted (31-JAN-2011) to the INSDC. RL Amin I., Agricultural Biotechnology Division, Nibge, Jhang Road Faisalabad, RL 38000, PAKISTAN. XX RN [2] RA Mubin M., Akhtar S., Amin I., Briddon R.W., Mansoor S.; RT "Xanthium strumarium: a weed host of components of RT begomovirus-betasatellite complexes affecting crops"; RL Virus Genes -:0(2011). XX DR MD5; a0092c34561dc97d7c3dade9c8bb5814. XX FH Key Location/Qualifiers FH FT source 1..2756 FT /organism="Cotton leaf curl Burewala virus" FT /segment="DNA-A" FT /mol_type="genomic DNA" FT /country="Pakistan:Summandri" FT /isolation_source="Xanthium strumarium leaf" FT /clone="CLCuBV-Xant" FT /db_xref="taxon:620894" FT CDS 129..485 FT /gene="av2" FT /product="pre coat protein" FT /db_xref="GOA:D3HIQ8" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:D3HIQ8" FT /protein_id="CBZ39251.1" FT /translation="MWDPLLNEFPDTVHGFRCMLAVKYLQLVEKTYSPDTLGYDLIRDL FT ILVIRARNYVEATSRYNHFHARFEGTPPSQLRQPICEPCCCPHCPRHQSKSMGEQAHEQ FT KAQDVQDVQKSRCS" FT CDS complement(280..804) FT /gene="c5" FT /product="C5 protein" FT /db_xref="InterPro:IPR006892" FT /db_xref="InterPro:IPR013671" FT /db_xref="UniProtKB/TrEMBL:G7ZLG5" FT /protein_id="CBZ39252.1" FT /translation="MNILHSRRTGLIIKHIKYLSKILRFINRSTISNQEKHHTIRVILR FT LNVLIHPDLTQHINRLNTKSLTNSMGQPSTTSNITNTHYFTYMLNIMSGLKPLNLTWTF FT TSSRNIWTSVHPVHPGLSVHGPVRPCFCFGDADNGGSSTAHIWAVEVETAAYLRSGRGN FT DYICWSLRHNS" FT CDS 289..1059 FT /gene="cp" FT /product="Coat Protein" FT /db_xref="GOA:G7ZLG6" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:G7ZLG6" FT /protein_id="CBZ39253.1" FT /translation="MSKRPADIIISTPASKVRRRLNFDSPYVSRAAAPIVRVTKAKAWA FT NRPMNRKPRMYRMYRSPDVPRGCEGPCKVQWFESRHDIQHIGKVMCVSDVTRGTGLTHR FT VGKRFCVKSVYVLGKIWMDENIKTKNHTNSVMFFLVRDRRPVDKPQDFGEVFNMFDNEP FT STATVKNVHRDRYQVLRKWYATVTGGQYASKEQALVKKFIRVNNYVVYNQQEAGKYENH FT SENALMLYMACTHASNPVYATLKIRIYFYDSVTN" FT CDS complement(1056..1460) FT /gene="ren" FT /product="replication enhancer protein" FT /db_xref="GOA:G7ZLG7" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:G7ZLG7" FT /protein_id="CBZ39254.1" FT /translation="MDSRTGEPITAAQAGNGTYIWEVPNPLYFKIISYVNRPFTTNMDI FT LMIRIQFNHNLRKALGIHKCFIAFRIWMTSQPPTGRFLRVFTTQVLKYLNNLGIVSINN FT VVRAVDHVLWNVLQHVVFVDQSSSIKFNIY" FT CDS complement(1502..2593) FT /gene="rep" FT /product="replication associated protein" FT /db_xref="GOA:G7ZLG8" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:G7ZLG8" FT /protein_id="CBZ39255.1" FT /translation="MAPPKRFKVQAKNYFITYPQCSLTKEEALSQIQAINTPSNKKYIK FT LCRELHEDGSPHLHVLIQFEGKFVCTNNRFFDLVSPTRSAHFHPNIQGAKSSSDVKAYI FT DKDGDTLEWGEFQIDGRSAGGGQQTANDAYAAALNAGSKSEALRVIKELAPKDFVLQFH FT NLNANLDRIFQEPPAPYISPFSPSSFDQVPEELEVWAIDNVVDAAARPLRPRSIVIEGD FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHFLKHFKEFMGAQRDW FT QSNTKYGKPVQIKGGIPTIFLCNPGPNSSYNEFLNEGKNTSLKNWALKNATFITLEGPL FT YSASNQSTAQGSEETQQEEESRS" FT CDS complement(1624..1812) FT /gene="trAP" FT /product="transcriptional activator protein" FT /db_xref="UniProtKB/TrEMBL:G7ZLG9" FT /protein_id="CBZ39256.1" FT /translation="MTSTRISSNTLKSSWGPKETGSPTQNTESQFKLKAGYRQSSCAIL FT VRTAVIMNSSTREKTHH" FT CDS complement(2134..2679) FT /gene="c4" FT /product="C4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:G7ZLH0" FT /protein_id="CBZ39257.1" FT /translation="MPFGDNINCIQSPIPRVKAHQLSLIDQSQWLPPNVLKYKPKTISS FT LIHSAHSLKRKHFPKFKPSTHPRIKNISNSAESYTKMGALISMCSSSSRANSSARITDS FT STWYPQPGQHISIRTFRELNQAQMSRPTSTRTGTLSSGESFRSMEDQQEEDSRQPTTLT FT PQHLTQAVSQRLLESLRN" XX SQ Sequence 2756 BP; 720 A; 547 C; 649 G; 840 T; 0 other; accggatggc cgcgcgattt cgtgggccct accattaact cttgtcggcc aatcatatga 60 cgcgctcaaa gcttaaataa ttctcccgcc tattataagt acttcgttgc taagtttgcg 120 tttgaaaaat gtgggatcca ctgttaaatg agttccccga caccgttcac ggttttaggt 180 gtatgttagc agttaaatat ttgcagttag tagagaaaac ttactctcct gatacattgg 240 gttacgattt gataagggat ttaatcctgg taataagggc taggaattat gtcgaagcga 300 ccagcagata taatcatttc cacgcccgct tcgaaggtac gccgccgtct caacttcgac 360 agcccatatg tgagccgtgc tgctgccccc attgtccgcg tcaccaaagc aaaagcatgg 420 gcgaacaggc ccatgaacag aaagcccagg atgtacagga tgtacagaag tccagatgtt 480 cctagaggat gtgaaggtcc atgtaaggtt cagtggtttg agtccagaca tgatattcag 540 catataggta aagtaatgtg tgttagtgat gttactcgtg gtactgggct gacccataga 600 gttggtaaga gattttgtgt taagtctgtt tatgtgttgg gtaagatctg gatggatgag 660 aacattaaga cgaagaatca cacgaatagt gtgatgtttt tcttggttag agatcgtaga 720 cctgttgata aacctcaaga ttttggagag gtatttaata tgtttgataa tgagcccagt 780 acggcgactg tgaagaatgt tcatcgtgat aggtatcaag ttctgcgcaa atggtatgca 840 actgtcaccg gtggacaata cgcttcaaag gaacaagctc tcgtgaagaa atttattaga 900 gttaataatt atgttgtgta taaccagcag gaagctggca agtatgagaa tcattctgag 960 aatgctttaa tgttgtatat ggcgtgtact cacgcctcta acccagtgta tgctaccttg 1020 aagatacgga tctacttcta tgattccgtg acaaattaat aaatattgaa ttttattgaa 1080 gatgattggt ctacaaatac aacatgttgt aatacattcc ataatacatg atcaactgct 1140 ctaactacat tattaatact gacaattcct aagttattta aatatttaag cacttgagtc 1200 gtaaagaccc ttaagaaacg accagtcgga ggctgtgagg tcatccagat tcggaaagct 1260 atgaaacatt tgtgtatccc caacgctttc ctcaggttgt gattgaactg gatcctgatc 1320 atgagtatat ccatattcgt cgtgaatgga cggttgacgt agctgatgat cttgaaatag 1380 aggggatttg gaacttccca gatatatgtg ccattccctg cttgagctgc agtgatgggt 1440 tcccctgtgc gtgaatccat ggttgtggca gttgattgac agatactaag aacaccctca 1500 ttcaagatct actctcctcc tcctgttgcg tctcttcgct tccctgtgct gtactctgat 1560 tggaagctga gtacagtggt ccttcgagag tgatgaaggt tgcatttttt aaggcccaat 1620 tctttaatga tgtgtttttt ccctcgttga ggaattcatt ataactgctg ttcggaccag 1680 gattgcacag gaagattgtc ggtatcccgc ctttaatttg aactggcttt ccgtattttg 1740 tgttggactg ccagtctctt tgggccccca tgaactcttt aaagtgtttg aggaaatgcg 1800 ggtcgacgtc atcaatgacg ttgtaccagg cgtcgttact gtatactttg ggactcaggt 1860 ccagatgtcc gcacaaatag ttatgtggtc ccaatgatct agcccacatc gtcttccccg 1920 ttcgactatc tccctcaatt actatactcc gaggtctaag gggccgcgca gcggcatcga 1980 caacgttatc gatggcccaa acttcaagtt cttctggaac ttgatcgaaa gaagaaggag 2040 aaaaaggaga aatataggga gccggtggct cctgaaagat tctatctaga tttgcattta 2100 aattatgaaa ttgtagtaca aaatctttag gagctagttc cttaatgact ctaagagcct 2160 ctgacttact gcctgcgtta agtgctgcgg cgtaagcgtc gttggctgtc tgctgtcctc 2220 ctcctgctga tcttccatcg atctgaaact ctccccactc gagagtgtcc ccgtccttgt 2280 cgatgtaggc cttgacatct gagcttgatt tagctccctg aatgttcgga tggaaatgtg 2340 ctgacctggt tggggatacc aggtcgaaga atctgttatt cgtgcagacg aatttgccct 2400 cgaactggat gagcacatgg agatgagggc tcccatcttc gtgtaactct ctgcagagtt 2460 tgatatattt tttattcgag ggtgtgttga tggcttgaat ttgggaaagt gcttcctctt 2520 tagtgagtga gcactgtgga taagtgatga aatagttttt ggcttgtact ttaaaacgtt 2580 tggggggagc cattgacttt ggtcaattag agacaactga tgggctttta ctctgggaat 2640 tggagactgg atacaattta tattgtctcc aaatggcata ttctgtaaat aactagaagt 2700 tcgtttgaaa ttcaaattcc cctttagggt ccaaaagcgg ccatccgtat aatatt 2756 //