ID FR751068; SV 1; circular; genomic DNA; STD; VRL; 2799 BP. XX AC FR751068; XX DT 21-JAN-2011 (Rel. 107, Created) DT 21-JAN-2011 (Rel. 107, Last updated, Version 1) XX DE Sweet potato leaf curl Uganda virus-[Uganda:Kampala:2008], complete genome XX KW complete genome. XX OS Sweet potato leaf curl Uganda virus-[Uganda:Kampala:2008] OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2799 RA Maruthi M.N.; RT ; RL Submitted (21-DEC-2010) to the INSDC. RL Maruthi M.N., Natural Resources Institute, University of Greenwich, Central RL Avenue, Chatham Maritime, Kent, ME4 4TB, UNITED KINGDOM. XX RN [2] RX AGRICOLA; IND44686213. RA Wasswa P., Otto B., Maruthi M., Mukasa S., Monger W., Gibson R.W.; RT "First identification of a sweet potato begomovirus (sweepovirus) in RT Uganda: characterization, detection and distribution"; RL Plant Pathol. 60(6):1030-1039(2011). XX DR MD5; 7816b6e0ff6d7272a40dde6eff4e44d9. XX FH Key Location/Qualifiers FH FT source 1..2799 FT /organism="Sweet potato leaf curl Uganda FT virus-[Uganda:Kampala:2008]" FT /host="Ipomoea setosa cv. New Kawago" FT /lab_host="Ipomoea setosa" FT /isolate="Uganda:Kampala:2008" FT /mol_type="genomic DNA" FT /country="Uganda:Kampala" FT /collected_by="Richard Gibson" FT /collection_date="Nov-2008" FT /identified_by="Richard Gibson" FT /tissue_type="leaves" FT /PCR_primers="fwd_name: SPLCUV-BamH1F, fwd_seq: FT ggatcctttgacgtttgtacaggc, rev_name: SPLCUV-BamH1R, rev_seq: FT ggatccttattaggcctcctatct" FT /db_xref="taxon:940846" FT CDS 92..445 FT /transl_table=1 FT /gene="AV2" FT /product="pre-coat protein" FT /db_xref="GOA:E8ZGG1" FT /db_xref="InterPro:IPR002511" FT /db_xref="UniProtKB/TrEMBL:E8ZGG1" FT /protein_id="CBY85115.1" FT /translation="MELWDPLQNPLPDTLYGFRCMLSVKYLQSILKKYEPGTLGFELCS FT DLIRILRVKQYGRANSRFAEISSLWGETGKTETELRDSYRALHWECCPNCCPKLCPGFS FT KRPDEEKEGGSHT" FT CDS complement(249..827) FT /transl_table=1 FT /product="hypothetical protein" FT /note="ORF" FT /db_xref="UniProtKB/TrEMBL:E8ZGG2" FT /protein_id="CBY85116.1" FT /translation="MVIRPTRYSNRKFLQDLHSISQIHSDLSSSRLIIIHSKCLYKRQR FT ILIRPPISDQPVSNDVGVVPLGDVVVHPNLTINTHRLNTHPLTQTMGKPSTSSKIRNTN FT KCPTMWDIHLKLIVLHLTWTNTTLRYAIPLLSLHLDVSRNRDIASGSNWDSIPSVGHDS FT CLEVQSPSYRSPPIGMKSPRNGNSPYHTA" FT CDS 258..1022 FT /transl_table=1 FT /gene="AV1" FT /gene_synonym="CP" FT /product="coat protein" FT /db_xref="GOA:E8ZGG3" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:E8ZGG3" FT /protein_id="CBY85117.1" FT /translation="MVGRIPVSRRFHPYGGRPVRRRLNFETAIVPYTGNAVPIAARSYV FT PVSRNVQMKRKKGDRIPKGCVGPCKVQDYEFKMDVPHSGTFVCVSDFTRGTGLTHRLGK FT RVCIKSMGIDGKVWMDDNVAKRDHTNIITYWLIRDRRPNKDPLTFVQAFTMYDNEPTTA FT KIRMDLRDRMQVLKKFSVTVSGGPYNHKEQALVRKFFKSLYNHVTYNHKEEAKYENHLE FT NALMLYSASSHASNPVYQTLRCRAYFYDSHNN" FT CDS complement(1038..1472) FT /transl_table=1 FT /gene="AC3" FT /gene_synonym="REn" FT /product="replication enhancer protein" FT /db_xref="GOA:E8ZGG4" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:E8ZGG4" FT /protein_id="CBY85118.1" FT /translation="MDLRTGESLSRAQTMRALEFDNNPMSVGRTAPFHLKFLYAHQSVQ FT GRTILKFQLQVNYRERKQLGFHKIFLQFRISTTQLTGATHSWTGILERLKWRICNEIAS FT LGFFSLINLVYVIRHLPESVRWIQEVDNIDCKDDVKALLY" FT CDS complement(1189..1635) FT /transl_table=1 FT /gene="AC2" FT /gene_synonym="TrAp" FT /product="transcriptional activator protein" FT /db_xref="GOA:E8ZGG5" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:E8ZGG5" FT /protein_id="CBY85119.1" FT /translation="MSNLPSGLKRTCPNQEPLHAEAKKAKRKVPEIRTRIVWKGCGCSA FT FITQTCKYQHGFTHRGITKSCSDYESTRIRQQPHVCGSDCTISPQIFIRPPERTGENHP FT EIPTSSELQGEETTWFPQDLPAIQDIDNPANWCYSQLDWYFGTP" FT CDS complement(1544..2638) FT /transl_table=1 FT /gene="AC1" FT /gene_synonym="Rep" FT /product="Replication-associated protein" FT /function="Virus replication" FT /db_xref="GOA:E8ZGG6" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:E8ZGG6" FT /protein_id="CBY85120.1" FT /translation="MPRAGRFNIKAKNYFLTYPQCSLTKEEALDQLLNLNTPTNKKFIK FT ICRELHENGEPHLHVLLQFEGNYQCTNQRFFDLVSPSRSTHFHPNIQRAKSSSDVKSYV FT DKDGDTLEWGEFQVDGRSARGGQQTAKDAAAEALNASSKEAALQIIREKLPEKFIFQYH FT NLVSNLDRIFSPPPSVYSSPFSLSSFNNVPDIISEWAAENVMDSAARPDRPISIVIEGP FT SRIGKTVWARSLGPHNYLCGHLDLSPKVYSNSAWYNVIDDVNPQYLKHFKEFMGAQKDW FT QSNCKYGKPVQIKGGIPTIFLCNPGEGSSFKIWLDKPEQEALKNWATANAIFCDVQSPF FT WTEEDVSQSGTTARRGEEGQEESS" FT CDS complement(2224..2487) FT /transl_table=1 FT /gene="AC4" FT /product="AC4 protein" FT /function="RNAi suppression" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:E8ZGG7" FT /protein_id="CBY85121.1" FT /translation="MKMGNLISTCCCSSKGTTNARIRDSSTLFPHQGRLTFIPISRELN FT PAPTSSPTSIRTETHWNGVSSRSTADLLEEASRLLKTQQQRP" XX SQ Sequence 2799 BP; 727 A; 561 C; 648 G; 863 T; 0 other; accggtgccc gccgcgccct ttaattgtgg gccccacacg ctttacttta atcattaaaa 60 ggcgtgcctg ttgcagtctt ggtcgccaag aatggagctg tgggacccac ttcagaaccc 120 tctcccagat actttatacg gttttcgttg tatgctttct gtaaaatatc tgcaaagtat 180 tttgaagaaa tacgaaccag gaaccctagg gttcgagttg tgttccgatc tcatccgcat 240 actgcgggtc aagcagtatg gtagggcgaa ttcccgtttc gcggagattt catccctatg 300 gggggagacc ggtaagacgg agactgaact tcgagacagc tatcgtgccc tacactggga 360 atgctgtccc aattgctgcc cgaagctatg tcccggtttc tcgaaacgtc cagatgaaga 420 gaaagaaggg ggatcgcata cctaagggtt gtgttggtcc atgtaaggtg caggactatg 480 agtttaagat ggatgtccca catagtggga catttgtttg tgtttctgat tttactagag 540 gtactgggct tacccatcgt ttgggtaaga gggtgtgtat taagtctatg ggtattgatg 600 gtaaggtttg gatggacgac aacgtcgcca agagggacca caccaacatc attacttact 660 ggttgatccg agataggagg cctaataagg atcctttgac gtttgtacag gcatttacta 720 tgtatgataa tgagcctact actgctaaga tccgaatgga tctgagagat agaatgcagg 780 tcttgaagaa attttctgtt actgtatctg gtgggcctta taaccataag gaacaggcgt 840 tagttaggaa gttttttaag agtttgtata accatgtaac ttataatcat aaggaggaag 900 ctaagtatga gaatcattta gagaatgcat tgatgttgta ttctgctagc agtcatgcta 960 gtaatcctgt gtatcagacc ctgcgttgca gggcttattt ttatgattcg cacaacaatt 1020 aataaaattg ttctttatta atatagtaat gcttttacat catctttaca atctatattg 1080 tctacttctt gtatccatct aactgattca ggtagatgcc tgattacata aactaaatta 1140 ataagagaaa aaaaacctaa actagctatt tcattacaaa ttcgccattt aaggcgttcc 1200 aaaataccag tccagctgtg agtagcacca gttagctggg ttgtcgatat cctgaattgc 1260 aggaagatct tgtggaaacc aagttgtttc ctctccctgt agttcacttg aagttggaat 1320 ttcaggatgg ttctcccctg tacgctctgg tgggcgtata aaaatttgag gtgaaatggt 1380 gcagtccgac ccacagacat ggggttgttg tcgaattcta gtgctctcat agtctgagca 1440 cgacttagtg attcccctgt gcgtaaatcc atgctggtac ttgcaagttt gggttatgaa 1500 tgctgaacag ccgcacccct tccacactat tcgcgtcctt atttcaggaa ctttcctctt 1560 ggccttcttc gcctctgcgt gcagtggttc ctgattggga cacgtcctct tcagtccaga 1620 agggagattg gacatcgcag aatatggcgt ttgctgttgc ccaatttttg agtgcctctt 1680 gttctggttt gtctagccag attttaaatg aggaaccctc tcctggattg cagaggaaga 1740 tagtgggaat tccaccttta atttgaactg gcttaccgta tttacagttg ctttgccagt 1800 ccttctgggc ccccatgaat tctttaaagt gctttaggta ttgggggttg acgtcatcaa 1860 tgacgttata ccaagcactg ttgctgtaca cttttgggct taagtctaaa tggccacaca 1920 gataattatg tggtcctaaa gatctagccc atactgtttt acctattcta cttgggcctt 1980 ctataacaat actaatgggc ctatctggcc gcgcagcgga atccatgaca ttttcagcag 2040 cccattcgct gataatgtca ggaacattat tgaaagaaga aagtgaaaaa ggagaagaat 2100 atacagaagg aggaggagaa aaaatcctat ctaaattact aactaaatta tgatattgga 2160 aaataaattt ctcagggagt ttctccctga ttatttgtaa ggcagcttct ttgctgcttg 2220 catttagggc ctctgctgct gcgtctttag cagtctgctg gcctcctcta gcagatctgc 2280 cgtcgacctg gaactcaccc cattccaatg tgtctccgtc cttatcgacg taggacttga 2340 cgtcggagct ggatttagct ctctggatat tgggatgaaa gtgagtcgac cttgatgggg 2400 aaacaaggtc gaagaatctc tgattcgtgc attggtagtt cccttcgaac tgcaacaaca 2460 cgtggagatg aggttcccca ttttcatgca gctctctgca tattttgatg aattttttgt 2520 ttgttggtgt gttgagatta agaagttggt cgagagcttc ttctttggta agagaacatt 2580 gaggatatgt aaggaaatag tttttggctt ttatattaaa acgccctgct ctcggcattt 2640 tgaactacca aatggtggac acacaaactc catatgaatt ggtggaacgg tggacaattt 2700 atatgtgtcc accaaatggc attttggtaa ttataacaac tttaatttga attctgaaat 2760 cctattggtc cgccataaag cgggcaccgt attaatatt 2799 //