Dbfetch
ID FR750322; SV 1; circular; genomic DNA; STD; VRL; 2760 BP. XX AC FR750322; XX DT 23-DEC-2010 (Rel. 107, Created) DT 23-DEC-2010 (Rel. 107, Last updated, Version 1) XX DE Cotton leaf curl Burewala virus complete genome, clone MV16 XX KW complete genome. XX OS Cotton leaf curl Burewala virus OC Viruses; Geminiviridae; Begomovirus; unclassified Begomovirus. XX RN [1] RP 1-2760 RA Ilyas M.; RT ; RL Submitted (15-DEC-2010) to the INSDC. RL Ilyas M., School of Biological Sciences, University of the Punjab (New RL Campus), 54590, PAKISTAN. XX RN [2] RA Muhammad I., Muhammad S.H., Briddon R.W.; RT "Diversity of cotton-infecting begomoviruses in Pakistan"; RL Unpublished. XX DR MD5; a94d761d4325a2083adfc776f0ddb3d5. XX FH Key Location/Qualifiers FH FT source 1..2760 FT /organism="Cotton leaf curl Burewala virus" FT /segment="A" FT /mol_type="genomic DNA" FT /country="Pakistan:Rahimyar Khan" FT /collected_by="Muhammad Ilyas" FT /clone="MV16" FT /tissue_type="leaf" FT /db_xref="taxon:620894" FT CDS 132..488 FT /gene="av2" FT /product="pre coat protein" FT /db_xref="GOA:B8Q6T2" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:B8Q6T2" FT /protein_id="CBY84002.1" FT /translation="MWDPLLNEFPDTVHGFRCMLAVKYLQLVEKTYSPDTLGYDLIRDL FT ILVIRARNYVEATSRYNHFHARFEGTPSSQLRQPICEPCCCPHCPRHQSKSMGEQAHEQ FT KAQDVQDVQKSRCS" FT CDS 292..1062 FT /gene="av1" FT /product="coat protein" FT /db_xref="GOA:D3HIR0" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:D3HIR0" FT /protein_id="CBY84003.1" FT /translation="MSKRPADIIISTPASKVRRRLNFDSPYVSRAAAPIVRVTKAKAWA FT NRPMNRKPRMYRMYRSPDVPRGCEGPCKVQSFESRHDIQHIGKVMCVSDVTRGTGLTHR FT VGKRFCVKSVYVLGKIWMDENIKTKNHTNSVMFFLVRDRRPVDKPQDFGEVFNMFDNEP FT STATVKNVHRDRYQVLRKWYATVTGGQYASKEQALVKKFIRVNNYVVYNQQEAGKYENH FT SENALMLYMACTHASNPVYATLKIRIYFYDSVTN" FT CDS complement(1059..1463) FT /gene="ac3" FT /product="replication enhancer protein" FT /db_xref="GOA:E7BBL6" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:E7BBL6" FT /protein_id="CBY84004.1" FT /translation="MDSRTGEPITAAQAGNGAYIWQVPNPLYFKIISHVNRPFTTNMDI FT LTIRIQFNHNLRKALGIHKYFIAFRIWMTSQPPTGRFLRVFRTQVLKYLNNLGIVSINN FT VVRAVDHVLWNVLQHVVFVDQSSSIKFNIY" FT CDS complement(2213..2683) FT /gene="ac4" FT /product="AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:E7BBL7" FT /protein_id="CBY84005.1" FT /translation="MPFGDTINCIQSPIPRVKAHQLSLIDQSQWLPPNVLKYKPEIISL FT LIHSAHSLKRKHFPKFKPSTHPRIKNTLNSAESYTKMGTIISMCSSSSRANSSARITDS FT STWYPQPGQHISIRTFRELNQAQMSRPTSTRTGTLSSGGEFQIDGRSARGGQ" XX SQ Sequence 2760 BP; 718 A; 543 C; 650 G; 849 T; 0 other; accggatggc cgcgcgattt ttttgtgggc cctaccatta tctcttgtcg gccaatcata 60 tgacgcgctc aaagcttaaa taattctccc gcctcttata agtacttcgt tgctaagtat 120 gcgtttgaaa aatgtgggat ccactgttaa atgagttccc cgataccgtt cacggtttta 180 ggtgtatgtt agcagttaaa tatttgcagt tagtagagaa aacttactct cctgatacat 240 tgggttacga tttgataagg gatttaatcc tggtaataag ggctaggaat tatgtcgaag 300 cgaccagcag atataatcat ttccacgccc gcttcgaagg tacgccgtcg tctcaacttc 360 gacagcccat atgtgagccg tgctgctgcc cccattgtcc gcgtcaccaa agcaaaagca 420 tgggcgaaca ggcccatgaa cagaaagccc aggatgtaca ggatgtacag aagtccagat 480 gttcctagag gatgtgaagg tccatgtaag gttcagtcgt ttgagtccag acatgatatt 540 cagcatatag gtaaagtaat gtgtgttagt gatgttactc gtggtactgg gctgacccat 600 agagttggta agagattttg tgttaagtct gtttatgtgt tgggtaagat ctggatggat 660 gagaacatta agacgaagaa tcacacgaat agtgtgatgt ttttcttggt tagagatcgt 720 agacctgttg ataaacctca agattttgga gaggtattta atatgtttga taatgagccc 780 agtacggcga ctgtgaagaa tgttcatcgt gataggtatc aagttctgcg taaatggtat 840 gcaactgtca ccggtggaca atacgcttca aaggaacaag ctctcgtgaa gaaatttatt 900 agagttaata attatgttgt gtataaccag caggaagctg gcaagtatga gaatcattct 960 gagaatgctt taatgttgta tatggcgtgt actcacgcct ctaacccagt gtatgctacc 1020 ttgaagatac ggatctactt ctatgattcc gtgacaaatt aataaatatt gaattttatt 1080 gaagatgatt ggtctacaaa tacaacatgt tgtaatacat tccataatac atgatcaact 1140 gctctaacta cattattaat actgacaatt cctaagttat ttaaatattt aagcacttga 1200 gtcctaaaga cccttaagaa acgaccagtc ggaggctgtg aggtcatcca gattcggaaa 1260 gctatgaaat atttgtgtat ccccaacgct ttcctcaggt tgtgattgaa ctggatcctg 1320 atcgtgagta tgtccatatt cgtcgtgaat ggacggttga cgtggctgat gatcttgaaa 1380 taaaggggat ttggaacctg ccagatatat gcgccattcc ctgcttgagc tgcagtgatg 1440 ggttcccctg tgcgtgaatc catggttgtg gcagttgatt gacagataat aagatcactc 1500 gcattcaaga tctactctcc tcctcctgct gcgtctcttc gcttccctgt gctgtacttt 1560 gattggaagc tgagtacagt ggtccttcga gagtgatgaa gattgcattt tttaaggccc 1620 aattctttaa tgctgtgttt ttttcctcgt tgaggaattc cgtataactg ctgttcggac 1680 caggattgca aaggaagatt gtcggtatcc cgcctttaat ttgaactggc tttccgtatt 1740 ttgtgttgga ctgccagtct ctttgggccc ccatgaactc tttaaagtgt ttgaggaaat 1800 gcgggtcgac gtcatcaatg acgttgtacc aggcgtcgtt actgtatact ttgggactca 1860 ggtccagatg tccgcacaaa tagttatgtg gtcccaatga tctagcccac atcgtcttcc 1920 ccgttcgact atctccctca attactatac tccgaggtct aaggggccgc gcagcggcat 1980 cgacaacgtt atcgatggcc caaacttcaa gttcttctgg aacttgatcg aaagaagaag 2040 gagaaaaagg agaaatatag ggagccggtg gctcctgaaa gattctgtct agatttgcat 2100 ttaaattatg aaattgtagt acaaaatctt taggagctag ttccttaatg actctaagag 2160 cctctgactt agtgcctgcg ttaagtgctg cggcgtaagc gtcgttggct gtctactgtc 2220 ctcctcttgc tgatcttcca tcgatctgaa actctccccc actcgagagt gtccccgtcc 2280 ttgtcgatgt aggccttgac atctgagctt gatttagctc cctgaatgtt cggatggaaa 2340 tgtgctgacc tggttgggga taccaggtcg aagaatctgt tattcgtgca gacgaatttg 2400 ccctcgaact ggatgagcac atggagatga tggttcccat cttcgtgtaa ctctctgcag 2460 agtttaatgt attttttatt cgagggtgtg ttgatggctt gaatttggga aagtgcttcc 2520 tctttagtga gtgagcactg tggataagta atgaaataat ttctggcttg tactttaaaa 2580 cgtttggggg gagccattga ctttggtcaa ttagagacaa ctgatgggct tttactctgg 2640 gaattggaga ctggatacaa tttatagtgt ctccaaatgg catattctgt aaataactag 2700 aagttcgttt gaaattcaaa ttctcctttg ggctccaaaa gcggccatcc gtataatatt 2760 //