ID   FR750321; SV 1; circular; genomic DNA; STD; VRL; 2759 BP.
XX
AC   FR750321;
XX
DT   23-DEC-2010 (Rel. 107, Created)
DT   23-DEC-2010 (Rel. 107, Last updated, Version 1)
XX
DE   Cotton leaf curl Burewala virus complete genome, clone MV15
XX
KW   complete genome.
XX
OS   Cotton leaf curl Burewala virus
OC   Viruses; Geminiviridae; Begomovirus; unclassified Begomovirus.
XX
RN   [1]
RP   1-2759
RA   Ilyas M.;
RT   ;
RL   Submitted (15-DEC-2010) to the INSDC.
RL   Ilyas M., School of Biological Sciences, University of the Punjab (New
RL   Campus), 54590, PAKISTAN.
XX
RN   [2]
RA   Muhammad I., Muhammad S.H., Briddon R.W.;
RT   "Diversity of cotton-infecting begomoviruses in Pakistan";
RL   Unpublished.
XX
DR   MD5; 36e2d36f00b06ec52bb7e612a71c08b0.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2759
FT                   /organism="Cotton leaf curl Burewala virus"
FT                   /segment="A"
FT                   /mol_type="genomic DNA"
FT                   /country="Pakistan:Rahimyar Khan"
FT                   /collected_by="Muhammad Ilyas"
FT                   /clone="MV15"
FT                   /tissue_type="leaf"
FT                   /db_xref="taxon:620894"
FT   CDS             132..488
FT                   /gene="av2"
FT                   /product="pre coat protein"
FT                   /db_xref="GOA:B8Q6T2"
FT                   /db_xref="InterPro:IPR002511"
FT                   /db_xref="InterPro:IPR005159"
FT                   /db_xref="UniProtKB/TrEMBL:B8Q6T2"
FT                   /protein_id="CBY83997.1"
FT                   /translation="MWDPLLNEFPDTVHGFRCMLAVKYLQLVEKTYSPDTLGYDLIRDL
FT                   ILVIRARNYVEATSRYNHFHARFEGTPSSQLRQPICEPCCCPHCPRHQSKSMGEQAHEQ
FT                   KAQDVQDVQKSRCS"
FT   CDS             292..1062
FT                   /gene="av1"
FT                   /product="coat protein"
FT                   /db_xref="GOA:D3HIR0"
FT                   /db_xref="InterPro:IPR000263"
FT                   /db_xref="InterPro:IPR000650"
FT                   /db_xref="UniProtKB/TrEMBL:D3HIR0"
FT                   /protein_id="CBY83998.1"
FT                   /translation="MSKRPADIIISTPASKVRRRLNFDSPYVSRAAAPIVRVTKAKAWA
FT                   NRPMNRKPRMYRMYRSPDVPRGCEGPCKVQSFESRHDIQHIGKVMCVSDVTRGTGLTHR
FT                   VGKRFCVKSVYVLGKIWMDENIKTKNHTNSVMFFLVRDRRPVDKPQDFGEVFNMFDNEP
FT                   STATVKNVHRDRYQVLRKWYATVTGGQYASKEQALVKKFIRVNNYVVYNQQEAGKYENH
FT                   SENALMLYMACTHASNPVYATLKIRIYFYDSVTN"
FT   CDS             complement(1059..1463)
FT                   /gene="ac3"
FT                   /product="replication enhancer protein"
FT                   /db_xref="GOA:B8Q6T4"
FT                   /db_xref="InterPro:IPR000657"
FT                   /db_xref="UniProtKB/TrEMBL:B8Q6T4"
FT                   /protein_id="CBY83999.1"
FT                   /translation="MDSRTGEPITAAQAGNGAYIWQVPNPLYFKIISHVNRPFTTNMDI
FT                   LTIRIQFNHNLRKALGIHKCFIAFRIWMTSQPPTGRFLRVFRTQVLKYLNNLGIVSINN
FT                   VVRAVDHVLWNVLQHVVFVDQSSSIKFNIY"
FT   CDS             complement(1505..2596)
FT                   /gene="ac1"
FT                   /product="replication associated protein"
FT                   /db_xref="GOA:E7BBL2"
FT                   /db_xref="InterPro:IPR001191"
FT                   /db_xref="InterPro:IPR001301"
FT                   /db_xref="InterPro:IPR022690"
FT                   /db_xref="InterPro:IPR022692"
FT                   /db_xref="UniProtKB/TrEMBL:E7BBL2"
FT                   /protein_id="CBY84000.1"
FT                   /translation="MATPKRFKVQAKNYFITYPQCSLTKEEALSQIQAINTPSNKKYIK
FT                   LCRELHEDGSHHLHVLIQFEGKFVCTNNRFFDLVSPTRSAHFHPNIQGAKSSSDVKAYI
FT                   DKDGDTLEWGEFQIDGRSARGGQQTANDAYAAALNAGTKSEALRVIKELAPKDFVLQFH
FT                   NLNANLDRIFQEPPAPYISPFSPSSFDQVPEELEVWAIDNVVDAAARPLRPRSIVIEGD
FT                   SRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHFLKHFKEFMGAQRDW
FT                   QSNTKYGKPVQIKGGIPTIFLCNPGPNSSYTEFLNEEKNTALKNWALKNAIFITLEGPL
FT                   YSASNQSTAQGSEETQQEEESRS"
FT   CDS             complement(2137..2682)
FT                   /gene="ac4"
FT                   /product="AC4 protein"
FT                   /db_xref="InterPro:IPR002488"
FT                   /db_xref="UniProtKB/TrEMBL:E7BBL3"
FT                   /protein_id="CBY84001.1"
FT                   /translation="MPFGDTINCIQSPIPRVKALQLSLIDQSQWLPPNVLKYKPKIISS
FT                   LIHSAHSLKRKHFPKFKPSTHPRIKNTSNSAESYTKMGAIISMCSSSSRANSSARITDS
FT                   STWYPQPGQHISIRTFRELNQAQMSRPTSTRTGTLSSGESFRSMEDQQEEDSRQPTTLT
FT                   PQHLTQALSQRPLESLRN"
XX
SQ   Sequence 2759 BP; 715 A; 545 C; 653 G; 846 T; 0 other;
     accggatggc cgcgcgattt ttttgtgggc cctaccatta tctcttgtcg gccaatcata        60
     tgacgcgctc aaagcttaaa taattctccc gcctattata agtacttcgt tgctaagtat       120
     gcgtttgaaa aatgtgggat ccactgttaa atgagttccc cgataccgtt cacggtttta       180
     ggtgtatgtt agcagttaaa tatttgcagt tagtagagaa aacttactct cctgatacat       240
     tgggttacga tttgataagg gatttaatcc tggtaataag ggctaggaat tatgtcgaag       300
     cgaccagcag atataatcat ttccacgccc gcttcgaagg tacgccgtcg tctcaacttc       360
     gacagcccat atgtgagccg tgctgctgcc cccattgtcc gcgtcaccaa agcaaaagca       420
     tgggcgaaca ggcccatgaa cagaaagccc aggatgtaca ggatgtacag aagtccagat       480
     gttcctagag gatgtgaagg tccatgtaag gttcagtcgt ttgagtccag acatgatatt       540
     cagcatatag gtaaagtaat gtgtgttagt gatgttactc gtggtactgg gctgacccat       600
     agagttggta agagattttg tgttaagtct gtttatgtgt tgggtaagat ctggatggat       660
     gagaacatta agacgaagaa tcacacgaat agtgtgatgt ttttcttggt tagagatcgt       720
     agacctgttg ataaacctca agattttgga gaggtattta atatgtttga taatgagccc       780
     agtacggcga ctgtgaagaa tgttcatcgt gataggtatc aagttctgcg caaatggtat       840
     gcaactgtca ccggtggaca atacgcttca aaggaacaag ctctcgtgaa gaaatttatt       900
     agagttaata attatgttgt gtataaccag caggaagctg gcaagtatga gaatcattct       960
     gagaatgctt taatgttgta tatggcgtgt actcacgcct ctaacccagt gtatgctacc      1020
     ttgaagatac ggatctactt ctatgattcc gtgacaaatt aataaatatt gaattttatt      1080
     gaagatgatt ggtctacaaa tacaacatgt tgtaatacat tccataatac atgatcaact      1140
     gctctaacta cattattaat actgacaatt cctaagttat ttaaatattt aagcacttga      1200
     gtcctaaaga cccttaagaa acgaccagtc ggaggctgtg aggtcatcca gattcggaaa      1260
     gctatgaaac atttgtgtat ccccaacgct ttcctcaggt tgtgattgaa ctggatcctg      1320
     atcgtgagta tgtccatatt cgtcgtgaat ggacggttga cgtggctgat gatcttgaaa      1380
     taaaggggat ttggaacctg ccagatatat gcgccattcc ctgcttgagc tgcagtgatg      1440
     ggttcccctg tgcgtgaatc catggttgtg gcagttgatt gacagataat aagatcaccc      1500
     gcattcaaga tctactctcc tcctcctgct gcgtctcttc gcttccctgt gctgtacttt      1560
     gattggaagc tgagtacagt ggtccttcga gagtgatgaa gattgcattt tttaaggccc      1620
     aattctttaa tgctgtgttt ttttcctcgt tgaggaattc cgtataactg ctgttcggac      1680
     caggattgca caggaagatt gtcggtatcc cgcctttaat ttgaactggc tttccgtatt      1740
     ttgtgttgga ctgccagtct ctttgggccc ccatgaactc tttaaagtgt ttgaggaaat      1800
     gcgggtcgac gtcatcaatg acgttgtacc aggcgtcgtt actgtatact ttgggactca      1860
     ggtccagatg tccgcacaaa tagttatgtg gtcccaatga tctagcccac atcgtcttcc      1920
     ccgttcgact atctccctca attactatac tccgaggtct aaggggccgc gcagcggcat      1980
     cgacaacgtt atcgatggcc caaacttcaa gttcttctgg aacttgatcg aaagaagaag      2040
     gagaaaaagg agaaatatag ggagccggtg gctcctgaaa gattctgtct agatttgcat      2100
     ttaaattatg aaattgtagt acaaaatctt taggagctag ttccttaatg actctaaggg      2160
     cctctgactt agtgcctgcg ttaagtgctg cggcgtaagc gtcgttggct gtctgctgtc      2220
     ctcctcttgc tgatcttcca tcgatctgaa actctcccca ctcgagagtg tccccgtcct      2280
     tgtcgatgta ggccttgaca tctgagcttg atttagctcc ctgaatgttc ggatggaaat      2340
     gtgctgacct ggttggggat accaggtcga agaatctgtt attcgtgcag acgaatttgc      2400
     cctcgaactg gatgagcaca tggagatgat ggctcccatc ttcgtgtaac tctctgcaga      2460
     gtttgatgta ttttttattc gagggtgtgt tgatggcttg aatttgggaa agtgcttcct      2520
     ctttagtgag tgagcactgt ggataagtga tgaaataatt tttggcttgt actttaaaac      2580
     gtttgggggt agccattgac tttggtcaat tagagacaac tgaagggctt ttactctggg      2640
     aattggagac tggatacaat ttatagtgtc tccaaatggc atattctgta aataactaga      2700
     agttcgtttg aaattcaaat tctcctttgg gctccaaaag cggccatccg tataatatt       2759
//