ID   FR718889; SV 1; linear; genomic RNA; STD; VRL; 1392 BP.
XX
AC   FR718889;
XX
DT   06-FEB-2011 (Rel. 107, Created)
DT   06-FEB-2011 (Rel. 107, Last updated, Version 1)
XX
DE   Cherry virus A MP gene for movement protein, genomic RNA, isolate JKSN28
XX
KW   .
XX
OS   Cherry virus A
OC   Viruses; Riboviria; Tymovirales; Betaflexiviridae; Trivirinae;
OC   Capillovirus.
XX
RN   [1]
RP   1-1392
RA   Noorani M.S.;
RT   ;
RL   Submitted (06-NOV-2010) to the INSDC.
RL   Noorani M.S., Plant Virology, Institute of Himalayan Bioresource Technology
RL   (CSIR), P.O. Box 6 Palampur, Himachal Pradesh 176061, INDIA.
XX
RN   [2]
RA   Noorani M.S., Awasthi P., Hallan V., Sharma M.P., Zaidi A.A.;
RT   "Molecular variability analysis of Movement protein gene of Indian isolates
RT   of Cherry virus A";
RL   Unpublished.
XX
DR   MD5; 16db86a51eb0c79ac7ae985a654e62c4.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1392
FT                   /organism="Cherry virus A"
FT                   /host="Prunus avium"
FT                   /isolate="JKSN28"
FT                   /mol_type="genomic RNA"
FT                   /country="India:Jammu & Kasmir, Srinagar"
FT                   /isolation_source="leaf tissue of host"
FT                   /collected_by="Md Salik Noorani"
FT                   /collection_date="Sep-2009"
FT                   /identified_by="Md Salik Noorani"
FT                   /PCR_primers="fwd_name: CVAMP F, fwd_seq:
FT                   atgtcgatcataccagtcaag, rev_name: CVAMP R, rev_seq:
FT                   ttaccttctgcaccaaccac"
FT                   /db_xref="taxon:42882"
FT   CDS             1..1392
FT                   /gene="MP"
FT                   /product="movement protein"
FT                   /db_xref="GOA:E8ZF48"
FT                   /db_xref="InterPro:IPR001815"
FT                   /db_xref="InterPro:IPR028919"
FT                   /db_xref="UniProtKB/TrEMBL:E8ZF48"
FT                   /protein_id="CBX55914.1"
FT                   /translation="MSIIPVKKFLQRVAGDESRIFIDAIRAKDIYSDANAFNSKVLTAV
FT                   KRFQSSIAIPASCTGESNVTQFNIFDEIELEAIKKASAEYSMLHLGAIIICVTCFFKLK
FT                   KPINGRIVYFDPRFLDKHDACQAGFSFQLQTGSAYYLYRPNYPMSTHDPNMHRAARIKF
FT                   EFDAINVVDNSHLFFIDFGVMYQLSNQSTAEKTTAADVGAQFQALFGSSGLPNPESFLE
FT                   DEDIVNPPTVALIDVSVDQSFRKGGFFKGPPRSTRARRYHARSKRQGFESTPRFAEKDS
FT                   EQQRRNLLRSNSCRAENFQFNPEQRFSVDQEFINKFDKCNSQRRDSNLTHGFEHCGAEL
FT                   QRNKKGPWKLHLGEYDRSKGSVTSNCETSSGGIRGSGSNPSNSIVREPESCKKHHQELL
FT                   PEDNVWESCSDGNKRTDRLPRGASSDSETSDRESGGSDCTSPSRHVIVNFCHKCESLGC
FT                   GWCRR"
XX
SQ   Sequence 1392 BP; 427 A; 283 C; 321 G; 361 T; 0 other;
     atgtcgatca taccagtcaa gaagtttctc caaagagttg caggagatga atcaagaata        60
     ttcattgacg caattcgtgc gaaggacatt tacagtgacg cgaatgcctt taactccaag       120
     gtgcttactg ctgttaaaag atttcagtct tcaattgcta tacctgcaag ctgcactggt       180
     gaaagtaatg ttacacagtt caacatcttt gatgaaattg agcttgaggc tatcaagaag       240
     gcctctgctg agtactcgat gcttcatctt ggagcaatca tcatatgtgt tacatgcttt       300
     ttcaagctca agaaaccaat caatggcagg attgtgtact ttgatccaag gttcctggac       360
     aaacatgatg catgccaagc gggctttagt ttccaattgc aaacgggttc tgcctattac       420
     ctctataggc caaattatcc gatgtccaca catgatccaa acatgcatag ggctgctaga       480
     atcaagtttg aattcgatgc aatcaatgtt gttgacaatt cccacttgtt cttcatcgat       540
     tttggagtca tgtaccaact tagcaaccaa agcactgcag aaaagacaac tgccgcagat       600
     gttggggcgc agtttcaagc actttttggg tcttctggac taccaaatcc tgaatccttt       660
     ctcgaggatg aagatattgt caaccctcca actgtggctc tcatcgatgt tagtgttgat       720
     cagagcttcc ggaagggtgg tttcttcaaa ggtccgccac gctcaacaag agccagaagg       780
     tatcatgcca gaagtaagag acagggtttt gaatcaaccc caagatttgc tgaaaaagat       840
     tctgaacagc agaggagaaa tttgcttagg tcaaattcat gtagggctga aaattttcag       900
     ttcaatccag aacaaaggtt ttcagttgat caagaattca tcaacaaatt tgataagtgc       960
     aattctcaga gaagggactc aaatctcaca catggctttg agcattgtgg agcagaatta      1020
     caacgaaata agaaggggcc ttggaaacta catctgggag aatatgatag atccaaggga      1080
     tctgttacat ctaactgcga aaccagcagt ggaggcatca gagggagtgg cagcaacccc      1140
     agcaatagta ttgtcagaga accagagagc tgtaaaaaac accatcagga attattacct      1200
     gaggataatg tttgggaatc ttgcagtgat gggaacaagc gaacagacag actacccagg      1260
     ggagcatcta gcgattccga gaccagtgat agagaatcag gaggctctga ctgcacatct      1320
     cccagcaggc atgtcattgt taacttttgc cacaaatgtg aaagcttggg gtgtggttgg      1380
     tgcagaaggt aa                                                          1392
//