ID   FR715680; SV 1; linear; genomic RNA; STD; VRL; 1086 BP.
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AC   FR715680;
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DT   23-OCT-2010 (Rel. 106, Created)
DT   23-OCT-2010 (Rel. 106, Last updated, Version 1)
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DE   Cassava brown streak virus partial gene for polyprotein, P1 protein region,
DE   isolate Uganda_Nam, genomic RNA
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KW   .
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OS   Cassava brown streak virus
OC   Viruses; Riboviria; Potyviridae; Ipomovirus.
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RN   [1]
RP   1-1086
RA   Winter S.;
RT   ;
RL   Submitted (18-OCT-2010) to the INSDC.
RL   Winter S., Plant Virus Department, DSMZ, Messeweg 11/12, 38104, GERMANY.
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RN   [2]
RA   Winter S., Koerbler M., Stein B.;
RT   "The diversity of Cassava brown streak virus and Ugandan cassava brown
RT   streak virus P1 genes and function";
RL   Unpublished.
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DR   MD5; 5292e00785a235c2f11fdf59b29bb515.
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FH   Key             Location/Qualifiers
FH
FT   source          1..1086
FT                   /organism="Cassava brown streak virus"
FT                   /isolate="Uganda_Nam"
FT                   /mol_type="genomic RNA"
FT                   /country="Uganda"
FT                   /isolation_source="Manihot esculenta"
FT                   /collected_by="S.Winter"
FT                   /collection_date="07-May-2010"
FT                   /identified_by="S.Winter"
FT                   /db_xref="taxon:137758"
FT   CDS             1..>1086
FT                   /product="polyprotein"
FT                   /db_xref="InterPro:IPR025910"
FT                   /db_xref="UniProtKB/TrEMBL:E3Q1F8"
FT                   /protein_id="CBX43975.1"
FT                   /translation="MTTIQLFKTVQFGSFEPITIECTTDEVPKIPAYIANAEGSRNALE
FT                   NAPELVSGNDNQKVKFKPIDLYSIIGNSIYCRSYVALKNFLNNTKWGGVFKNKKGQETS
FT                   AAGRLRRATSYGFMYDPVARAFECPVCRVKATELEAFRSDCPHCFEIKHVGDPRITKTE
FT                   TQFYPLNPNELDVTEELLDVSSSVWLDEDVEEAVVDRLVSTERKDIVKVRTALVKTKHE
FT                   PRIVANTSDLTKILTQICCESGIPIIDLDHRKRRAIPMVHLKHVYGIIEEDDLSEEDRG
FT                   FLEHVNASKVFWSCEKICYNMVRPGWSGAVIMRSSVQENEHDMFDFVDDMCVVQGKNKI
FT                   SGKIENALVRKSWDELQQIEMY"
FT   mat_peptide     1..>1086
FT                   /product="P1 protein"
FT                   /function="gene silencing suppression"
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SQ   Sequence 1086 BP; 337 A; 164 C; 277 G; 308 T; 0 other;
     atgacaacga ttcagctatt caagactgtt cagtttggtt catttgaacc gattacaatt        60
     gagtgcacta ctgatgaggt tccgaagata cccgcataca ttgcaaatgc tgagggtagt       120
     agaaatgctc tggaaaatgc tccagagtta gtttcaggaa acgataatca aaaggtcaaa       180
     ttcaagccga ttgatttgta ttctattatt ggaaattcta tttactgtcg cagttacgtg       240
     gcactaaaga actttctgaa taacacaaaa tggggtggtg ttttcaagaa taagaaggga       300
     caagagacta gtgctgctgg tcgtttgaga cgagcaacga gctatggatt catgtacgat       360
     cctgtagccc gagcatttga gtgcccagta tgtagggtga aagcaactga gcttgaagca       420
     tttaggagcg attgtcccca ttgctttgag attaagcatg ttggtgatcc tcgcatcact       480
     aaaacagaga ctcaatttta tccacttaat ccaaatgagt tagatgtaac tgaagagctt       540
     ttagatgtgt cttcgtcagt gtggttagat gaagatgttg aagaggcggt ggtagacagg       600
     cttgtgtcca cagagcgtaa ggacatcgtt aaagtcagaa ctgcgcttgt taaaaccaag       660
     cacgaaccga gaattgttgc aaatacttca gacttgacga aaatcttaac tcaaatttgc       720
     tgtgagtcag gaataccgat aattgattta gatcatcgaa agagaagggc aatcccaatg       780
     gtgcacttga aacatgtgta tgggattatt gaggaagatg atctcagtga agaagacaga       840
     ggattcttgg agcatgtgaa tgctagcaaa gtattttggt cgtgtgagaa aatttgctac       900
     aatatggtga gacctggttg gagtggtgct gttataatga ggagtagtgt ccaggaaaat       960
     gagcacgata tgttcgattt tgtcgatgat atgtgtgttg ttcaagggaa aaataagatt      1020
     agtggtaaga ttgagaatgc tctagttagg aagtcttggg atgagctaca acagattgaa      1080
     atgtat                                                                 1086
//