ID   FR694922; SV 1; linear; genomic RNA; STD; VRL; 1191 BP.
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AC   FR694922;
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DT   04-OCT-2010 (Rel. 106, Created)
DT   04-OCT-2010 (Rel. 106, Last updated, Version 1)
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DE   Apple stem pitting virus CP gene for coat protein, genomic RNA, isolate
DE   Rhoru
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KW   .
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OS   Apple stem pitting virus
OC   Viruses; Riboviria; Tymovirales; Betaflexiviridae; Quinvirinae; Foveavirus.
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RN   [1]
RP   1-1191
RA   Dhir S.;
RT   ;
RL   Submitted (01-OCT-2010) to the INSDC.
RL   Dhir S., Floriculture Division, Institute of Himalayan Bioresource
RL   Technology, IHBT, CSIR, Palampur, Himachal Pradesh. 176061, INDIA.
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RN   [2]
RA   Dhir S., Hallan V., Zaidi A.A.;
RT   "Diversity among coat protein gene of Apple stem pitting virus from India";
RL   Unpublished.
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DR   MD5; e20dee1f712331f4726276e6e9d58ec2.
DR   EuropePMC; PMC3550820; 23730008.
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FH   Key             Location/Qualifiers
FH
FT   source          1..1191
FT                   /organism="Apple stem pitting virus"
FT                   /host="Malus x domestica"
FT                   /isolate="Rohru"
FT                   /mol_type="genomic RNA"
FT                   /country="India:Rohru"
FT                   /isolation_source="host Leaf"
FT                   /collected_by="Sunny Dhir"
FT                   /collection_date="01-Jul-2010"
FT                   /identified_by="Sunny Dhir"
FT                   /db_xref="taxon:35350"
FT   CDS             1..1191
FT                   /gene="CP"
FT                   /product="coat protein"
FT                   /db_xref="GOA:E1Y7E9"
FT                   /db_xref="InterPro:IPR000052"
FT                   /db_xref="UniProtKB/TrEMBL:E1Y7E9"
FT                   /protein_id="CBX25660.1"
FT                   /translation="MASNGGQPPASAPMVSVEEPTASASAPISNVVSAAPVSAPIVSEP
FT                   VISQVQSVAPLVSGFDPNLHGQLTNEQIRQAQGEAARRGYEEGSRPNQRVLPLTSTYAN
FT                   YASMNSNPFETGTAFSEAPRVNMGLYPTSSSSGTSSEPNAQRIFPIQHGVSPSTHDANL
FT                   VAQQTNAVSNGGTPFTLGNRAPRNATSNTGGMRRRLDSTGLRNIRYEPQAGVVASNQKI
FT                   RAVGVALIGMGIPEHQLTEVGVYLARHCADVGASDKSTLLGTFPGSDITLEEVGTMIKQ
FT                   TEGCTLGQYCAFYAKHVWNLMLQTQSPPANWVGKEFKFETRYAAFVFFFGVESTASLEP
FT                   ADGLIRLPTQAERVANATSKEIQMYRIRSMEGTQAVNFGEVTGGKIGPKPVLSIRK"
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SQ   Sequence 1191 BP; 311 A; 292 C; 297 G; 291 T; 0 other;
     atggcctcca atggtggtca acctcccgcc tctgccccaa tggtttctgt ggaggaacct        60
     actgcttctg cttcagcccc aatttcaaat gttgtgagtg cagctccagt cagtgcgccc       120
     attgttagtg agcctgtcat ctctcaggtg caatctgtcg cacctcttgt gagtgggttt       180
     gatcccaatc tccatggaca gttaacaaat gaacaaattc gtcaagctca gggtgaggcg       240
     gctcggagag gctatgagga agggtctcgc ccaaatcagc gtgtactacc actcaccagt       300
     acctatgcca attacgccag tatgaattcc aatccctttg aaactggcac tgctttcagt       360
     gaggcaccaa gagtaaacat gggcctctat ccaacctctt caagctcagg aacttcaagt       420
     gagcccaatg cccagcggat attcccaatt cagcatggtg tgagtccatc aactcatgat       480
     gccaacctcg tggctcagca aacaaatgct gttagtaatg gtggcacacc tttcaccttg       540
     ggcaatcgag caccgaggaa tgctacttcc aacacagggg gtatgagaag gcgcctagat       600
     tccacaggtc tcaggaacat cagatatgaa ccccaggctg gggttgttgc aagcaaccaa       660
     aagataaggg ccgttggagt agcactcatt ggaatgggca ttcctgagca tcaactcact       720
     gaagtaggtg tttatttggc aagacattgt gctgatgttg gagcctctga caaatctaca       780
     ttactgggga cctttccggg atctgacata actttggagg aggtcggtac aatgatcaag       840
     cagacagagg ggtgcactct ggggcagtat tgtgccttct acgcgaagca tgtctggaac       900
     ctcatgctgc aaactcagag tcctcctgcc aattgggtcg gcaaagaatt caaatttgaa       960
     accaggtatg ctgcttttgt ctttttcttc ggagttgaaa gtactgcgtc acttgagcca      1020
     gctgatggtc taatcagact tccgacccag gcagaaagag tggcaaatgc aaccagtaaa      1080
     gagatacaaa tgtaccgtat ccgctctatg gagggcaccc aagctgttaa ctttggcgag      1140
     gttactgggg gaaagattgg acccaagcct gtactatcaa ttaggaagta a               1191
//