ID   FR694195; SV 1; linear; genomic RNA; STD; VRL; 2158 BP.
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AC   FR694195;
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DT   23-DEC-2010 (Rel. 107, Created)
DT   23-DEC-2010 (Rel. 107, Last updated, Version 1)
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DE   Avian orthoreovirus segment M2, strain AVS-B, genomic RNA
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KW   .
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OS   Avian orthoreovirus
OC   Viruses; Riboviria; Reoviridae; Spinareovirinae; Orthoreovirus.
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RN   [1]
RP   1-2158
RA   Banyai K.;
RT   ;
RL   Submitted (29-SEP-2010) to the INSDC.
RL   Banyai K., Hungarian Academy of Sciences, Veterinary Medical Research
RL   Institute, Hungaria krt. 21., Budapest, H-1143, HUNGARY.
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RN   [2]
RA   Banyai K., Dandar E., Dorsey K.M., Mato T., Palya V.;
RT   "The genomic constellation of a novel avian orthoreovirus strain associated
RT   with runting-stunting syndrome in broilers";
RL   Virus Genes 0:0(2010).
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DR   MD5; 2a588e888c6c31ba921bbb60fb076fce.
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FH   Key             Location/Qualifiers
FH
FT   source          1..2158
FT                   /organism="Avian orthoreovirus"
FT                   /segment="M2"
FT                   /strain="AVS-B"
FT                   /mol_type="genomic RNA"
FT                   /country="USA"
FT                   /db_xref="taxon:38170"
FT   CDS             30..2060
FT                   /gene="mu-B"
FT                   /product="mu-B protein"
FT                   /db_xref="GOA:E7AXT4"
FT                   /db_xref="InterPro:IPR009113"
FT                   /db_xref="InterPro:IPR015960"
FT                   /db_xref="InterPro:IPR015961"
FT                   /db_xref="InterPro:IPR015962"
FT                   /db_xref="InterPro:IPR036256"
FT                   /db_xref="UniProtKB/TrEMBL:E7AXT4"
FT                   /protein_id="CBX25027.1"
FT                   /translation="MGNATSVVQNFNIQGDGNHFAPSAETTSSAVPSLSLNPGLLNPGG
FT                   KAWTLIDASLNASDPSSLRLMTSADLSTLSQSAVGNSTGFLPTSGMYALTTKETLSVVT
FT                   DHAIAQFEKLQMACELDRDYLDARGVSPESVNIHNYIVYVDCFVGVSARQAASNFQQRV
FT                   PVITKSRMTQFMTSAQNILQVLGPWERDIRELLTIIPTSTTAGKLSCDMRSVVSFVDSQ
FT                   LSDTSLCRLYPECAAAAVARRNGGIRWKQADSDEAPSLATNDIAASTMGALANTTPLSE
FT                   KSNSGEESMRLVNDVGVDIMSSRGPISSSVWSRTVEPKSYNIRTLRVEEALWLRESQAT
FT                   AGFDVSYTLPDQTTQKHFWLQKGSTVINLEQTGSMMFEVNVSGKDYKKGSFDPDNHKLV
FT                   LLVMQSKIPFESWTGASQIDGIAQVAEVTVHAADSSTPSRKIIGETSLSYLFERETVTT
FT                   ANTEVNTYLLCTWQLDDAQSNGDNAWPDAWDAITTLTSLTSGTVTIKGTSVDSVTPVDL
FT                   VGAYTPEALSAALPNDAGLILADKATKLANAIKKEDDSVIDESSPFSTPIQGVLAVQQL
FT                   DTVGTRGVRTIQPPAFLKRVASRALHMFLGDPHSILKQTTPVLKDPEVWTGFIQGVRDG
FT                   IRTKSLSAGVRSVYNNVTATQSVQTWKQGFLTKIQTLFKPS"
XX
SQ   Sequence 2158 BP; 530 A; 520 C; 518 G; 590 T; 0 other;
     gctttttcag tgcctatctt tctcacaaca tgggtaacgc gacgtctgta gtacagaact        60
     ttaacatcca aggtgatggc aatcactttg caccttcagc cgaaaccaca tcatccgctg       120
     taccctccct ttcattaaat cctggtttgc tcaatcccgg cggcaaagct tggactttga       180
     ttgacgcgtc tctcaatgca tcggatccat cttccctgcg gttaatgact tcggctgatc       240
     tgtctacgct gtcccaatct gctgttggta attctactgg attcctacca acttcgggca       300
     tgtatgctct gaccactaag gagacattaa gtgttgtgac ggatcatgct atagcacagt       360
     ttgaaaaatt gcagatggcc tgtgagttag atcgtgatta tttggatgct cgcggcgtat       420
     cacctgaatc tgttaacatc cataactata tagtgtatgt cgactgtttc gtgggcgttt       480
     ctgctcgcca agccgcatca aacttccaac aacgtgtgcc agttataacc aaatccagga       540
     tgactcaatt catgacatcc gcacagaata ttctacaggt acttggtccc tgggagcgtg       600
     atattcgtga attgcttact atcataccca cttctactac cgctggcaag ttatcatgtg       660
     acatgaggtc agtagttagt ttcgtcgata gtcagctatc agatacgagt ttgtgccgcc       720
     tctacccaga atgtgctgca gcagccgtgg ctagaaggaa tggtggaata cgttggaagc       780
     aggctgatag tgatgaagcc ccttctcttg ctactaatga catagctgct tcaacgatgg       840
     gagcccttgc taatactact cctctctcgg agaagtctaa ttccggcgaa gagtccatgc       900
     gtctagtgaa tgatgtgggc gtagacatta tgagctcccg aggccccatt agttcctccg       960
     tgtggtcccg tactgttgaa cctaaatctt acaatattag gacacttcgt gtggaagaag      1020
     cgttatggct gcgtgagagt caggctactg ctggtttcga cgtctcatac actctgcctg      1080
     atcaaactac ccagaagcat ttttggctgc agaaaggctc tactgtgatc aatcttgagc      1140
     aaactggtag tatgatgttc gaagtaaacg tgtctggcaa ggattacaag aaaggctctt      1200
     tcgatcctga taatcataag ttggttcttc ttgtgatgca atccaagata ccctttgaat      1260
     cttggacagg ggcgtcccaa attgatggta ttgcacaagt agccgaggtg acagtgcacg      1320
     cagctgatag ttctacgcct agccgtaaga tcatagggga gacgtcacta tcctacttgt      1380
     ttgagagaga aacggttacc accgccaaca ctgaggttaa cacttacctc ctatgcacgt      1440
     ggcagcttga tgacgcacaa agtaatggcg acaatgcgtg gcccgacgca tgggatgcaa      1500
     tcactacctt gacgtcatta acttcgggaa ctgtgacgat taaagggaca tccgtagatt      1560
     ccgtcactcc ggttgattta gttggagctt atacacctga agccctttcc gcagcccttc      1620
     caaacgatgc cggccttata ctcgcggata aagctacgaa gctggctaat gccattaaga      1680
     aggaagatga ttctgttatt gatgaatcgt caccttttag tactccgatt caaggtgtgt      1740
     tagcggttca gcaactggac accgttggta cacgaggtgt acgaacgatt cagcccccag      1800
     cgtttctaaa acgtgttgcc tctcgagctt tgcatatgtt tctgggtgat ccccattcta      1860
     tcctcaagca aactacgcct gtgctaaaag atcctgaagt ctggactgga ttcattcaag      1920
     gcgtgcgaga tggcatccgt actaaatcat tgtccgcggg agtgagatct gtttataata      1980
     acgtcaccgc aacacagtcc gttcaaacgt ggaagcaggg gtttctgact aaaatacaga      2040
     cgttgttcaa accatcgtga ggtgctaagg cctctctccg cggcgggtcg gtgggcacgt      2100
     cgtggtgatg ctgaatgcac gggggggtga cgccctctgg attggcacgt tactcatc        2158
//