ID FR694194; SV 1; linear; genomic RNA; STD; VRL; 2283 BP. XX AC FR694194; XX DT 23-DEC-2010 (Rel. 107, Created) DT 23-DEC-2010 (Rel. 107, Last updated, Version 1) XX DE Avian orthoreovirus segment M1, strain AVS-B, genomic RNA XX KW . XX OS Avian orthoreovirus OC Viruses; Riboviria; Reoviridae; Spinareovirinae; Orthoreovirus. XX RN [1] RP 1-2283 RA Banyai K.; RT ; RL Submitted (29-SEP-2010) to the INSDC. RL Banyai K., Hungarian Academy of Sciences, Veterinary Medical Research RL Institute, Hungaria krt. 21., Budapest, H-1143, HUNGARY. XX RN [2] RA Banyai K., Dandar E., Dorsey K.M., Mato T., Palya V.; RT "The genomic constellation of a novel avian orthoreovirus strain associated RT with runting-stunting syndrome in broilers"; RL Virus Genes 0:0(2010). XX DR MD5; 382bc5f9df001bfd6585cbf651633528. XX FH Key Location/Qualifiers FH FT source 1..2283 FT /organism="Avian orthoreovirus" FT /segment="M1" FT /strain="AVS-B" FT /mol_type="genomic RNA" FT /country="USA" FT /db_xref="taxon:38170" FT CDS 13..2211 FT /gene="mu-A" FT /product="mu-A protein" FT /db_xref="GOA:E7AXT3" FT /db_xref="InterPro:IPR012494" FT /db_xref="UniProtKB/TrEMBL:E7AXT3" FT /protein_id="CBX25026.1" FT /translation="MAYLATPVLGVGSRITALDRTIDAITLKPRIDLQDVYTLDPTLTL FT RQIELISSGTSMDDIARGLLHRDWRRQSTIVLLPSRRSLLEYLLSNPSSCPDGLDRSRL FT KGFQKRPNDFRVQDFFSPLITDTTSIATYSRWLNAHPTVYSTTHKVAGARVRLFGPAKL FT YILSPDVLRELSILKSTDRILVVPTARVYVGCFPSASTSNCVLTARERWNAPDVHPVVK FT AIQLAYDHQYRVTARYLSDPLVSALLLGTRSVKTLKVQPIEARAARSVGIRVQAMTPPR FT GINTSIIQVVDLRLQCRHSLIPTERPFPLTFVGLPSCLLQHLDLTLSDDWVPIRDHTGM FT FEMWFMILTLTCDKILDGRGSAVFLIPSSTNALSINYVQLTSTASPRPQSLAANASGRI FT DSIGLCMPKGSFKSTMIKFLTGLEICGTRVMYPDVVMDSDDVGDALDPTFETALYDALI FT ALDPPFDVDKLASPTDLVNQEYVASHMYPTFLRLVNELLTPKASELYSERSVEFRSLTY FT AHADSEFLNACWTARLMRCFINYHEEQNILLRPGRVGGVLFQVALSRCYKMFATSTPAS FT PLSLFLKSLFVPWIESAPLLASLTPNESSRVLAWYIPSSYWSDNGWCTCDTHRHVTFSF FT IRGLPTDLSVLDLFDWSRFRATINVDTSLVELGADIRAVKVSVHWTSQKPTVDVFDNRA FT LFTPFQHYHLSLHCNCAPGRPFFAKNMKLYLSTVGGEH" XX SQ Sequence 2283 BP; 472 A; 603 C; 505 G; 703 T; 0 other; gcttttctcg acatggccta tctagccaca cctgtgctag gagtcggttc tcgcattacc 60 gccttagatc gtactattga tgctatcacg ttgaaacctc gaatcgacct ccaagatgtg 120 tatacgcttg atcccacact gacgttgcgt cagatagagt taatctcttc gggaacttca 180 atggacgata tcgctcgtgg actattgcac cgggactggc gtcgtcaatc caccattgtc 240 ttgcttcctt cccgtcgctc tctccttgag tatttactgt ctaacccttc ctcttgtcca 300 gatggtttag atcgctctcg actcaaagga tttcaaaagc gaccaaatga ttttcgtgtt 360 caggatttct tttcgccatt gattacggac actacgtcaa tcgctaccta ctctcgatgg 420 cttaatgctc atcctaccgt gtactctact acccataaag ttgccggcgc ccgagtgcgt 480 ctctttggac ccgctaaatt gtacatcctg tcgcctgatg ttcttcgtga gttatccatt 540 ttgaaatcca ctgatcgcat actcgttgtg cccacagctc gtgtgtatgt tggttgtttt 600 cccagcgctt ctactagtaa ttgtgtactc actgcacgtg agcgttggaa tgctcctgac 660 gttcatccag ttgtcaaagc aattcagtta gcatacgatc atcaatatcg tgtcaccgct 720 cgctatctct ctgatcctct tgtctcagct ctccttcttg gaactcggtc ggtcaagacg 780 ttgaaagtac agccgataga agctcgagcc gcacgatcag ttggcatccg cgtacaagcg 840 atgacacctc cccgtggcat taacacctca attattcaag tcgttgatct taggctacag 900 tgtcgtcatt ccctcatccc cactgaaagg ccattcccgt taacgtttgt cggcctccca 960 tcgtgtttgc ttcaacattt ggatttaaca ttatctgatg actgggtgcc cattcgtgat 1020 catacaggta tgtttgagat gtggtttatg attcttactc tcacttgtga taaaattctt 1080 gacggacggg ggagcgccgt ttttctcatt cccagctcta ctaatgcact gtcaattaac 1140 tatgtacagc tcacgtcgac cgcgtctcca cgtccccaat cgttggcagc taacgcatct 1200 ggacggatag attccattgg actgtgtatg cccaaaggat ctttcaagtc gaccatgatt 1260 aaatttctca ctggactaga aatttgcggc acgcgagtaa tgtacccgga cgtcgtgatg 1320 gacagtgatg acgtgggtga cgctttggat cctacttttg aaactgccct atatgacgca 1380 ttgatagctc ttgacccgcc ctttgacgtt gacaagttag ctagtcctac tgatttagtc 1440 aatcaggagt atgttgcatc ccacatgtac ccgacgttct tgaggcttgt caatgagttg 1500 ctgactccca aagcttcaga gttatactcg gagcgtagtg tcgaattccg atctctcact 1560 tacgcgcatg ccgattctga atttcttaac gcttgctgga ccgctcgttt gatgcgctgc 1620 tttatcaatt atcatgagga gcagaatatc ctgcttcgtc ctgggcgcgt tggtggtgta 1680 ctattccagg ttgcgctgag tcgctgttat aagatgttcg ctacttctac tcctgcttcc 1740 cctctgtcat tgttcctcaa gtcgttgttt gtcccctgga ttgaatctgc cccactgtta 1800 gctagtctca cgccaaacga atcttctcgt gtgctagcat ggtatatccc ttcctcgtac 1860 tggagcgaca atggctggtg cacttgtgac actcatcgtc acgtcacctt ttctttcatt 1920 cgcggtcttc ctactgacct gtcggtgtta gatctatttg attggtctcg ctttcgtgcg 1980 actataaacg tagacacatc tctagtggag ttgggcgctg atatccgtgc agttaaagta 2040 tccgttcatt ggacatctca gaagcccact gtggacgttt ttgacaatcg tgcgcttttc 2100 actcccttcc agcactacca tttgagtctc cattgtaact gcgcgcccgg tcgcccgttc 2160 tttgcgaaga acatgaaact atatttgtcg acggttggag gcgagcactg acgggccatg 2220 gggcggtgac acccagggag ggtatgctgg taaccctggg ttagtcgtct tgagatactc 2280 atc 2283 //