ID   FR687358; SV 1; linear; genomic RNA; STD; VRL; 2183 BP.
XX
AC   FR687358;
XX
DT   03-MAR-2011 (Rel. 108, Created)
DT   03-MAR-2011 (Rel. 108, Last updated, Version 1)
XX
DE   Raspberry bushy dwarf virus MP gene for movement protein and CP gene for
DE   coat protein, isolate SE3, genomic RNA
XX
KW   .
XX
OS   Raspberry bushy dwarf virus
OC   Viruses; Riboviria; Idaeovirus.
XX
RN   [1]
RP   1-2183
RA   Valasevich N.;
RT   ;
RL   Submitted (03-SEP-2010) to the INSDC.
RL   Valasevich N., Department of Plant Biology and Forest Genetics, Swedish
RL   University of Agricultural Sciences, Box 7080, SE-750 07 Uppsala, SE-750
RL   07, SWEDEN.
XX
RN   [2]
RX   DOI; 10.1007/s00705-010-0912-9.
RX   PUBMED; 21253783.
RA   Valasevich N., Kukharchyk N., Kvarnheden A.;
RT   "Molecular characterisation of Raspberry bushy dwarf virus isolates from
RT   Sweden and Belarus";
RL   Arch. Virol. 156(3):369-374(2011).
XX
DR   MD5; 5a77f2da550b452325c62b1a2d18bc5b.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2183
FT                   /organism="Raspberry bushy dwarf virus"
FT                   /segment="RNA-2"
FT                   /host="Rubus idaeus"
FT                   /isolate="SE3"
FT                   /mol_type="genomic RNA"
FT                   /country="Sweden:Uppsala"
FT                   /collection_date="10-Sep-2009"
FT                   /db_xref="taxon:12451"
FT   CDS             106..1182
FT                   /gene="MP"
FT                   /product="movement protein"
FT                   /db_xref="UniProtKB/TrEMBL:F0V408"
FT                   /protein_id="CBW59119.1"
FT                   /translation="MFSRSSSTRSSLVGSRGGSIFGGGSVKKSSTVRGFSAGLERSRGL
FT                   PSASAGENQISLPGLRIPVKTSSQPGNYYLKERGIDLPIVQQQKFLAADGKEMGECYLL
FT                   DTSRTDLLDAAKAALNESNLLEFNKFKEFKKYKGKNNEFPLVEASVFDKLIRKDESPIH
FT                   LNRLLIAVVPAVGKGTPGTARIKIRDARLDDGYGELFSSENRVDSGYIYCINVGYSVPK
FT                   SEIDYKINIDFAGVPIKDGKSPIWVKAAFSLAGGSPVFFDGTMSLGAEILPDSHKELLG
FT                   TSALLLNEANSNRKSFSGDDGELRRDYPYKRFEEISPLDSISQVDTASQDSVNEVNTEN
FT                   VQNGTGEVYLAPPSHSVY"
FT   CDS             1300..2124
FT                   /gene="CP"
FT                   /product="coat protein"
FT                   /db_xref="GOA:F0V409"
FT                   /db_xref="InterPro:IPR009516"
FT                   /db_xref="UniProtKB/TrEMBL:F0V409"
FT                   /protein_id="CBW59120.1"
FT                   /translation="MSKKAVPPIVKAQYELYNRKLNRAIKVSGSQKKLDASFVGFSESS
FT                   NPETGKPHADMSMSAKVKRVNTWLKNFDREYWDNQFASKPIPRPAKQVLKGSSSKSQQR
FT                   DEGEVVFTRKDSQKSVRTVSYWVCTPEKSMKPLKYKEDENVVEVTFNDLTAQKAGDKLV
FT                   SILLEINVVGGAVDDKGRVAVLEKDAAVTVDYLLGSPYEAINLVSGLNKINFRSMTDVV
FT                   DSIPSLLNERKVCVFQNDDSSSFYIRKWANFLQEVSAVLPVGTGKSSTIVLT"
XX
SQ   Sequence 2183 BP; 585 A; 430 C; 526 G; 642 T; 0 other;
     tggacatctc gagtttgctc tttggtggtc attgagtgtc gaatttagtg tctgattctc        60
     ttttctctat taaaagtaaa atatatcctt ggtgactgtg tcatcatgtt tagcagaagt       120
     tcctctactc gcagctccct tgtggggagc aggggtggct ccatttttgg agggggatct       180
     gttaagaagt ctagtactgt gagggggttc tctgccggtc ttgaaagatc gcgaggatta       240
     ccttccgcca gcgctggtga aaaccagatc tcgctgccgg ggcttaggat cccagttaag       300
     acttcttcac aaccgggaaa ttactacctt aaggagagag gtattgattt gccaattgtg       360
     caacagcaga agtttctggc cgctgacggc aaagaaatgg gggagtgtta ccttttggac       420
     acttcccgaa ctgatctgtt ggacgctgct aaagcagcgt taaacgagtc taatcttctt       480
     gaattcaaca aattcaagga atttaagaag tataagggaa agaacaatga attccctttg       540
     gttgaggcat cagtttttga taaactgatc aggaaggacg agtctcccat acaccttaac       600
     aggcttttaa tagctgttgt gcctgccgta ggaaaaggaa caccaggaac cgcacgaatt       660
     aaaattcgtg acgcgcgcct ggatgatggt tatggtgagc tttttagttc tgaaaatcgt       720
     gtggactctg gctacattta ttgtataaat gtaggttatt ctgttcctaa gtccgaaatc       780
     gattacaaaa tcaatattga ttttgccggg gtacccatca aagatggtaa gtccccgatt       840
     tgggttaaag ctgccttctc tttagctggt ggctcccctg tgttctttga tggaacaatg       900
     agcttgggtg ctgagatttt gcccgactct cataaagagt tattgggcac ctctgctttg       960
     ttgttgaatg aggcgaattc caataggaag tcgttctctg gtgatgacgg agagcttaga      1020
     agggattatc cttataagcg ttttgaggaa atttcacctt tggattctat aagtcaggtc      1080
     gatacggcca gtcaagactc cgttaatgag gtgaacaccg aaaatgttca aaacggtact      1140
     ggtgaggtgt atttggcacc tccttcacat tccgtttatt aataacttag ttgttaatgc      1200
     attgaatgca tatgacactt agtgtcagtt ctgtggttaa gattttccta accgtgttat      1260
     atttcattgt tgaattaata ctaagtattt aagttttcaa tgtcgaagaa agctgttcca      1320
     ccaatcgtta aggctcaata tgagctttat aatcgtaagt tgaacagagc tatcaaggtt      1380
     tccggcagtc agaagaagct agacgcttct tttgtcgggt tcagtgagag ctctaaccca      1440
     gaaactggga aaccccacgc ggacatgtct atgtctgcca aggttaagcg cgttaatacg      1500
     tggcttaaaa actttgatcg cgaatattgg gataaccaat tcgcatcaaa acctattcct      1560
     agacccgcaa aacaggtctt gaagggttca tcctccaaat ctcaacaacg agatgaagga      1620
     gaggtggtct ttacccgaaa agactcccag aaatccgtta ggactgtgtc ctattgggtt      1680
     tgtactcctg agaagtcaat gaaacctctc aaatacaagg aggacgaaaa cgtcgttgaa      1740
     gttaccttca atgacctcac ggctcaaaag gctggtgaca aattggtttc catactgttg      1800
     gaaatcaatg tggtgggcgg tgccgtcgac gacaaaggtc gagtggctgt cctggaaaag      1860
     gatgctgccg tgacggttga ttaccttctc ggaagcccgt atgaagccat aaatcttgtt      1920
     tcgggtttaa acaagataaa tttcagatcc atgacggatg tggtagattc cataccatcg      1980
     ctcttaaatg agcgtaaggt gtgtgtcttc cagaatgacg acagttcgtc gttttacatt      2040
     cggaaatggg ctaacttcct tcaggaagtt tcggcagttt taccggtagg aaccggtaaa      2100
     tcttccacaa tagttctaac ttagttcgga ctatttgcct gctagtgggc atatctcaca      2160
     atttgtgaga taaacggcat agc                                              2183
//