ID   FN995637; SV 1; linear; genomic RNA; STD; VRL; 846 BP.
XX
AC   FN995637;
XX
DT   02-JUL-2010 (Rel. 105, Created)
DT   02-JUL-2010 (Rel. 105, Last updated, Version 1)
XX
DE   Tomato necrotic ringspot virus N gene for nucleocapsid protein, genomic
DE   RNA, isolate CR, clone 2
XX
KW   .
XX
OS   Tomato necrotic ringspot virus
OC   Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Ellioviricetes;
OC   Bunyavirales; Tospoviridae; unclassified Tospoviridae.
XX
RN   [1]
RP   1-846
RA   Srivilai K.;
RT   ;
RL   Submitted (27-JUN-2010) to the INSDC.
RL   Srivilai K., Plant Pathology, Faculty of Agriculture, Kasetsart university,
RL   1 Malaiman Road, Kamphaeng saen, Nakhon Pathom,, 73140, THAILAND.
XX
RN   [2]
RA   Srivilai K., Chiemsombat P., Hongprayoon R.;
RT   "Characterization of Tomato necrotic ringspot virus";
RL   Unpublished.
XX
DR   MD5; a71d5fee451b943ec230d779fc93f39f.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..846
FT                   /organism="Tomato necrotic ringspot virus"
FT                   /isolate="CR"
FT                   /mol_type="genomic RNA"
FT                   /country="Thailand"
FT                   /isolation_source="leaf of Solanum lycopersicum"
FT                   /identified_by="Kanuengnij Srivilai"
FT                   /clone="2"
FT                   /PCR_primers="fwd_name: TNRV_N-F, fwd_seq:
FT                   atatatcaaacacacacagac, rev_name: 3'VGTospo, rev_seq:
FT                   gtaaacaccatgtctaacgt"
FT                   /db_xref="taxon:584711"
FT   CDS             1..846
FT                   /codon_start=1
FT                   /gene="N"
FT                   /product="nucleocapsid protein"
FT                   /db_xref="GOA:D8MJ22"
FT                   /db_xref="InterPro:IPR002517"
FT                   /db_xref="UniProtKB/TrEMBL:D8MJ22"
FT                   /protein_id="CBO84775.1"
FT                   /translation="MSNVRKTLSNEKIKELLAGGEADIEIELDEATPGFSFSKFYDENK
FT                   QDIFGKFTFNNGITILKSRKQIFAACKNNQFVFCGKQIAQNSDTADEKTWTFKRTEAVL
FT                   RVLMAKMVEECTTQKLQQDMYSKLMSLPMVIAYGLNVPPNFDSSATRLMLCVGGPLPLL
FT                   SSLPAMAPIAFPLAYFQNVKKQNLGIKNFSTYEQLCKVARVCDAAQIEFTGDLKKLFES
FT                   ATAILKTSSPGTASSISLKKYSEQIAHLEKAFGSKPVIDDFGSNSVSTSKPARRGSTGL
FT                   "
XX
SQ   Sequence 846 BP; 283 A; 161 C; 172 G; 230 T; 0 other;
     atgtctaacg ttaggaaaac cttatcaaac gagaaaatca aggaattgct agctggagga        60
     gaagcagaca ttgaaataga gcttgatgaa gctacaccag ggttcagctt ttctaaattc       120
     tatgatgaaa acaaacagga catcttcgga aaatttacat tcaacaatgg aataactata       180
     ctaaagagta gaaagcagat atttgcagcc tgcaagaaca atcaattcgt cttttgtgga       240
     aagcaaatag cacaaaattc tgacactgct gatgaaaaga catggacatt caagagaact       300
     gaagctgtcc ttagagttct catggcaaag atggttgaag aatgcacaac ccagaaactc       360
     cagcaagata tgtattcaaa gcttatgtca cttcctatgg tcattgctta cgggttgaat       420
     gtacctccta attttgattc tagtgcaacc agactgatgc tgtgtgttgg cggtcctttg       480
     cctttattgt ctagtctccc tgcaatggca cccatagctt tccctctggc atatttccag       540
     aacgtcaaaa aacagaatct cggaataaaa aacttttcta catatgaaca gctatgtaaa       600
     gttgctcgag tatgtgatgc tgctcaaatt gaatttactg gtgatttgaa gaaattattc       660
     gaatctgcaa cagccatttt gaagactagc tcacctggaa cagctagctc tatatccttg       720
     aagaaatact cagaacagat tgctcacctt gagaaagcat ttggatccaa gccagtcatt       780
     gatgattttg gtagcaatag tgtgagtact agcaagccag ctaggagagg aagtacagga       840
     ctataa                                                                  846
//