Dbfetch
ID FN794201; SV 1; circular; genomic DNA; STD; VRL; 2753 BP. XX AC FN794201; XX DT 11-OCT-2010 (Rel. 106, Created) DT 27-APR-2011 (Rel. 108, Last updated, Version 2) XX DE Ageratum enation virus complete genome, clone UwuA XX KW complete genome. XX OS Ageratum enation virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2753 RA Kumar Y.; RT ; RL Submitted (05-APR-2010) to the INSDC. RL Kumar Y., Plant Virus Lab, Institute of Himalayan Bioresource Technology, RL PO Box 6, Plant Virus Lab, IHBT (CSIR), Palampur, Himachal Pradesh, 176061, RL INDIA. XX RN [2] RX AGRICOLA; IND44573342. RA Kumar Y., Hallan V., Zaidi A.A.; RT "First report of Ageratum enation virus infecting Crassocephalum RT crepidioides (Benth.) S. Moore and Ageratum conyzoides L. in India"; RL J. Gen. Plant Pathol. 77(3):214-216(2011). XX DR MD5; 921db2de7ba44ab9defde8e87abb4f35. DR EuropePMC; PMC4353908; 25674770. XX FH Key Location/Qualifiers FH FT source 1..2753 FT /organism="Ageratum enation virus" FT /isolate="Palampur" FT /mol_type="genomic DNA" FT /country="India:Palampur" FT /collected_by="Yogesh Kumar" FT /collection_date="08-Oct-2009" FT /identified_by="Yogesh Kumar" FT /clone="UwuA" FT /tissue_type="leaf" FT /db_xref="taxon:188333" FT CDS 138..494 FT /gene="V2" FT /product="pre-coat protein" FT /db_xref="GOA:D1GV11" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:D1GV11" FT /protein_id="CBL51929.1" FT /translation="MWDPLVNEFPETVHGFRCMLAVKYLQLVEKTYSPDTLGYDLIRDL FT ISVIRARNYVEATSRYNHFHARFEGTSPSQLRQPICEPCCCPHCPRHQSKSMGEQAHEQ FT KAQDVQDVQKSRCP" FT CDS 298..1068 FT /gene="V1" FT /product="coat protein" FT /db_xref="GOA:D1GV12" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:D1GV12" FT /protein_id="CBL51930.1" FT /translation="MSKRPADIIISTPASKVRRRLNFDSPYVSRAAAPIVRVTKARAWA FT NRPMNRKPRMYRMYRSPDVPRGCEGPCKVQSFESRHDIQHIGKVMCVSDVTRGTGLTHR FT VGKRFCVKSVYVLGKIWMDENIKTKNHTNSVMFFLVRDRRPVDKPQDFGEVFNMFDNEP FT STATVKNVHRDRYQVLRKWHATVTGGQYASKEQALVKKFVRVNNYVVYNQQEAGKYENH FT SENALMLYMACTHASNPVYATLKIRIYFYDSVTN" FT CDS complement(1065..1469) FT /gene="C3" FT /product="replication enhancer protein" FT /db_xref="GOA:D1GV13" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:D1GV13" FT /protein_id="CBL51931.1" FT /translation="MDSRTGELITAAQAENGVFIWEIQNPLYFKITEHHNRPFLMKEDI FT ITVQIQFNYNLRKALGIHKCFLIYRIWMTSQPQTGRFLRVFKTQVLKYLNNLGVISINN FT VIRSVDHVLWDVLEHIVYVEQSYSIKFNIY" FT CDS complement(1210..1614) FT /gene="C2" FT /product="transcription activator protein" FT /db_xref="GOA:D1GV14" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:D1GV14" FT /protein_id="CBL51932.1" FT /translation="MRSSSPSKAHSTQVPIKVQHRLAKKGTRRRRVDLPCGCSYFIALA FT CQNHGFTHRGTHHCSSSREWRVYLGNSKSPVFQDNRTPQPTISHERGHHHRPNTVQLQP FT EESVGDTQMFSNLPNLDDFTASDWSFLKGL" FT CDS complement(1517..2602) FT /gene="C1" FT /product="replication-associated protein" FT /db_xref="GOA:E1V2J1" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:E1V2J1" FT /protein_id="CBL51933.1" FT /translation="MAPPKRFQIYAKNFFLTYPQCSLTKEEALSQIQNLQTPVNKKYIK FT ICRELHENGEPHLHVLIQFEGKYKCQNNRFFDLVSPTRSAHFHPNIQGAKSSTDVKSYI FT DKDGDTLEWGEFQIDGRSARGGQQTANDAAAEALNAGSKKAAMAIIKEKLPEKFIFQYH FT NLNANLDRIFTPPLEVYVSPFLSSSFDQVPEELEEWVSENVMAAAARPLRPQSIVIEGD FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEFLDEEKNNALKNWALKNAIFVTLEGPL FT YSGSNQSAAQASQEGDEASTC" FT CDS complement(2188..2445) FT /gene="C4" FT /product="C4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:E1V2J2" FT /protein_id="CBL51934.1" FT /translation="MGNLIFTCLSSSKENTNAKITDSSTWYPQPDQHISIRTFRELNPA FT PTSSPTSTRTETPSNGENSRSMEDLHEEVNRQLMMLLQKP" XX SQ Sequence 2753 BP; 760 A; 529 C; 612 G; 852 T; 0 other; accggatggc cgcgattttt ttaaagtggt ccccacaact gacaaagaca tgtccaccaa 60 tcaaaaccgt cgctcaaagc ttaattgttt tgtggtccct tatttaaact tgctcagcaa 120 gtagtgcact ccgcactatg tgggatccat tagttaacga gtttcctgaa accgttcacg 180 gctttaggtg tatgttagca gttaaatatc tacagttagt agagaagact tattctcctg 240 acacattagg gtacgattta attagggatt taatttcagt aattagggcc agaaattatg 300 tcgaagcgac cagcagatat aatcatttcc acgcccgctt cgaaggtacg tcgccgtctc 360 aacttcgaca gcccatatgt gagccgtgct gctgccccca ttgtccgcgt caccaaagca 420 agagcatggg cgaacaggcc catgaacaga aagcccagga tgtacaggat gtacagaagt 480 ccagatgtcc ctagaggatg tgaaggccca tgtaaggtcc agtcgtttga gtccagacat 540 gacattcagc atataggtaa agtcatgtgt gtcagtgatg ttacccgtgg aactgggctg 600 acccaccgag tgggtaaaag gttttgtgtt aaatccgttt atgtcttggg taagatatgg 660 atggacgaga atattaagac taaaaatcac acgaatagtg tgatgttttt tttagttagg 720 gatcgtagac ctgtggataa acctcaagat tttggagagg tttttaacat gtttgataat 780 gagcccagta cggccactgt gaagaatgtt catcgtgata ggtatcaagt gcttcggaaa 840 tggcatgcaa ctgttacggg tggacaatat gcgtcaaagg aacaagctct tgtgaagaag 900 tttgttaggg ttaataatta tgttgtgtat aaccagcaag aagctggcaa gtatgaaaat 960 cattctgaga atgcgttaat gttgtatatg gcatgtactc atgcctctaa cccagtgtat 1020 gctactttga agatacggat ctatttttat gattccgtaa caaattaata aatattaaat 1080 tttattgaat atgattgttc tacatataca atgtgttcta atacatccca taaaacatga 1140 tcaactgatc tgattacatt attaatactg ataactccta aattatttaa atattttaaa 1200 acttgagtct taaagaccct taagaaacga ccagtctgag gctgtgaagt catccagatt 1260 cggtagatta gaaaacattt gtgtatcccc aacgctttcc tcaggttgta gttgaactgt 1320 atttggacgg tgatgatgtc ctctttcatg agaaatggtc ggttgtggtg ttctgttatc 1380 ttgaaataca ggggattttg aatttcccag ataaacacgc cattctctgc ttgagctgca 1440 gtgatgagtt cccctgtgcg tgaatccatg gttttggcag gctaatgcta tgaagtatga 1500 acacccacaa gggagatcaa cacgtcgacg cctcgtcccc ttcttggcta gcctgtgctg 1560 cactttgatt ggaacctgag tagagtgggc cttcgagggt gacgaagatc gcattcttta 1620 aagcccaatt tttgagtgca ttattcttct cttcatccaa gaactcttta taacttgaat 1680 taggtcctgg attgcagagg aagatagtgg gaattccgcc tttaatttga actggctttc 1740 cgtacttggt atttgattgc cagtcccttt gggcccccat gaattcctta aagtgcttta 1800 ggtagtgggg atcaacgtca tcgatgacgt tataccacgc atcattgctg taaactttgg 1860 ggcttagatc taaatgaccg cataggtaat tatgaggccc taatgaccta gcccacatcg 1920 ttttacccgt acgactgtct ccctcaatta ctatactttg aggcctcaga ggccgcgcag 1980 cggcagccat gacattttct gagacccatt cttcaagttc ttcaggaact tgatcaaaag 2040 aagaagataa aaaaggtgaa acataaacct ccaacggagg agtaaaaatc ctatctaaat 2100 tagcatttaa attatgatat tgaaaaataa atttttctgg gagtttctcc tttattatag 2160 ccattgcagc ctttttagaa cctgcattta gggcttctgc agcagcatca ttagctgtct 2220 gttgacctcc tcgtgcagat cttccatcga tctggaattc tccccattcg agggtgtctc 2280 cgtccttgtc gatgtaggac ttgacgtcgg tgctggattt agctccctga atgttcggat 2340 ggaaatgtgc tgatctggtt ggggatacca ggtcgaagaa tctgttattt tggcatttgt 2400 attttccttc gaactggata agcacgtgaa gatgaggttc cccattttcg tgaagctctc 2460 tgcagatttt gatatatttt ttgtttactg gggtttgtag gttttggatt tgggaaagtg 2520 cttcttcttt agtaagagag cattgtggat aagtgagaaa gaaatttttg gcatatattt 2580 gaaatcgttt tggaggagcc attgacttgg tcaatcggta ctcagctcta gtcttatgtc 2640 aatcggtgat cagtactcaa tatatagtga gtaccgaatg gcattattcg taattctgaa 2700 aagaaattca aaattcaaat ttgaaatcca aaagcggcca tccgtataat att 2753 //