ID FN691935; SV 1; linear; genomic RNA; STD; VRL; 5821 BP. XX AC FN691935; XX DT 29-MAR-2011 (Rel. 108, Created) DT 03-MAY-2011 (Rel. 108, Last updated, Version 3) XX DE Grapevine Bulgarian latent virus segment 2, complete sequence, isolate DE Serb1 XX KW complete genome. XX OS Grapevine Bulgarian latent virus OC Viruses; Riboviria; Picornavirales; Secoviridae; Comovirinae; Nepovirus. XX RN [1] RP 1-5821 RA Elbeaino T.; RT ; RL Submitted (29-MAR-2010) to the INSDC. RL Elbeaino T., Istituto Agronomico Mediterraneo di Bari, IPM-Virology, Via RL Ceglie 9, Valenzano-Bari, ITALY. XX RN [2] RX DOI; 10.1007/s00705-010-0908-5. RX PUBMED; 21243380. RA Elbeaino T., Digiaro M., Fallanaj F., Kuzmanovic S., Martelli G.P.; RT "Complete nucleotide sequence and genome organisation of grapevine RT Bulgarian latent virus"; RL Arch. Virol. 156(5):875-879(2011). XX DR MD5; a290d423df79bf1da2d1d679b7175a9a. XX FH Key Location/Qualifiers FH FT source 1..5821 FT /organism="Grapevine Bulgarian latent virus" FT /host="Vitis vinifera" FT /isolate="Serb1" FT /mol_type="genomic RNA" FT /country="Serbia" FT /isolation_source="host phloematic tissue" FT /collected_by="Elbeaino T." FT /collection_date="15-Feb-2009" FT /identified_by="Elbeaino Toufic" FT /db_xref="taxon:748667" FT CDS 190..4689 FT /transl_table=1 FT /gene="RNA2" FT /product="polyprotein segment 2" FT /db_xref="GOA:F2Q9W2" FT /db_xref="InterPro:IPR005054" FT /db_xref="InterPro:IPR005305" FT /db_xref="InterPro:IPR005306" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:F2Q9W2" FT /protein_id="CBL43396.1" FT /translation="MCGGGTSTQLPTGCGTLCGAKTPYSKRGLAAAIRDGDLSGPEGRC FT VYCGALAQIEKGAPQPKTATGPKCSCWRTAVARCPKHGAQPTPARVGKQSAPELKKERV FT ELPYKKQTCAVVVQVGPLELVYPALVSEEKEPRSAASPLKEDEYVPMGLTLAEAPEWLA FT YPLECRPYTNAAPAAKPVSQREEFALIKRRLVKLGKEKMRLAYRKRQDKLVAEKKARAA FT YQRKYDALLPLVREARAHIECEQIIRDLRATERQPLTPAQHELVSKSCRLAGEERASME FT AFLLGAKARRHRVCPHVAPREEIESPRVVPSCTTPWSGLGMTLTSLRDGGSSDATLGVK FT SLASRQGDYTCNSALGFPTKSYAVAIMASSLERARKVVRATINFARGVKTLPRKMLEVA FT SKIKTKVLSVQQKVAPEVVDKCTIVPDIGQVPQEVVVKQTNWNGIQLPEMGVRNIYAFH FT DDSWSASPEEDEKYTIPWSNRCGPCVHAVIPTTKVPYDDCWYMASSCRTVRQGIRELEK FT AIIGLYLGAKEERAEELARQTKEPEVQLEVQRETVVKQINEPCVQRVVLVESPEQIAER FT ARQTAYEAEIAAQRRRQQIDFWYIPLSMKMLLKEPEMQSEVQRVDVVKETKEPDVQHQV FT APTAEDKQPQPLDEEELVDCESDDEPDFSWVMDKYGITRPYLTMTPIKRESRGAYFANL FT RVGSHAFYIEQCRRRNKLSREMCMVKRTCALPQTFRYIIRPKDPDRREYELFQTMVTKK FT IAANELEVRVPRYNPDGIGTRLDIDNHFIYRAECLEDCQWNESTVQAPIENCTPMDDKK FT GGHPFVPFSLPIQMRGDFRSGGRLLRSLLNFTPFGDLTCNSALGETSEIQSGCKTVMWM FT PFHQYTLSRQLATRKSKVSGAGENRVADKKQLTERMVFHQPGVLSRMQNQEPQKLNRIG FT STRSFRMPAVGMPNMTGRVTIPVQARPRATTLIRDGEEVTPARFSTCNSALLADTSIAY FT IEQGWCPKDATAGRVLEAINLREEIATGDNLVKYDWLAKGMIEPDMSVRLTVGQNPFVG FT ISIGVCCDFSGRLAQYYDGATAIPIEICNQLPNFVCPISERSVFVHKINMLLAGYNLFQ FT TQKHFADPYILVYIIDTNTLSASDEWGYTIELCVHSSVHTTQFARTPFLTLPGTFDGTL FT PLDLWRGPFSFKTGKSAPREERIGINFGSKRTYNSGAKEFYSLPAAHIQLLQSVGGILH FT GSVIQTGSRAISCELYMILQPDKTANNLEQAVKLPGCRVPTGGGPFSLRIQSAFLRSQI FT YETGVQLVIYALGGPLGAATISAPYQYMVHFSHITEEEGFVPRPIGTILEFNWATLAQL FT TLKDRFQIPARLSDLVIPGVSVHMRSNPLASIIGACGFFRGHVTFILQWSLNVEHVKPK FT TYMQVQTCVGTFIPAPVKHSQILQSWVVPISQRFELRVPFDLVDYPGFNSSGGIGLDHM FT QPFIDIACGDFSQLEYFNINVELKPGFEIYGRSVTPLK" FT mat_peptide 190..1719 FT /gene="RNA2" FT /product="hypothetical protein (HP)" FT mat_peptide 1720..3165 FT /gene="RNA2" FT /product="movement protein (MP)" FT mat_peptide 3166..4689 FT /gene="RNA2" FT /product="capsid protein (CP)" XX SQ Sequence 5821 BP; 1516 A; 1250 C; 1452 G; 1603 T; 0 other; cttcagccaa agtgagtccc tgctacgaaa tttcctctag ctctgatcct atatctatag 60 gatattttct tcttgtgatt cctacacatt atttttggtg ctatcgctat ttcctcgcca 120 agcttttcaa gttaatattt ctttctctct atcatattct attgtcattg atattccttt 180 aatgtattga tgtgtggggg ggggactagc acccagttgc caactgggtg tggaacacta 240 tgtggggcga aaaccccata tagtaaacgt ggcctcgcgg ctgccatccg cgatggtgat 300 cttagcggcc ctgaaggccg ctgcgtatat tgtggtgcgc tcgcccaaat tgaaaagggt 360 gcaccacagc ccaaaacagc tactgggcct aaatgtagct gctggcgcac tgctgtcgcc 420 aggtgtccca aacatggggc acaaccaact cctgcaaggg ttggaaagca gagcgctcct 480 gagcttaaga aggagagggt tgagcttccc tacaaaaagc agacttgcgc tgttgtggtg 540 caagttggtc cactagagtt ggtttatcca gctcttgtgt ctgaggagaa ggagcctcgg 600 agtgctgcct ccccacttaa ggaggatgag tatgtcccta tgggactcac tttggctgaa 660 gcgccagagt ggttggccta ccctcttgag tgtaggccat atactaacgc tgctcctgca 720 gcgaaacccg tgtctcaacg ggaagagttc gccctcatta aaaggcgcct tgtcaaactt 780 ggcaaggaaa agatgcggtt ggcctaccgc aagcgacaag acaaacttgt cgccgaaaag 840 aaggcccgtg ctgcgtacca acggaagtac gatgcgttac tcccactggt cagggaggcg 900 cgagctcaca ttgaatgtga gcaaattata agggacctcc gtgctacgga gagacaaccc 960 ttgaccccag ctcaacatga gctggtttct aaatcctgtc ggctggcagg tgaggagagg 1020 gcttctatgg aggcctttct tctaggcgcc aaggctaggc gtcaccgtgt gtgccctcat 1080 gtggcaccac gggaggagat tgaatctccc cgagttgtgc cgagttgcac aaccccctgg 1140 tcagggcttg gaatgaccct aacctccctt cgcgatggag gttcgagtga tgcgactctt 1200 ggagtcaaat cactagcgtc ccggcaaggg gattatactt gcaattcagc tcttggcttt 1260 cctaccaaga gctatgctgt ggcaatcatg gcatctagct tggaaagagc taggaaagtc 1320 gtgcgtgcga ctataaactt cgcgaggggt gttaaaactc ttcctaggaa gatgttagaa 1380 gtagcatcta aaattaaaac taaagttctt tctgtgcaac agaaagtcgc accagaagtg 1440 gtggataagt gtactattgt ccctgacatt ggtcaggtcc cacaagaagt tgtggtaaaa 1500 caaactaact ggaatggaat ccagctccca gagatgggag taagaaatat ctatgctttc 1560 catgatgatt catggtctgc tagtccagag gaggacgaaa aatacaccat tccttggagc 1620 aatcgatgtg gaccatgtgt tcatgcggtt attccaacaa ctaaggtgcc atatgacgat 1680 tgttggtata tggctagtag ttgtcgaaca gtacgccagg ggatccgtga acttgaaaaa 1740 gctatcattg gtctctattt gggtgctaaa gaggaacgag ctgaagagct tgcaagacaa 1800 actaaggaac ctgaagtgca acttgaggtc caacgggaaa ccgttgtaaa acaaattaat 1860 gaaccatgtg tgcaacgtgt ggtcctggtt gaatcaccag agcaaattgc tgaacgagcg 1920 cgccagaccg cttatgaagc tgagattgca gcgcagagga ggagacaaca gattgatttc 1980 tggtatatac ccctctccat gaagatgcta ctaaaggagc ctgagatgca atctgaggtc 2040 caacgtgtag acgttgttaa agaaactaag gaacccgatg tgcaacatca ggtcgctcca 2100 actgcggagg ataaacaacc acagcccttg gatgaggagg agctcgttga ttgcgaaagt 2160 gatgatgaac ccgacttttc ctgggttatg gacaagtatg gtattactcg accatatttg 2220 acaatgactc ctatcaaaag ggagagcaga ggagcgtact tcgcaaattt gcgtgttggc 2280 tcccatgctt tctatattga acagtgtcga aggaggaata aattatctag agagatgtgc 2340 atggttaagc gcacttgcgc cttaccacag acctttaggt atattattcg gcccaaagac 2400 cctgatagga gagagtacga gttgttccaa accatggtaa caaagaaaat tgcggcaaat 2460 gagctggaag ttcgagtgcc gcgatataat cctgatggta ttggaacacg cttggacatt 2520 gacaatcatt ttatttatcg agctgaatgt ttagaagatt gtcagtggaa tgaaagtacg 2580 gtgcaagctc caattgaaaa ttgcactcct atggatgaca aaaaaggggg tcatccattt 2640 gtacctttct ccttaccgat ccaaatgcgt ggtgattttc gcagtggagg ccgtcttctt 2700 cgatctctac tcaatttcac tccatttggt gatttgactt gtaattccgc tttaggggag 2760 acctctgaaa ttcagagcgg atgcaagacc gtgatgtgga tgccattcca tcaatacacg 2820 ctctccagac agcttgccac tcgtaagagt aaggtgagtg gagctggaga gaatagggtt 2880 gctgataaaa agcaactaac agagagaatg gtgttccatc aaccgggcgt gctctcccgg 2940 atgcaaaatc aagagccaca aaaactgaac aggattgggt ccacccgttc gtttcgcatg 3000 cctgctgtag gtatgcctaa tatgacggga cgcgtaacca ttcctgttca ggcgcgacca 3060 agagccacca ctctcatacg ggatggtgaa gaagtcactc ctgcgcgttt ctcgacgtgt 3120 aatagtgccc ttttagccga taccagcatt gcttacattg agcaagggtg gtgtcccaag 3180 gatgccacgg ctggtagagt cttagaggct ataaatctca gggaagagat tgcaacagga 3240 gacaatttgg ttaaatatga ttggcttgcg aaaggcatga ttgaaccaga tatgtctgtg 3300 cgtcttaccg ttggacaaaa ccccttcgtg ggaatttcca tcggtgtttg ttgtgatttt 3360 tccgggcgat tggcacaata ctatgatggt gcaactgcga taccaattga aatatgtaat 3420 cagttgccaa attttgtgtg tccaatttct gagaggagtg tctttgtaca taagattaat 3480 atgctccttg cgggttacaa tttgtttcag acccagaaac attttgcgga cccgtatatt 3540 ttagtataca ttatagacac taacactttg tcagctagtg atgagtgggg gtatactatc 3600 gagttgtgtg ttcatagtag tgtacatact acacaattcg ctcgcacacc cttcctcacg 3660 ctgcctggca ctttcgatgg aactttacca ttggaccttt ggcgtggccc tttttccttc 3720 aaaacgggaa agagtgctcc tcgagaggaa cgcattggta ttaattttgg ctccaaacgc 3780 acatataata gcggagccaa agagttttac tcgcttccag cagcccatat tcaactttta 3840 cagagtgtgg gaggcatttt gcatggaagc gttatccaga ctggtagtag ggccatatca 3900 tgtgagctct acatgatttt acagccagat aagactgcta ataatttgga gcaggctgtg 3960 aaactaccag gatgtcgagt gcccacgggg gggggtcctt tttccttgcg tatacaatca 4020 gcttttttgc gatcccagat ctatgagacg ggagtacaat tggtgattta cgctcttggt 4080 gggcccctgg gcgctgcaac gattagcgct ccctatcaat acatggtaca tttctcacac 4140 attacggagg aagagggatt tgtaccacgt cctataggaa ccattctgga atttaattgg 4200 gcaactttgg cacagttgac cctcaaagat aggttccaaa taccagctcg actgagtgat 4260 ctggtcatac cgggtgtctc tgtccacatg cgcagtaatc ctctagcttc cattatagga 4320 gcttgtgggt tctttcgcgg acatgtgacc tttatattgc aatggtcact caatgttgag 4380 catgtcaagc cgaagacgta tatgcaggtt caaacctgtg tgggcacttt catccccgct 4440 cctgttaaac actctcaaat tttgcagagc tgggttgtgc ctattagtca acggtttgag 4500 ttacgtgtgc ccttcgattt agtcgattat cctgggttta atagttcagg tgggataggt 4560 ctcgatcaca tgcaaccttt catagatatt gcgtgtggag acttttctca gttggaatat 4620 tttaatatca acgttgaact caaaccagga tttgagatat acggtcgaag cgtaacgcca 4680 cttaagtgag acaagtggag ttgcgattgt tgcagtcagt tttggagtct catcctttct 4740 ctgtaggtaa cagagggtct agtccgcctt aaggactagc aagggttggc atcgcttagc 4800 gagatgtgaa gaccggagta acgcaccggg agaccccaga cttacgtctg ccccatgagc 4860 acatgggttg caatcattta tgttgcttgt atgtataaat acgcatctta tcattttata 4920 cgtattcaca tagaatcgac aaatcttata gttttcaata aacccacata aactgtcact 4980 aatagagtgg catacggttg agttctttag gacgccttcc gttccgtgaa atcggtatac 5040 gtgtgaagat agggatgctc atccattaaa tgagctaggt tgttggagcc gatctgagtc 5100 caaccgcatt ttgtcacttt agatataagt gacccggtct actgcttccg agccggtata 5160 aatcttaaag cgcccaggcg tccatgactt catggcacgg ggacgtagat taagtcatct 5220 acagaaaaat gacttcgcct ttgattatgt ggccgtgatg gacatatcct ctcatctttc 5280 agagagtata tctttgtttt agtacccgtg atgaatgtag ttttgaaact actggaggtc 5340 tcagagaaga agcgttttgc caaacgacat tggctcaagg tctatacgac gttaatttga 5400 tagtgtactc aagaagttga ggggtggcac ccttgctttg gatgaggtcc ggagataaaa 5460 accggggggt aattaacccc agctatcggt ataggctgac ccccatgagg gagctcatgg 5520 cgcattttgg tgacttttta gacataaagt cccatttatg tagtagcgca aggcgctggt 5580 gttgaatgtt attgaacctg gcgttgcagc gcctgctttt caagattgga cgtgattacc 5640 atgagaagag ggatttatac aacaaccccc ttgtgttgct ttgttttttt tactgttttt 5700 ttagactcct gtgagcatta agcaaaagca ggtcgaacct tcagtaagtt cacaaaaata 5760 tttgtatttt tttttgtgag agtttgtgat ttatatttat atctctttgt ttttttcacg 5820 a 5821 //