ID FN691934; SV 1; linear; genomic RNA; STD; VRL; 7452 BP. XX AC FN691934; XX DT 29-MAR-2011 (Rel. 108, Created) DT 03-MAY-2011 (Rel. 108, Last updated, Version 2) XX DE Grapevine Bulgarian latent virus segment 1, complete sequence, isolate DE Serb1 XX KW complete genome. XX OS Grapevine Bulgarian latent virus OC Viruses; Riboviria; Picornavirales; Secoviridae; Comovirinae; Nepovirus. XX RN [1] RP 1-7452 RA Elbeaino T.; RT ; RL Submitted (29-MAR-2010) to the INSDC. RL Elbeaino T., Istituto Agronomico Mediterraneo di Bari, IPM-Virology, Via RL Ceglie 9, Valenzano-Bari, ITALY. XX RN [2] RX DOI; 10.1007/s00705-010-0908-5. RX PUBMED; 21243380. RA Elbeaino T., Digiaro M., Fallanaj F., Kuzmanovic S., Martelli G.P.; RT "Complete nucleotide sequence and genome organisation of grapevine RT Bulgarian latent virus"; RL Arch. Virol. 156(5):875-879(2011). XX DR MD5; be07b621b0e5a13ec113530ab5a4cbaf. XX FH Key Location/Qualifiers FH FT source 1..7452 FT /organism="Grapevine Bulgarian latent virus" FT /host="Vitis vinifera" FT /isolate="Serb1" FT /mol_type="genomic RNA" FT /country="Serbia" FT /isolation_source="host phloematic tissue" FT /collected_by="Elbeaino T." FT /collection_date="15-Feb-2009" FT /identified_by="Elbeaino Toufic" FT /db_xref="taxon:748667" FT CDS 88..6375 FT /transl_table=1 FT /gene="RNA1" FT /product="polyprotein segment 1" FT /db_xref="GOA:F2Q9W1" FT /db_xref="InterPro:IPR000605" FT /db_xref="InterPro:IPR001205" FT /db_xref="InterPro:IPR007094" FT /db_xref="InterPro:IPR014759" FT /db_xref="UniProtKB/TrEMBL:F2Q9W1" FT /protein_id="CBL43395.1" FT /translation="MATFKMGSVVLTPCFLAKERELVHQLLRSSSSFAVTFLAQGASLK FT PIMVARAIINGVIAIDTENFGFVDQTWSEAARVVRRYSLAHSKYCRKVRERSARRFAER FT KAARKAAGVKAACKRILASLDADLPCSGRLMWAIKRAHREDFASRMKTAEICRMIRASK FT REERAYRAQYAALEVRRPVSMRVPYVCPLVANREEVAGEPLRGRAFERTPRSTSFSASP FT LPRMRSPYEAEIAPLFGACDRASRLELHPDIKFFFREAPNHASSLGDVESLARLARCTI FT AYFKLFPCALYFEPLRRLKPQSTTDEIDKCANGLEMELDRLREISVSDLHANGLGTFIA FT GIAAGAATATGAVVGTTVAGGKYLIDHAAAAFDKSCNKVVETVELATRKFGETMLDMVR FT KTFDSCLGPYLATVSHAREQIETYWRRVTQWIKTMWSKLSIEVQALFDSTWWALGLILC FT AGVVVLAEHMLVALGVLTHAGALTSLFITAFVGYLGWNFAAPATEAEGTLLTTLRALVH FT IVVEKPMSVFRSDQTANAPNVLEFPLRVLETLGNGLVSAPLGHSNMLGNMELLWINPQG FT KDAMKDLLMCFDCIADSWDYMTGRKDSFFREIASMTKVDIVPWIKSAQQIVLEAQTVAV FT TDPVLMDTITHLLYKGHILQRTLAGAKRATSLDYGRVVSSLVQELTKIRAQCARAGIFE FT GRRCEPFWTYIYGPSHCGKSLFMEEVTRRLLKENGHALNDIYAKNARDPYWSGYLRQAA FT VQIDDLSACVTEPSVESEFLQTIGSKDYKLNMAAVEDKGMSFNSSLFITTSNVFTAPTD FT ARILDKNAYNNRRGAVVQCRRAPGVDFDARNPSGSCEARLVDPNDETPKSEWANCSKVL FT EEVVHLNNAHRLKELMLMANYRERNDTLHPVHSGARNFLRSCTKSLALGNLVCDGVIYV FT IDRETATCEATKEKPTSGYEQTAQHFVASLRQEISNRACDGMLNTFLNGLIEGPCEVKS FT VDALNEAATSSQKEFFLELPLLERVYLRILQRQLSAIREMPDFAFNMNVRERILASLRV FT GYNTVCEHGGKLLTIVAALVLILVIYSSFFCIYRTSIAGPTDGVAALVAVGALTANAGS FT VSSVYSSSDGGLSKFSRNTPINYRSAASSDFRANSGGDDEFLMSLLLWLETPGGGLISC FT IRGKGRYIYLTAHQAEQIPDGARVFARTRSANGVVHTVQLLWDAKQVRRYSDTEAVTYH FT DARFTALPEPIKSAFECDIDQLPTLFDMNVVLVKRKSAMRQVDPTLAALPAEQPIIDCW FT KSNGKLNREMVGFNTYAYGGSYRNEIPVSIVSKCKTYAEDCGAILTTMWKGKRRVIGMH FT VASGYKNGTQNPKDWTSTATLLPGIADLECNSGLNMVEESGVSYEGYRKIGYLPRMADR FT PYQSGKTMFVPVPEEMMYIPTNLSERFSDGTERKVEVEIKQPAILSASDPRIPEGVSYD FT PLKNGMEKFKKPMDLLDDALCAEIANDIAESWHDCFDSLEDCSDEVAINGAEDEFFDKF FT NMTTSEGYPWVKQRGIGESGKLRYFEETVNGQLALRKDTPVYKAYHDLQELSKVEVPEL FT ICIETPKDECLPLRKITLKPKTRLFSILPLEMNLLLRKKFLSFAANLQQNRDKLPTQVG FT VDPYSREWGHIYSRLRSKNSVAVNCDYASFDGLITAQILKHIGIAINSVYVGSPESKRQ FT RANLLMAIVNRKSICGSQVYEVAAGIPSGCALTVLLNSIFNEMLIRYVWKISVGGVPRE FT MFSTYVTLIVYGDDNLISVHPEFLPHFNGMVIQAKLKEVGVTITDGSDKTAEGIYEKPF FT EKLDFLKRRFAKQSDGTVLAPLDLASIFTSLQNVTLGAGSIPEAVRINVHVALTELYLH FT QKREWYDDLRNHYQKTQGWENLPTWAQSHAFHREHLTGALPWAPHRVMDIPVDKKKLTQ FT AMQSQGGLDFVVQVAERIFVCGPAFRPDATEQGSFVVSHTGSLPRGLQGCLSPVDFVSE FT GQGRLPTQLWVNKFRSERHHLTCLIRDAYNRGCNVYFRAEQPYIVNWLSATSFAMGLGK FT DYRAILHLYHNVCTPNAQCLDPYFEARRFQRVDAYVAPPFHHRR" FT mat_peptide 88..1812 FT /gene="RNA1" FT /product="viral protease co-factor (Pro-Cofact)" FT mat_peptide 1813..3399 FT /gene="RNA1" FT /product="protein containing nucleotide-binding motif FT (NTB)" FT mat_peptide 3400..3627 FT /gene="RNA1" FT /product="virion protein genome-linked (VPg)" FT mat_peptide 3628..4302 FT /gene="RNA1" FT /product="cysteine-like protease (Cyst-Pro)" FT mat_peptide 4303..6375 FT /gene="RNA1" FT /product="RNA-dependent RNA-polymerase (RdRp)" XX SQ Sequence 7452 BP; 1829 A; 1575 C; 1965 G; 2083 T; 0 other; ccaagagtgg agcatgcggg ggggggggac ggcccggttg aaaatctcgt gtgtgaattt 60 cttctttgct ctcttatttg ttgcaacatg gcaactttta agatgggatc cgttgtgctt 120 acaccttgtt ttcttgcaaa agaacgagaa ctggtgcatc aacttttacg ttcgtcttct 180 tcttttgccg ttactttttt ggctcaaggt gcctccttga agcccatcat ggtggctcgt 240 gccatcatta acggtgtcat tgccattgac accgagaact ttggctttgt agaccaaact 300 tggtccgagg ctgcacgagt ggtgcgccga tattcattgg cccactcaaa gtactgcagg 360 aaggttcgcg agcgctctgc aaggcgcttt gctgaaagga aagctgccag gaaggcagct 420 ggtgtgaagg ccgcctgcaa gcggatacta gcatctcttg atgccgacct cccttgttct 480 gggaggctga tgtgggccat taaaagagcc caccgcgagg atttcgcctc gcgaatgaaa 540 acggcagaaa tttgccgtat gatcagagcc tccaaaaggg aggaaagagc ctatagggct 600 cagtatgccg cacttgaagt gcgaagaccc gtttcaatgc gggtgcccta tgtttgcccc 660 ctggtggcaa acagagaaga ggtggctggg gagccactta gaggtcgcgc ttttgagcgc 720 accccacgca gcacttcctt tagtgcatct cctctccctc gtatgcggtc accatatgag 780 gctgaaattg ctcctctctt tggagcttgt gatcgtgcat cccgtctgga gttgcatcca 840 gatataaaat ttttctttag agaagcgccc aatcatgctt cttctttggg ggatgtggaa 900 agccttgctc gcttggcgag gtgtacaatt gcgtatttta aactttttcc atgcgcattg 960 tactttgagc cgctgcgtcg actcaaacct cagagcacaa ctgatgagat tgacaagtgt 1020 gcaaatggtc tagagatgga actggaccgc ctccgtgaaa tatcagtttc ggatctccat 1080 gccaatgggc ttggaacgtt catagctggt attgcagctg gcgctgctac tgccactgga 1140 gccgttgttg gcaccaccgt agctggtgga aagtatctaa ttgatcacgc agctgcagct 1200 tttgataaga gctgcaacaa agtggttgaa acagttgaac tggccacgcg gaagtttgga 1260 gagaccatgc ttgacatggt caggaaaaca ttcgactctt gccttggacc ttacttggct 1320 actgtgtctc acgcccgtga acaaattgaa acctattggc gtagagtgac acagtggatc 1380 aaaacaatgt ggagcaagtt gtcgattgaa gttcaagccc tatttgattc tacatggtgg 1440 gctcttggac tgatcctctg cgctggggtg gttgtgcttg ctgagcatat gctggtggcc 1500 ctcggtgtgt taacgcacgc cggagctcta acatccttat ttatcaccgc atttgtgggg 1560 tatttgggat ggaattttgc agcacccgcc acagaagcgg aaggaacgtt actcaccaca 1620 ttgcgtgccc tcgtgcatat tgtggttgag aagccaatgt cggtttttcg ctcagaccag 1680 acagcaaatg ctcccaacgt tttggagttt ccactcaggg tgctcgaaac actcggtaac 1740 gggttagttt ctgcgcccct tggacactcc aatatgttgg gaaatatgga gctgctatgg 1800 atcaatccgc aagggaaaga cgccatgaaa gatttattga tgtgttttga ttgcatagcg 1860 gattcttggg attatatgac tggtcgtaag gatagtttct ttcgagaaat tgcctcaatg 1920 actaaggttg atatagtccc ctggatcaag agcgctcagc agattgtgtt ggaggcacaa 1980 actgttgctg taacggaccc tgtccttatg gacacgatta cacatttact atacaagggt 2040 catatactcc aacggacgtt ggccggtgcg aagcgcgcca cttcactcga ttacggacga 2100 gtcgtgtctt ctcttgttca agagttgact aagattcgcg cccagtgtgc gcgcgcaggc 2160 atctttgagg gtcggaggtg tgagcctttt tggacttaca tctacgggcc ttcgcattgt 2220 ggaaagtcac tttttatgga ggaagtgaca cggcgtttat tgaaagagaa tggccatgct 2280 cttaatgata tatacgccaa aaatgctcgt gatccatact ggtcaggtta cttgcgacag 2340 gctgctgtac aaattgatga tttatcagcc tgcgtaactg aaccttcggt cgagtctgag 2400 tttctccaaa caattggatc caaggactac aagcttaaca tggctgcggt agaggacaaa 2460 ggaatgtctt tcaatagctc cttgttcatc actacatcca atgtgttcac tgcgcctacc 2520 gacgctagaa ttttggataa aaacgcttac aacaataggc gtggcgcagt agttcagtgt 2580 cgtagagccc caggtgtgga ctttgatgca agaaatcctt ctggatcgtg tgaagcgcgg 2640 ctggtggatc ctaatgatga aacgcctaag tcagagtggg ccaattgttc caaagtgctg 2700 gaggaggtgg tgcacttaaa taatgcgcat cgtctcaagg agttaatgct catggctaat 2760 taccgagagc gcaatgacac tttgcatcct gtgcacagtg gagcgcgtaa tttcctgaga 2820 tcctgtacca agagcttggc tctcgggaat ttggtctgcg atggagttat atatgtaatt 2880 gatcgtgaga cagcaacatg tgaggccaca aaggagaagc caacaagtgg ctatgagcag 2940 acagcacagc acttcgtcgc ttcactccgg caagaaattt cgaaccgggc gtgtgatgga 3000 atgttgaaca cctttttgaa tgggttaatt gaaggtcctt gtgaagtgaa gagcgtagat 3060 gccttaaatg aggcagctac gtcttcgcag aaggagtttt tccttgaatt gcccttactg 3120 gagagagtgt acctgcgaat tttacagagg cagctgtccg caatccgtga gatgcccgac 3180 ttcgccttta acatgaatgt ccgggaaagg attttagcta gccttagagt aggttataac 3240 actgtctgtg aacatggtgg caaattgcta accatagttg cagcattagt tttgattttg 3300 gttatatatt cgtcattctt ttgtatatat agaacctcca ttgctggacc gacagatggt 3360 gtagctgcac ttgttgcggt tggcgcgcta acagctaatg ctggtagtgt gtcaagtgta 3420 tatagtagct ccgatggcgg tttgagtaag ttttctcgca acacccctat caattatagg 3480 agtgctgcaa gcagtgattt tcgtgccaat agtggtgggg atgacgaatt tttgatgtca 3540 ttactactgt ggttggagac tccaggtggt ggccttatat cgtgtattag agggaagggt 3600 cgctacattt atctgaccgc acaccaagcg gaacaaattc ctgatggtgc tcgtgttttt 3660 gctcgcacga gatccgccaa tggtgttgta catacagtgc agcttctatg ggatgcaaaa 3720 caagtcagac gatacagtga cactgaggct gttacctatc atgacgcccg tttcactgcc 3780 ctccctgagc ctatcaagag tgcttttgag tgtgatattg atcaactacc tactttgttt 3840 gatatgaatg tggtattggt caagcgcaag agtgctatgc gacaggtgga tccaacatta 3900 gctgccctac cagcggagca acccattatt gattgctgga aatccaacgg gaagttaaat 3960 cgtgagatgg taggttttaa tacctacgct tacggtggta gctatcgtaa tgagatacca 4020 gtgtcaattg tatcgaaatg caagacgtat gctgaagatt gtggggcaat acttaccact 4080 atgtggaaag ggaaacgccg cgtgattgga atgcacgtcg catcggggta caaaaatggg 4140 acccaaaatc caaaagattg gacctcaaca gccacccttc tcccaggcat tgcagatttg 4200 gagtgtaact ccggattgaa tatggtggaa gagagtggtg ttagttatga ggggtacaga 4260 aagattggct atttgccacg aatggccgac cgcccttacc aatcagggaa aacaatgttc 4320 gttcccgtac ctgaagagat gatgtatata ccgaccaatt tgtcggaaag attctcagat 4380 ggcacggaac gaaaagtgga agtggagatt aagcagccgg caatcctgtc tgctagtgat 4440 ccacgtattc ctgagggagt ctcctatgat ccgttgaaaa atggtatgga gaagtttaag 4500 aagcccatgg atcttctaga tgatgctctc tgtgcagaaa tagctaatga tatagccgag 4560 agctggcatg attgttttga ctcgttggag gattgttcag atgaagttgc catcaatggt 4620 gctgaggatg aattcttcga taagtttaac atgaccacat ctgaagggta tccttgggtg 4680 aaacagaggg ggattggaga aagtgggaaa ttgcgttact ttgaggagac cgttaatggt 4740 caacttgcgt tgcgtaaaga tacacccgtc tataaggcat accatgattt gcaagagctt 4800 tccaaggtag aagtgcctga gctcatttgc attgagacgc ctaaggatga gtgtttgcca 4860 ctcaggaaaa taaccctaaa acccaaaaca cggctctttt ccattctgcc gctggaaatg 4920 aaccttcttc tcaggaaaaa gtttttatct tttgcggcca atttacagca aaatagggat 4980 aaacttccaa cacaagttgg tgttgatcct tattcacgag agtggggcca tatttactct 5040 cgcctccgtt ctaaaaattc tgtggccgtc aattgtgatt atgcttcttt tgacggattg 5100 attacggccc agattttgaa acatattgga attgccatta attctgtata tgttgggagc 5160 ccggagtcga aacgacaaag ggcgaatttg ctaatggcca ttgtgaaccg taagagcatc 5220 tgcggttcac aagtgtatga agttgcagca ggtattcctt cggggtgtgc tttgactgtt 5280 ctgctcaact ccattttcaa tgagatgcta attcgttacg tttggaaaat ttccgtgggt 5340 ggagtaccac gcgaaatgtt ttcaacctat gtaactctga ttgtgtatgg tgatgataat 5400 ctcatttctg tgcacccaga gttcttgccc cacttcaatg gtatggttat tcaagcgaaa 5460 ttgaaagaag tgggggtaac gattacggac gggagtgaca aaactgctga gggcatttac 5520 gaaaagccat ttgaaaaatt ggattttctt aaacgccgct ttgctaaaca aagtgatgga 5580 accgtccttg ctcccctgga tttggcgtcg atatttactt ctttacagaa tgtgacgcta 5640 ggtgcaggat ctattccaga ggctgtgcgt attaacgtac atgtggcact cacagaattg 5700 taccttcacc agaaacgtga gtggtatgat gatctgagga atcactatca aaaaacccag 5760 ggttgggaga acctaccaac ctgggcgcag tctcatgctt tccacaggga acatcttacg 5820 ggagccttgc cctgggcgcc acaccgtgtc atggatatcc cagtggataa gaagaaattg 5880 actcaagcta tgcaaagtca aggtggtctt gattttgtag tacaggtcgc agaacgcatt 5940 tttgtatgtg gtcctgcttt tcggcctgat gctacagaac aaggctcatt tgttgtgagt 6000 catacaggtt cattgccgcg tggtctacag ggttgtttga gcccagtcga cttcgtgagt 6060 gaagggcaag gtcgtttacc tactcagttg tgggtaaata aattcaggtc agagcgtcat 6120 cacctcacgt gtctcatcag ggatgcgtat aacagaggtt gtaatgttta ttttagggcg 6180 gagcaaccct acatagtgaa ctggttgagt gcaactagtt ttgctatggg acttggaaaa 6240 gactataggg ctatattaca tttgtatcat aatgtatgta cgcctaatgc tcagtgcctt 6300 gacccctatt ttgaggcaag gcgcttccag cgggtggacg cttatgttgc accccctttc 6360 catcatagga gataattcgg tccctgcccg ttgcaggggg tctagcccgc cttaagggct 6420 tgtgcgggtt ggcaccgctt agcgaggtgt gaagactggc gtaacgcacc aggagacccc 6480 ggacttgtgt ccgccccatg agcacatggg ctgcaaacat tttgttggtt gttgtataaa 6540 accaactatc tttattcgtt tcagaagaaa cgtcatatct tttagtttga aataaaccca 6600 cataaactgt cgctaatagg gtggcatacc gttgagttct ttaggacgcc ttcggttccg 6660 tgaaatcggt atacgtgtga agatagggca gctcttgcca gcaaaggagc caggttgttg 6720 gaacctattt gaatccaacc gcatttgtca gttttagata taactgtcca ggtctactgc 6780 ttccgagcct gttaaaatct taaagcgccc agcgtccagg aattcctggc atggggacaa 6840 tgtttaaaac aacattagta aaatgttttc gtctttgatt gtgtgactgt gatggacaca 6900 tcctctcatc tttcagagag tgtgccgctg attagtacct gtgatgtgtg tagttttgaa 6960 actaccagag tcctcagtgg agaagcgccc tcccaaacga tattggccca aggttcccag 7020 aacttaaaat tgatggtgta ctaaaaaatt ggggggtcga acctttcttt ggggggggtc 7080 cggggggggg gacccggggg gggttaaccc ccccctttgg gggggggggg ccccccaggg 7140 gggggcccag gggccttttg ggggattttt tagacaaaaa gcccccttta tgtggggggg 7200 tggggccggg gggtgaaatt tttttaaacc gggggtggcg gccccctttt tccaagttgg 7260 ggggggtttc cccggggggg ggggtttttt cacccacccc cctggggggg tttttttttt 7320 ttttcttttt ttggaaaccc cgggggccct aaacaaaaac cggggggacc cttcaaaaat 7380 ttaaaaaaaa atattttttt ttttttttgg gggtttgggt tttattttta tttttttttt 7440 ttttttcccc aa 7452 //