ID   FN669547; SV 1; linear; genomic RNA; STD; VRL; 1539 BP.
XX
AC   FN669547;
XX
DT   24-FEB-2010 (Rel. 103, Created)
DT   18-NOV-2010 (Rel. 106, Last updated, Version 2)
XX
DE   Cherry virus A partial gene for genome polyprotein, isolate JKSNM, genomic
DE   RNA
XX
KW   .
XX
OS   Cherry virus A
OC   Viruses; Riboviria; Tymovirales; Betaflexiviridae; Trivirinae;
OC   Capillovirus.
XX
RN   [1]
RP   1-1539
RA   Noorani M.S.;
RT   ;
RL   Submitted (21-FEB-2010) to the INSDC.
RL   Noorani M.S., Plant Virology, Institute of Himalayan Bioresource Technology
RL   (CSIR), P.O. Box 6 Palampur, Himachal Pradesh 176061, INDIA.
XX
RN   [2]
RX   DOI; 10.1007/s00705-010-0826-6.
RX   PUBMED; 20938696.
RA   Noorani M.S., Awasthi P., Singh R.M., Ram R., Sharma M.P., Singh S.R.,
RA   Ahmed N., Hallan V., Zaidi A.A.;
RT   "Complete nucleotide sequence of cherry virus A (CVA) infecting sweet
RT   cherry in India";
RL   Arch. Virol. 155(12):2079-2082(2010).
XX
DR   MD5; b60c800d30eec62d4253234c0133996d.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1539
FT                   /organism="Cherry virus A"
FT                   /host="Prunus avium variety Manigam"
FT                   /isolate="JKSNM"
FT                   /mol_type="genomic RNA"
FT                   /country="India:Jammu & Kashmir, Srinagar"
FT                   /isolation_source="leaf of Prunus avium"
FT                   /collected_by="Md.salik Noorani"
FT                   /collection_date="10-Sep-2009"
FT                   /identified_by="Md. Salik Noorani"
FT                   /db_xref="taxon:42882"
FT   CDS             <1..>1242
FT                   /codon_start=1
FT                   /product="genome polyprotein"
FT                   /db_xref="GOA:D3VN19"
FT                   /db_xref="InterPro:IPR008879"
FT                   /db_xref="UniProtKB/TrEMBL:D3VN19"
FT                   /protein_id="CBJ94535.1"
FT                   /translation="QCPHMIQTCIGLLESSLNSMQSMLLTIPTCSSSILESCTNLATKA
FT                   LQKRQLPQMLGRSFKHFLGLLDYQILNPFSRMKILSTLQLWLSSMLVLIRASGRVVSSK
FT                   VRHAQQEPEGIMPEVLVRVLNQSQDLLKKILNSKGEICLGQIHVGLKIFSSIQNKGFQL
FT                   IKNSSTNLISAILREGTQISHMALSIVEQNYNEIRRGLGNYIWKNMIDPRDLLHLTAKP
FT                   AVEASEGVAATPAIVLSENQRAVKNTIRNYYLRIMFGNLAVMGTSEQTDYPGEHLAIPR
FT                   PVIENQEALTAHLPAGMSLLTFATNVKAWGVVGAEGKFAGLTFRQLCEPFAEQAYNFFR
FT                   ENHGAVSFIYLKNPGAYFNCPAVVFDFNKGLPLTIIKIGKNANAISACNQRLFNREGKK
FT                   AVLAAQGEVNLSFDA"
XX
SQ   Sequence 1539 BP; 462 A; 298 C; 341 G; 438 T; 0 other;
     caatgtccac acatgatcca aacatgcata gggctgctag aatcaagttt gaattcgatg        60
     caatcaatgt tgttgacaat tcccacttgt tcttcatcga ttttggagtc atgtaccaac       120
     ttagcaacca aagcactgca gaaaagacaa ctgccgcaga tgttggggcg cagtttcaag       180
     cactttttgg gtcttctgga ctaccaaatc ctgaatcctt tctcgaggat gaagatattg       240
     tcaaccctcc aactgtggct ctcatcgatg ttagtgttga tcagagcttc cggaagggtg       300
     gtttcttcaa aggtccgcca cgctcaacaa gagccagaag gtatcatgcc agaagtatta       360
     gttagggttt tgaatcaatc ccaagatttg ctgaaaaaga ttctgaacag caaaggagaa       420
     atttgcttag gtcaaattca tgtagggctg aaaattttca gttcaatcca gaacaaaggt       480
     tttcagttga tcaagaattc atcaacaaat ttgataagtg caattctcag agaagggact       540
     caaatctcac acatggcttt gagcattgtg gagcagaatt acaacgaaat aagaaggggc       600
     cttggaaact acatctggaa gaatatgata gatccaaggg atctgttaca tctaactgcg       660
     aaaccagcag tggaggcatc agagggagtg gcagcaaccc cagccatagt attgtcagag       720
     aaccagagag ctgtaaaaaa caccatcagg aattattacc tgaggataat gtttgggaat       780
     cttgcagtaa tgggaacaag cgaacagaca gactacccag gggagcatct agcgattccg       840
     agaccagtga tagagaatca ggaggctctg actgcacatc tcccagcagg catgtcattg       900
     ttaacttttg ccacaaatgt gaaagcatgg ggtgtagttg gtgcagaagg taagtttgct       960
     ggattaacct ttagacagtt atgtgagcca ttcgctgaac aagcttataa ctttttcaga      1020
     gaaaatcatg gagctgtctc atttatttat ctaaagaatc caggagctta ttttaattgc      1080
     ccagctgtgg tttttgattt caataaaggg ttgcctttaa ctataatcaa aattggaaaa      1140
     aatgccaatg caatatccgc ctgtaaccaa aggttgttta acagagaagg gaagaaggct      1200
     gtcctcgctg cacagggcga agttaactta agttttgatg cttaagtttt gcttgttgct      1260
     tgaatcccag agcaattaaa agatgatggc ataggtcttg gattgtgatg ttaactctca      1320
     aatccatcac cggcaccaat caagggtgtg tacttggtca ctagagaaga agtgtaagtc      1380
     ttctccaacc ttaagagagg ttaatttctc ttccctggtt taagtactag gatttgcatc      1440
     atttgttcta aaggttcttt ggatgcatct tatttagaac ctttccgctt tcagtgctat      1500
     ctaactgcac cttgctttag gactttttat tctttttcc                             1539
//