ID FN669168; SV 1; linear; genomic RNA; STD; VRL; 2762 BP. XX AC FN669168; XX DT 16-MAY-2010 (Rel. 104, Created) DT 16-MAY-2010 (Rel. 104, Last updated, Version 1) XX DE Lilac leaf chlorosis virus segment RNA-2, host Syringa vulgaris, genomic DE RNA XX KW . XX OS Lilac leaf chlorosis virus OC Viruses; Riboviria; Bromoviridae; Ilarvirus. XX RN [1] RP 1-2762 RA Varga A.; RT ; RL Submitted (19-FEB-2010) to the INSDC. RL Varga A., Canadian Food Inspection Agency, Sidney Laboratory, Centre for RL Plant Health, 8801 East Saanich Road, Sidney,, British Columbia, V8L 1H3, RL CANADA. XX RN [2] RX DOI; 10.1007/s00705-010-0673-5 . RA James D., Varga A., Leippi L., Godkin S., Masters C.; RT "Sequence analysis of RNA 2 and RNA 3 of lilac leaf chlorosis virus: a RT putative new member of the genus Ilarvirus"; RL Arch. Virol. 0:0(2010). XX DR MD5; 92c61cb0e574404c22c3dfa506d557eb. DR EuropePMC; PMC5491605; 28713347. XX FH Key Location/Qualifiers FH FT source 1..2762 FT /organism="Lilac leaf chlorosis virus" FT /segment="RNA-2" FT /host="Syringa vulgaris" FT /mol_type="genomic RNA" FT /note="Viruses; ssRNA positive-strand viruses, no DNA FT stage; Bromoviridae; Ilarvirus; Lilac leaf chlorosis virus" FT /db_xref="taxon:722755" FT 5'UTR 1..326 FT CDS 139..2562 FT /transl_table=1 FT /product="RNA-dependent RNA polymerase" FT /db_xref="GOA:D6CHU1" FT /db_xref="InterPro:IPR001788" FT /db_xref="InterPro:IPR007094" FT /db_xref="UniProtKB/TrEMBL:D6CHU1" FT /protein_id="CBJ94500.1" FT /translation="MEFVSLLSDTSFFSSNADVSDFQRDFIEMQRLNREAEELRDSKKK FT VTDLVTGLALAVFFRPHFERIFNQFLDTEFAPFVEDRWRQLFDLEERDWQYLFEVEERV FT TFADIYANDSYYGYNDEDFVVEIDSSVLEPYTPVDEVELESEPTGGVTEDFVNEGSLTE FT RPESFESPSTSDEVVEEVKPPMSMVVVSQTATNWADDEVSEDFDMHKYDDVRPCIGNKM FT LKLVERPNTMVPEVLPFETNQLLLVKEIRVDPFAGLLEHHEHVLARNDWTSLAMYLPMM FT EVPHCGELVTLPVRHMPMELIQSAVDELLPGVADLDDSFFQELVETSGVALELDRVSID FT TSVFRDWTKPSKNLQSKLNTGAISKRVPTFREAALAVKKRNLNVPNLQQVLLEDEEARK FT IANRFINTVLDPNKLAQFPGYISEGEKGYFEQYLIGKKIPENAFVDPCALVSMDKYRHM FT IKTQLKPVEDTSCLFERPLAATITYHDKGKVMSTSPIFLMMANRLLLCLNDKITIPSGK FT YHQLFSIDPFAFEMTKEFKEIDFSKFDKSQQRLHHLIQFHIFTALGAPREFLQMWFGSH FT EVSHIRDGICGLGFSVDYQRRTGDACTYLGNTIITLSALAYLYDLLDPNITFVVASGDD FT SLIGSLKPLDRTNEFQFTTLFNFEAKFPHNMPFVCSKFLCLVPTLDGGKKVVAVPNALK FT LFIKLGVKDMKPEIFDAWYESWLDLLWYFDNYFIVSTMRDYISHRYLRKHTYFVEGGML FT AFRTIFSSKTRCLQSLFGISPKDLPTADVQKAVTKPKPKVERPKGKGRVTKNVR" FT 3'UTR 1925..2117 XX SQ Sequence 2762 BP; 787 A; 544 C; 626 G; 805 T; 0 other; cccaaaccac atattccatc acggatatgt gacacctcat gactcccaaa ccacatttgt 60 aaaactttct ttccaagctc tcagtgaagt gatttcacga tttcttgata tcgatttaga 120 tatctcattc cgattcagat ggaatttgtg tcccttctct cagataccag ctttttctct 180 tcgaatgcag atgttagcga ttttcaacgc gatttcatcg agatgcagag attgaataga 240 gaagcagaag aattgaggga ttcgaagaag aaagtcactg atttagtgac aggattagca 300 ctcgctgtgt ttttccgacc tcacttcgaa agaatcttta accaattctt ggatactgag 360 tttgcccctt tcgttgaaga taggtggcgt caactcttcg atttagaaga gagagactgg 420 cagtacctgt tcgaagttga agaacgggtg acattcgcag atatttatgc gaatgactct 480 tattatggtt ataatgatga ggacttcgtt gtcgagatag actcttcagt cctcgaacca 540 tatactccag tcgatgaagt cgagcttgag agtgaaccga caggaggtgt caccgaagac 600 ttcgtgaatg aagggtcgtt gactgagcgg cccgaatcat tcgaatcacc gagcacttct 660 gacgaggtag tcgaagaggt gaaaccaccg atgtccatgg tggtcgtttc acagactgca 720 acaaattggg cagatgatga agtttctgaa gacttcgata tgcataagta cgatgacgta 780 cgaccatgca tagggaacaa aatgttaaaa ttggtcgaac gaccgaacac gatggttcca 840 gaagttctcc cttttgagac gaatcaattg ttgcttgtca aggagattag agtagatcct 900 ttcgcaggac tcttagaaca ccatgagcat gttttggctc gtaacgattg gacgtcactt 960 gcgatgtatc ttccgatgat ggaagttcca cattgtggtg agttagttac tttgcctgtc 1020 aggcacatgc cgatggagtt gattcaaagt gcggttgatg aactcctacc aggcgtggcc 1080 gatctcgacg atagtttctt tcaagaatta gtcgagactt ctggtgtggc actcgagctt 1140 gatagagtgt ccatagacac tagtgttttc agagattgga cgaaaccctc taaaaatctt 1200 caatcgaaac tgaacactgg tgctatttcg aaaagagtac cgacatttcg cgaagctgct 1260 ctagcggtta agaaaagaaa cttgaacgtt ccgaatttac aacaggttct tcttgaagac 1320 gaagaagctc ggaagatcgc caataggttc attaacaccg ttcttgatcc gaataaattg 1380 gctcaattcc cagggtatat ttccgaaggg gaaaaaggtt attttgaaca gtacttgatt 1440 ggaaaaaaaa tacccgaaaa tgctttcgtc gatccttgtg ccttagtgtc gatggataag 1500 tacagacaca tgataaagac acaattgaaa ccagttgagg atacgtcttg tcttttcgaa 1560 cgaccattag ctgctactat aacttaccac gataaaggga aagttatgag cacatctccg 1620 attttcctga tgatggctaa ccgattatta ctttgtttga acgataaaat cacaattccg 1680 agtggtaaat accaccagtt gttttcgatc gatccttttg ctttcgaaat gacgaaggaa 1740 tttaaagaga ttgatttttc taagttcgat aagtcccagc aaaggttaca tcatcttatt 1800 cagttccaca ttttcacagc tttaggagct ccgagagaat ttttacaaat gtggtttggg 1860 agtcatgagg tgtcacatat ccgtgatgga atatgtggct tgggtttctc agttgattat 1920 caacgaagga caggagatgc ttgtacctat ttgggtaata ctattattac cctctctgca 1980 cttgcgtacc tgtacgattt gttagatccg aacatcacgt ttgtggtggc ttctggagac 2040 gacagtctca taggatcttt aaaaccctta gaccgaacca atgaattcca attcacaaca 2100 ttgtttaatt tcgaagcgaa atttcctcat aacatgccgt tcgtatgtag taaatttctt 2160 tgcttggttc cgacgctgga tggtggaaag aaagtagtcg cagtacctaa tgcattaaag 2220 cttttcatta agctgggtgt caaagacatg aaaccagaaa tctttgatgc atggtacgaa 2280 tcatggttag atctactttg gtatttcgat aactatttca tagtttcgac catgcgagat 2340 tacatttctc ataggtatct ccgaaaacat acatactttg tagaaggggg tatgttggct 2400 tttaggacga ttttttcatc gaagacgaga tgtcttcaat ccctttttgg gattagtccg 2460 aaggatttac cgactgccga tgtgcagaag gcagtaacca aaccgaaacc aaaggtcgag 2520 agaccgaaag gtaaaggtag ggttacgaag aacgtgcgtt gaaaacttgt gttttctagg 2580 accgatttga tcacggtccg ataccaccga ttaggtgatg taccctttcc ccgttaggga 2640 ggtgtgggta gtgtgacaaa ggaaatgcgt tcccatttcc gatgatcttg tctcgcaaca 2700 acacgaaagt gttgattcct atatccgaga aggatataga tgctccgtta ggaacggatc 2760 cc 2762 //