ID FN668378; SV 1; circular; genomic DNA; STD; VRL; 2780 BP. XX AC FN668378; XX DT 17-FEB-2010 (Rel. 103, Created) DT 17-FEB-2010 (Rel. 103, Last updated, Version 1) XX DE African cassava mosaic virus segment A, isolate DRC 6 XX KW complete viral segment, complete genome. XX OS African cassava mosaic virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2780 RA Winter S.; RT ; RL Submitted (13-FEB-2010) to the INSDC. RL Winter S., Plant Virus Department, DSMZ, Messeweg 11/12, 38104, GERMANY. XX RN [2] RA Naseem S., Winter S.; RT "African cassava mosaic virus (ACMV) and East African cassava mosaic virus RT (EACMV-UG) in single and mixed infected cassava (Manihot esculenta RT Crantz)"; RL Unpublished. XX DR MD5; 82e16dc3172fd1273fbeeaf6162a95aa. XX FH Key Location/Qualifiers FH FT source 1..2780 FT /organism="African cassava mosaic virus" FT /segment="A" FT /host="Manihot esculenta" FT /isolate="DRC 6" FT /mol_type="genomic DNA" FT /country="Democratic Republic of the Congo:Yangambi" FT /collected_by="Winter S" FT /collection_date="2003" FT /identified_by="Winter S" FT /db_xref="taxon:10817" FT CDS 135..476 FT /gene="AV2" FT /product="precoat protein" FT /db_xref="GOA:D3HUQ9" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:D3HUQ9" FT /protein_id="CBJ57258.1" FT /translation="MWDPLVNEFPDSVHGLRCMLAIKYLQALEDTYEPSTLGHDLVRDL FT VSVIRARKYVEATRRYHHFHSRLQGSTKTELRQPIQEPCYCPHCPRHKSKTGLEEQAHV FT QKAHDVQDV" FT CDS 295..1071 FT /gene="AV1" FT /product="coat protein" FT /db_xref="GOA:D3HUR0" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:D3HUR0" FT /protein_id="CBJ57259.1" FT /translation="MSKRPGDIIISTPGSKVRRRLNFDSPYRNRATAPTVHVTNRKRAW FT RNRPMYRKPMMYRMYRSPDIPRGCEGPCKVQSFEQRDDVKHLGICKVISDVTRGPGLTH FT RVGKRFCIKSIYILGKIWMDENIKKQNHTNNVIFYLLRDRRPYGNAPQDFGQIFNMFDN FT EPSTATIKNDLRDRFQVLRKFHATVVGGPSGMKEQALVKRFYRLNHHVTYNHQEAGKYD FT NHTENALLLYMACTHASNPVYATLKIRIYFYDSIGN" FT CDS complement(1068..1472) FT /gene="3" FT /product="REn" FT /db_xref="GOA:D3HUR1" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:D3HUR1" FT /protein_id="CBJ57260.1" FT /translation="MDLRTGELITAPQAMNGVYTWEINNPLYFTITRHHQRPFLLNQDI FT ITVQVRFNHNLRKELGIHKCFLNFKIWTTLQPQTGLFLRVFRYQVLIYLDNMGVISINH FT VIRAADHVLFNVIAKTIECQLTHEIKFNVY" FT CDS complement(1213..1620) FT /gene="2" FT /product="TraP" FT /db_xref="GOA:D3HUR2" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:D3HUR2" FT /protein_id="CBJ57261.1" FT /translation="MQSSSPSQNHSSQVPIKVSHRQFKKRAIRRRRVDLVCGCSYYLHI FT NCSNHGFTHRGTHHCSSSNEWRVYLGNKQSPVFHNHQAPPTTIPAEPGHNNSPGSIQSQ FT PAEGAGDSQMFSQLQDLDDLTASDWSFLKGL" FT CDS complement(1529..2605) FT /gene="1" FT /product="replication protein" FT /db_xref="GOA:D3HUR3" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:D3HUR3" FT /protein_id="CBJ57262.1" FT /translation="MRNPRFRIQAKNVFLTYPKCSIPKEHLLSFIQTLSLPSNPKFIKI FT CRELHQNGEPHLHALIQFEGKITITNNRLFDCVHPGCSTSFHPNIQGAKSSSDVKSYLD FT KDGDTVEWGQFQIDGRSARGGQQSANDAYAKALNSGSKSGALNVIREFVPKDFVLQFHN FT LSSNLDRIFQEPPAPYVSPFLCSSFDQVPVEIEEWVADNVRDSAARPWRPNSIVIEGDS FT RTGKTIWARSLGPHNYLCGHLDLSPKVFNNAAWYNVIDDVDPHYLKHFKEFMGSQRDWQ FT SNTKYGKPVQIKGGIPTIFLCNPGPTSSYKEFLDEEKQAALKAWALKNAIFITLTEPLF FT SGSDQSQSQTIQETSHPA" FT CDS complement(2161..2571) FT /gene="4" FT /product="transcriptional regulator AC4" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:D3HUR4" FT /protein_id="CBJ57263.1" FT /translation="MYFSHTQSVLYPKNTYYHSFKHSLSHQTLSSLKSVENYIRMGNLT FT CMPSSNSKVKSRLRTIVSSIVYTQAVAPVSTPTFKVPNQAQMSSPIWIRTETPSNGDNF FT KSMADLLEAVNNQRMMLTPKRLTAAVSRELLM" XX SQ Sequence 2780 BP; 756 A; 553 C; 685 G; 786 T; 0 other; accggttggc cccgccccct ttaaacgtgg tccccgcgca ctacgtatgt cggccaatca 60 tgggatagct gtaaaggtta gttagtagtg gtgggccact atatacttgc aggcgaagtt 120 gtagctagtg cgcaatgtgg gatccactgg tgaatgagtt tccagactcg gtgcatgggc 180 ttaggtgtat gcttgcaatt aaatatttgc aggccttaga ggatacatac gagcccagta 240 ccttgggcca cgatctggtt agggatctag tctcagttat cagggctcgt aagtatgtcg 300 aagcgaccag gagatatcat catttccact ccaggctcca aggttcgacg aagactgaac 360 ttcgacagcc catacaggaa ccgtgctact gcccccactg tccacgtcac aaatcgaaaa 420 cgggcctgga ggaacaggcc catgtacaga aagcccatga tgtacaggat gtatagaagc 480 ccagacatac cgaggggctg tgaaggccca tgtaaggtcc agtcgtttga gcagagggat 540 gatgtgaagc atcttggtat ctgtaaggtg attagtgatg ttacgcgtgg gcctggactg 600 acacacaggg tcggaaagag gttttgtatc aagtccattt acattcttgg taagatctgg 660 atggatgaaa atattaagaa gcagaatcac actaataatg tgatttttta cctgctaagg 720 gatagaaggc cttatggcaa tgcgccccaa gactttgggc agatatttaa catgtttgat 780 aatgagccca gtactgcaac aattaagaac gatttgaggg ataggtttca ggtgttgagg 840 aaatttcatg ccacagttgt tggtggtcca tctggcatga aggagcaggc gttggttaaa 900 aggttttaca ggctgaatca tcacgttaca tataatcatc aggaggcagg gaagtatgat 960 aatcacacgg agaatgcatt gcttctgtac atggcatgta ctcatgcctc caatcctgta 1020 tatgcgacgt tgaaaatacg tatatacttc tatgacagta ttggcaatta ataaacattg 1080 aattttattt catgagtcaa ctgacactca atagtttttg caattacatt gaataaaaca 1140 tgatcagcag ctctaattac atggttaatt gagataacac ccatattatc caagtatata 1200 agtacttggt atctaaagac ccttaagaaa agaccagtct gaggctgtaa ggtcgtccaa 1260 atcttgaagt tgagaaaaca tttgtgaatc cccagctcct tccgcaggtt gtgattgaat 1320 cgaacctgga ctgttattat gtcctggttc agcaggaatg gtcgttggtg gtgcctggtg 1380 attgtgaaat acaggggatt gtttatttcc caggtataca cgccattcat tgcttgagga 1440 gcagtgatga gttcccctgt gcgtaaatcc atgattggag cagttgatat ggaggtaata 1500 tgaacagcca cagacaagat cgactctcct acgccggatg gctcgtttct tgaattgtct 1560 gtgactgact ttgatcggaa cctgagaaga gtggttctgt gagggtgatg aagattgcat 1620 tctttaaggc ccaggccttt agcgctgctt gcttttcctc gtcgaggaac tctttatagg 1680 acgaggtagg tcctggattg cagaggaaga tagtgggaat tccaccttta atttgaacgg 1740 gtttcccgta tttcgtgttg gactgccagt ccctctggga ccccatgaac tccttaaagt 1800 gttttaggta gtggggatcg acgtcatcaa tgacgttgta ccatgcagca ttattgaaga 1860 cctttggact aaggtccagg tgtccacaca ggtaattatg tgggcctaaa gatctggccc 1920 atatcgtttt ccctgttctg ctatcacctt ctatgacaat actattaggt ctccatggcc 1980 gcgcagcgga atccctaaca ttatcagcga cccattcttc aatttcaaca ggaacttggt 2040 caaaggaaga acataggaag ggagaaacat aaggagctgg tggctcctgg aaaatcctat 2100 ctaaattact acttagatta tgaaactgaa gtacaaagtc ctttgggacg aattccctaa 2160 ttacattaag agctcccgac ttactgccgc tgttaagcgc tttggcgtaa gcatcattcg 2220 ctgattgttg accgcctcta gcagatcggc catcgatttg aaattgtccc cattcgacgg 2280 tgtctccgtc cttatccaga taggacttga catctgagct tgatttggca ccttgaatgt 2340 tggggtggaa actggtgcta cagcctgggt gtacacaatc gaagagacga ttgttcgtaa 2400 tcgtgatttt accttcgaat tggatgaggg catgcaagtg aggttcccca ttctgatgta 2460 gttctctaca gattttaatg aacttagggt ttgatgggag agagagtgtt tgaatgaatg 2520 atagtaggtg ttctttgggt atagaacact ttgggtatgt gagaaataca ttcttggctt 2580 gaattctaaa acgaggattt ctcattttga ccaggtcaat tggagacact caactagaga 2640 cactcttgag catctcctcc agttaattgg agacaatata taggtgtctc taaatggcat 2700 tctggtaata agttgaactt taatttgaat taaaagtctc aaaaggctca gaacgcccaa 2760 ggggccaacc gtataatatt 2780 //