ID   FN667582; SV 1; linear; genomic RNA; STD; VRL; 672 BP.
XX
AC   FN667582;
XX
DT   02-MAR-2010 (Rel. 104, Created)
DT   02-MAR-2010 (Rel. 104, Last updated, Version 1)
XX
DE   Citrus tristeza virus CP gene for coat protein, genomic RNA, isolate SYR-A2
XX
KW   .
XX
OS   Citrus tristeza virus
OC   Viruses; Riboviria; Closteroviridae; Closterovirus.
XX
RN   [1]
RP   1-672
RA   Abou Kubaa R.;
RT   ;
RL   Submitted (05-FEB-2010) to the INSDC.
RL   Abou Kubaa R., Integrated Pest Management, Mediterranean Agronomic Institue
RL   of Bari, Via Ceglie, 9, Valenzano, 70010, ITALY.
XX
RN   [2]
RA   Abou Kubaa R., Kumari S., Saponari M., Djeluah K., D'onghia A.M.;
RT   "Citrus tristeza virus in Syria, state of the art";
RL   Unpublished.
XX
DR   MD5; 3d0546c35a94414c45f7b13db049fd31.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..672
FT                   /organism="Citrus tristeza virus"
FT                   /host="Citrus sinensis"
FT                   /isolate="SYR-A2"
FT                   /mol_type="genomic RNA"
FT                   /country="Syria:Lattakia-Hannadi nursery"
FT                   /collected_by="Raied Abou Kubaa"
FT                   /collection_date="30-May-2008"
FT                   /identified_by="Raied Abou Kubaa"
FT                   /PCR_primers="fwd_name: T36CP-F, fwd_seq:
FT                   atggacgacgaaacaaagaaattg, rev_name: T36CP-R, rev_seq:
FT                   tcaacgtgtgttgaatttccca"
FT                   /db_xref="taxon:12162"
FT   CDS             1..672
FT                   /gene="CP"
FT                   /product="coat protein"
FT                   /db_xref="GOA:D3UW77"
FT                   /db_xref="InterPro:IPR002679"
FT                   /db_xref="UniProtKB/TrEMBL:D3UW77"
FT                   /protein_id="CBK19530.1"
FT                   /translation="MDDETKKLKNKNKETKEGDNVVAAESSFGSVNLHIDPTLIAMNDV
FT                   RRLGTQQNAALNRDLFLTLKEKYPNLSDKDKDFHLAMMLYRLAVKSSSLQSDDDTTGIT
FT                   YTREGVEVDLSDKLWTDIVFNSKGIGNRTNALRVWGRTNDALYLAFCRQNRNLSYGGRP
FT                   LDAGIPAGYHYLCADFLTGAGLTDLECAVYIQAKEQLLKKRGADEVVVTNVRQLGKFNT
FT                   R"
XX
SQ   Sequence 672 BP; 190 A; 123 C; 176 G; 183 T; 0 other;
     atggacgacg aaacaaagaa attgaagaac aaaaacaagg aaacgaaaga aggcgacaat        60
     gttgttgcag cggagtcttc tttcggttct gtaaacttac acatcgatcc gactctgata       120
     gcgatgaacg atgtgcgtcg gttgggtacc caacagaatg ccgctttgaa cagagatttg       180
     tttcttactt tgaaagagaa gtatcctaat ttgtctgata aagataagga ctttcactta       240
     gctatgatgt tgtatcgttt agcggttaag agttcatcat tgcaaagcga tgacgacact       300
     acgggtataa cgtacactcg ggagggcgtc gaagtggatt tgtctgacaa actttggact       360
     gacatcgtgt ttaattctaa gggtatcggt aaccgtacta acgcccttcg agtctggggt       420
     aggactaacg atgcccttta tttagccttt tgtagacaga atcgcaattt gagttatggc       480
     gggcgtccgc tagatgcagg gattccggcc gggtatcatt acctgtgtgc agatttcttg       540
     accggagctg gcttgactga tttagagtgt gctgtgtaca tacaagctaa agaacaattg       600
     ttgaagaagc gaggggctga tgaagtcgta gttaccaatg tcaggcagct tgggaaattc       660
     aacacacgtt ga                                                           672
//