ID   FN658730; SV 1; circular; genomic DNA; STD; VRL; 1378 BP.
XX
AC   FN658730;
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DT   08-FEB-2010 (Rel. 103, Created)
DT   23-FEB-2012 (Rel. 111, Last updated, Version 2)
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DE   Cotton leaf curl Burewala alphasatellite, complete sequence, clone
DE   9S1-RCA-aIII-F
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KW   .
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OS   Cotton leaf curl Burewala alphasatellite
OC   Viruses; Alphasatellitidae; Geminialphasatellitinae;
OC   unclassified Begomovirus-associated alphasatellites.
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RN   [1]
RP   1-1378
RA   Thompson J.R.;
RT   ;
RL   Submitted (10-DEC-2009) to the INSDC.
RL   Thompson J.R., International Centre for Genetic Engineering and
RL   Biotechnology (ICGEB), Via Piovega 23, Ca'Tron di Roncade, 31056 (TV),
RL   ITALY.
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RN   [2]
RA   Zaffalon V., Mukherjee S.K., Reddy V.S., Thompson J.R., Tepfer M.;
RT   "A survey of geminiviruses and associated satellite DNAs in the
RT   cotton-growing areas of northwestern India";
RL   Arch. Virol. 0:0(2011).
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DR   MD5; 4e69b7e6c3283f8553cd7147e7438496.
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FH   Key             Location/Qualifiers
FH
FT   source          1..1378
FT                   /organism="Cotton leaf curl Burewala alphasatellite"
FT                   /host="Gossypium hirsutum"
FT                   /mol_type="genomic DNA"
FT                   /country="India:Rajasthan"
FT                   /collection_date="Sep-2007"
FT                   /clone="9S1-RCA-aIII-F"
FT                   /db_xref="taxon:713091"
FT   CDS             70..1017
FT                   /gene="alpha rep"
FT                   /product="replication protein"
FT                   /db_xref="GOA:D3HTY8"
FT                   /db_xref="InterPro:IPR000605"
FT                   /db_xref="InterPro:IPR003365"
FT                   /db_xref="UniProtKB/TrEMBL:D3HTY8"
FT                   /protein_id="CBJ19312.1"
FT                   /translation="MPSAQSVFWCFTIFFTSASPPDLVPLFENTSVSYACWQEEESPTT
FT                   RRRHLQGYLQLKTKKSLSAVKSLFGDLNPHLEKQRARRTDEARDYCMKEETRVSGPFEF
FT                   GEYCPSGSHKRRQRESVIRSPVRMAEENPSVFRRVKAKIAEEEFQKTAHEIQISNLKSW
FT                   QLRLKTLLERAPDDRTIFWVYGPDGGEGKSTFARDLYRSGTWFYTRGGSADNVSYQYIG
FT                   QLGNNIVFDIPRDKKDYLQYSLIEMFKDRLIVSNKYEPLMAPLVNCIHVVVMSNFLPDF
FT                   EKISQDRVHVIPCRPCGVCLKHHNINDNCEDYID"
XX
SQ   Sequence 1378 BP; 416 A; 261 C; 309 G; 392 T; 0 other;
     acccagcctt gtctacctct ccttggctac ctcgtgcgaa tcacgtgagt tttcgctctc        60
     tcgcttaaga tgccttctgc tcagtctgtc ttttggtgct tcaccatttt cttcacgagt       120
     gcttctcccc ctgacctggt gcctctcttc gaaaacacca gtgtgtctta tgcctgctgg       180
     caggaagaag agtcgcccac gactcgacga cgccacctgc agggatatct gcagttgaag       240
     actaaaaaat ctctctctgc ggtaaagtct ttgtttgggg atctcaatcc ccatcttgag       300
     aaacaacgag ctcgtcggac ggacgaagct cgtgactatt gtatgaaaga ggaaactagg       360
     gtttccggtc ccttcgaatt tggggaatat tgccctagtg ggtctcacaa acgccggcaa       420
     agggaatcgg taattcgatc tccggtgaga atggccgagg aaaatccgtc cgtcttccgg       480
     cgagtaaagg caaagattgc agaggaagaa ttccagaaga ccgcgcatga gattcaaatt       540
     tcaaatttga aatcttggca attgcgccta aagacgctcc tggaacgtgc cccagatgac       600
     cgcactatct tctgggtata tgggccagat ggtggtgaag ggaaatcaac ctttgctcga       660
     gacctgtata gaagtgggac ctggttctat acacgtggtg ggtctgctga taatgttagt       720
     tatcagtaca taggtcaact aggaaataat attgtatttg atatccctcg tgataagaag       780
     gattatctac agtacagttt aatagagatg tttaaggata gattaatagt tagtaataag       840
     tacgagcctc ttatggcccc tttggttaat tgtattcatg ttgtagttat gtctaatttt       900
     ctcccagact ttgagaagat tagtcaggat agagtccatg taatcccttg tagaccatgt       960
     ggtgtttgtc ttaaacacca taatattaat gataattgcg aggattatat tgactaaata      1020
     attttgtttc ttgaaaacaa gaaagaatgt aatgaaaaat gaaaaaataa aaaacatgag      1080
     ccttctacta ttttatttac ggaataagtg ccgcgcagcg gcattaaaaa aaataaaaat      1140
     aaaaaagaag tataaaaata tatttattat gtttttctaa aacgacgacg tattggaaaa      1200
     gtgtaaatgg gaccaaaatg taaatatatg aaacttcgtg cttgcggagc aaaaacttag      1260
     aaatataagg ttagcggagt aaatatatga aagttgaatg gcaccgctgt aattactgag      1320
     cttggctacc aggtatccaa ggatataaat aacacgtcga caaggctggt gtagtatt        1378
//