ID   FN658729; SV 1; circular; genomic DNA; STD; VRL; 1369 BP.
XX
AC   FN658729;
XX
DT   08-FEB-2010 (Rel. 103, Created)
DT   23-FEB-2012 (Rel. 111, Last updated, Version 2)
XX
DE   Cotton leaf curl Burewala alphasatellite, complete sequence, clone
DE   9S1-RCA-aII-F
XX
KW   .
XX
OS   Cotton leaf curl Burewala alphasatellite
OC   Viruses; Alphasatellitidae; Geminialphasatellitinae;
OC   unclassified Begomovirus-associated alphasatellites.
XX
RN   [1]
RP   1-1369
RA   Thompson J.R.;
RT   ;
RL   Submitted (10-DEC-2009) to the INSDC.
RL   Thompson J.R., International Centre for Genetic Engineering and
RL   Biotechnology (ICGEB), Via Piovega 23, Ca'Tron di Roncade, 31056 (TV),
RL   ITALY.
XX
RN   [2]
RA   Zaffalon V., Mukherjee S.K., Reddy V.S., Thompson J.R., Tepfer M.;
RT   "A survey of geminiviruses and associated satellite DNAs in the
RT   cotton-growing areas of northwestern India";
RL   Arch. Virol. 0:0(2011).
XX
DR   MD5; 375e8d80f94949085997156a7dbb98ff.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1369
FT                   /organism="Cotton leaf curl Burewala alphasatellite"
FT                   /host="Gossypium hirsutum"
FT                   /mol_type="genomic DNA"
FT                   /country="India:Rajasthan"
FT                   /collection_date="Sep-2007"
FT                   /clone="9S1-RCA-aII-F"
FT                   /db_xref="taxon:713091"
FT   CDS             70..1017
FT                   /gene="alpha rep"
FT                   /product="replication protein"
FT                   /db_xref="GOA:D3HTY7"
FT                   /db_xref="InterPro:IPR000605"
FT                   /db_xref="InterPro:IPR003365"
FT                   /db_xref="UniProtKB/TrEMBL:D3HTY7"
FT                   /protein_id="CBJ19311.1"
FT                   /translation="MPSAQSVFWCFTIFFTSASPPDLVPLFENTSVSYACWQEEESPTT
FT                   RRRHLQGYLQLKTKKSLSAVKSLFGDLNPHLEKQRARRTDEARDYCMKEETRVSGPFEF
FT                   GDYCPSGSHKRRQRESVIRSPVRMAEENPSVFRRVKAKIAEEEFQKTAHEIQISNLKSW
FT                   QSRLQTLLERAPDDRTIFWVYGPDGGEGKSTFARDLYRSGTWFYTRGGSADNVSYQYIG
FT                   QLGNNIVFDIPRDKKDYLQYSLIEMFKDRLIVSNKYEPLMAPLINCIHVVVMSNFLPDF
FT                   EKISQDRVHVIPCIPCGVCLKHHNINDKCEDYVD"
XX
SQ   Sequence 1369 BP; 414 A; 261 C; 306 G; 388 T; 0 other;
     acccagcctt gtctacctct ccttggctac ctcgtgcgaa tcacgtgagt tttcgctctc        60
     tcgtttaaga tgccttctgc tcagtctgtc ttttggtgct tcactatttt cttcacgagt       120
     gcgtcccccc ccgacctggt gcctctcttc gaaaacacca gtgtgtctta tgcctgctgg       180
     caggaagagg agtctcccac gactcgacga cgccacctgc agggatatct gcagttgaag       240
     actaagaaat ctctttctgc ggtgaagtcc ttgttcgggg atctcaatcc ccatcttgag       300
     aaacaacgag ctcgtcggac ggacgaagct cgtgactatt gtatgaaaga ggaaactagg       360
     gtttccggtc ccttcgaatt tggggattat tgccctagtg gatctcacaa acgccgccaa       420
     cgagaatctg taattcgaag tccggtgaga atggcagagg aaaatccgtc cgtcttccgt       480
     cgagtaaagg caaagattgc agaggaagaa ttccagaaga ccgcgcatga gattcaaatt       540
     tcaaatttga aatcttggca atcgcgccta cagacgctct tggaacgggc cccagatgac       600
     cgcactatct tctgggtata tgggccagat ggtggtgaag ggaaatcaac ctttgctcga       660
     gacctgtata gaagtgggac ctggttctat acacgtggtg ggtctgctga taatgttagt       720
     tatcagtaca taggtcaatt aggaaataat attgtatttg atattcctcg tgataagaag       780
     gattatctac aatatagttt aatagagatg tttaaagata ggttaatagt tagtaataag       840
     tacgagcctc ttatggctcc tttaattaat tgtatccatg tagtagtgat gtctaatttt       900
     ctcccagact tcgagaagat tagtcaggat agagtccatg taatcccatg tataccatgt       960
     ggtgtttgtc ttaaacatca caatattaat gataaatgtg aagattatgt ggattaatta      1020
     cttttgtttc ttgaagacaa gaaagaatga aatgaaaaaa aaaataaaaa catgagcctt      1080
     ctactatatt tacggaataa gtgccgcgca gcggcattaa aaaaaataaa aataaaaaag      1140
     aagtataaaa tatatttatt atgtctttct aaaacgacga cgtattggaa aagtgaaaat      1200
     gggactaaaa tgtaaatata taaaacttcg tgcttgcgga gcaaaaactt cgaaatataa      1260
     ggttagcgga gtaaatatat gatagttgaa tggcaccgct gtaatttcga gcttggctac      1320
     caggtatcca aggatataaa taacacgtcg acaaggctgg tgtagtatt                  1369
//