ID   FN658727; SV 1; circular; genomic DNA; STD; VRL; 1366 BP.
XX
AC   FN658727;
XX
DT   08-FEB-2010 (Rel. 103, Created)
DT   23-FEB-2012 (Rel. 111, Last updated, Version 2)
XX
DE   Cotton leaf curl Burewala alphasatellite, complete sequence, clone
DE   LG-RCA-aI-F
XX
KW   .
XX
OS   Cotton leaf curl Burewala alphasatellite
OC   Viruses; Alphasatellitidae; Geminialphasatellitinae;
OC   unclassified Begomovirus-associated alphasatellites.
XX
RN   [1]
RP   1-1366
RA   Thompson J.R.;
RT   ;
RL   Submitted (10-DEC-2009) to the INSDC.
RL   Thompson J.R., International Centre for Genetic Engineering and
RL   Biotechnology (ICGEB), Via Piovega 23, Ca'Tron di Roncade, 31056 (TV),
RL   ITALY.
XX
RN   [2]
RA   Zaffalon V., Mukherjee S.K., Reddy V.S., Thompson J.R., Tepfer M.;
RT   "A survey of geminiviruses and associated satellite DNAs in the
RT   cotton-growing areas of northwestern India";
RL   Arch. Virol. 0:0(2011).
XX
DR   MD5; 890c17d3a9273b2f3411aafb7bb9f794.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1366
FT                   /organism="Cotton leaf curl Burewala alphasatellite"
FT                   /host="Gossypium hirsutum"
FT                   /mol_type="genomic DNA"
FT                   /country="India:Punjab"
FT                   /collection_date="Sep-2007"
FT                   /clone="LG-RCA-aI-F"
FT                   /db_xref="taxon:713091"
FT   CDS             77..1024
FT                   /gene="alpha rep"
FT                   /product="replication protein"
FT                   /db_xref="GOA:D3HTY5"
FT                   /db_xref="InterPro:IPR000605"
FT                   /db_xref="InterPro:IPR003365"
FT                   /db_xref="UniProtKB/TrEMBL:D3HTY5"
FT                   /protein_id="CBJ19309.1"
FT                   /translation="MPTIQSQWWCFTVFFLSATAPDLVPLFENTHVSYACWQEEESPTT
FT                   RRRHLQGYLQLKGKRSFSQVKALFGDLNPHLEKQRARKTDEARDYCMKEETRVSGPFEF
FT                   GDYCPAGSHKRRQRESVIRSPVRMAEENPSVFRRVKAKIAEEEFQKTAKEIQISNLKSW
FT                   QSRLKTLLERDPDDRTIFWVYGPDGGEGKSTFARDLYRSGSWFYTRGGSADNVSYQYIG
FT                   CLGNNIVFDIPRDKKDYLQYSLIEMFKDRLIVSNKYEPLMAPLINSIHVVVMSNFLPDF
FT                   EKISVDRVHVIPCIPCGVCLKHHVGEIKCEEYLE"
XX
SQ   Sequence 1366 BP; 400 A; 259 C; 319 G; 388 T; 0 other;
     acccagcctc ggttccctct ccttggttcc ctcgtgcttt tcacgtgctc tctctcttct        60
     gtgttcttaa gcgaagatgc ctactattca gtcacaatgg tggtgtttta ctgtcttttt       120
     cctttctgcg accgctcccg accttgttcc tctcttcgag aacacccacg ttagttacgc       180
     ctgctggcag gaagaagagt cgccgacgac tcgacgacgc cacttgcagg gctacctgca       240
     attgaagggg aaaagaagct tttcgcaggt taaggcactg ttcggagacc tgaaccccca       300
     cctggagaaa caacgtgcgc gtaagaccga cgaagctcgg gattactgta tgaaagagga       360
     aactagggtt tccggtcctt ttgaatttgg ggattactgt cctgctggtt ctcacaaacg       420
     acgacaacgg gaatctgtaa ttcgaagtcc ggtgagaatg gctgaggaga atccgtccgt       480
     cttccgacga gtcaaggcaa agattgctga ggaagaattc cagaagaccg ccaaggagat       540
     tcaaatttca aatttgaaat cttggcaatc gcgcctgaag acgctcctcg aacgggaccc       600
     agatgaccgc actatcttct gggtttacgg acctgatggt ggggaaggaa aatccacctt       660
     tgccagagac ctgtacagaa gtgggtcctg gttctataca cgtggtggct ctgcagataa       720
     tgttagctac cagtacatag gatgtttagg gaataatatt gtatttgata ttcctcgtga       780
     taagaaggat tatctacagt acagtttaat agagatgttt aaggatagat taatagttag       840
     taataagtat gagcctctga tggctccctt aattaatagt atccatgtag ttgtgatgtc       900
     taattttctc ccagactttg agaagattag cgtagataga gtccatgtaa tcccatgtat       960
     tccttgtggt gtttgtctta agcatcatgt tggtgaaata aaatgtgagg aatatttgga      1020
     ataatctgaa atgtttgccg tataatagat tatattaaag agagaagggc cgcgcagcgg      1080
     caataacatg agtaattttg cttcttgaaa acaagaagga atgaaatgaa aataagaaat      1140
     aaaaaaaatt gtaatataaa tgtgggtccc acatttatat tgaaataaaa ataaatataa      1200
     aaataactaa ataaatatca ctattcattt tgcggaagga cttaattgta aataatgaaa      1260
     gttttgggta acgcggtgta attttaaaag actttaggat gtgcgcttgc aatttgccgg      1320
     ggatcctagg atataaataa cacgtcaccg aggctggtgt agtatt                     1366
//