ID   FN658710; SV 1; linear; genomic DNA; STD; VRL; 1214 BP.
XX
AC   FN658710;
XX
DT   08-FEB-2010 (Rel. 103, Created)
DT   23-FEB-2012 (Rel. 111, Last updated, Version 2)
XX
DE   Croton yellow vein mosaic alphasatellite partial alpha rep gene for
DE   replication protein, clone 9c-RCA-aI-p
XX
KW   .
XX
OS   Croton yellow vein mosaic alphasatellite
OC   Viruses; Alphasatellitidae; Geminialphasatellitinae; Clecrusatellite.
XX
RN   [1]
RP   1-1214
RA   Thompson J.R.;
RT   ;
RL   Submitted (10-DEC-2009) to the INSDC.
RL   Thompson J.R., International Centre for Genetic Engineering and
RL   Biotechnology (ICGEB), Via Piovega 23, Ca'Tron di Roncade, 31056 (TV),
RL   ITALY.
XX
RN   [2]
RA   Zaffalon V., Mukherjee S.K., Reddy V.S., Thompson J.R., Tepfer M.;
RT   "A survey of geminiviruses and associated satellite DNAs in the
RT   cotton-growing areas of northwestern India";
RL   Arch. Virol. 0:0(2011).
XX
DR   MD5; 698590079f13348d52e67c4fe80edc4e.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1214
FT                   /organism="Croton yellow vein mosaic alphasatellite"
FT                   /host="Acalypha sp."
FT                   /mol_type="genomic DNA"
FT                   /country="India:Haryana"
FT                   /collection_date="Sep-2007"
FT                   /clone="9c-RCA-aI-p"
FT                   /db_xref="taxon:713089"
FT   CDS             <79..>1026
FT                   /codon_start=3
FT                   /gene="alpha rep"
FT                   /product="replication protein"
FT                   /db_xref="GOA:D3HTX9"
FT                   /db_xref="InterPro:IPR000605"
FT                   /db_xref="InterPro:IPR003365"
FT                   /db_xref="UniProtKB/TrEMBL:D3HTX9"
FT                   /protein_id="CBJ19303.1"
FT                   /translation="YACSLSSVSLKEKMPTIQSQWWCFTVFYLSATAPDLVPLFENTHV
FT                   SYACWQEEESPTTGRRHLQGYLQLKGKRSFAQVKALFGDLNPHLEKQRARKTDEARDYC
FT                   MKEETRVSGPFEFGDYCPSGSHRRRQRESVIRSPVRMAEENPSVFRRVKAKIAEEDFQK
FT                   TAKEIQISNLKSWQLRLKTLLDRDPDDRTIIWVYGPTGGEGKSTFARDLYRSGSWFYTR
FT                   GGSADNVSYQYIGCLGHNIVFDIPRDKKDYLQYSLIEMFKDRLIVSNKYEPLMAPLINC
FT                   IHVVVMSNFLPDFEKISMDRVHVIPCIPCGVCLK"
XX
SQ   Sequence 1214 BP; 324 A; 237 C; 286 G; 367 T; 0 other;
     ctaggatata aataacacgt caccgaggct ggtgtagtat tacccagcct cggttccctc        60
     tccttggttc cctcgtgcga tacgcgtgct ctctctcttc tgtgtcctta aaagaaaaaa       120
     tgcctactat ccagtctcaa tggtggtgtt tcactgtttt ctatctttct gcgactgccc       180
     ctgaccttgt gcccttgttc gagaatactc acgtgagtta cgcctgctgg caggaagagg       240
     agtctcccac gactggacgt cgccatttgc aggggtatct ccaattgaag gggaaaagaa       300
     gttttgctca ggtgaaggct ctctttggtg acctgaaccc tcatttggag aaacagcgag       360
     cccgtaagac cgatgaggct cgcgattact gtatgaagga agaaactagg gtttccggtc       420
     cctttgaatt tggggattat tgtcctagtg gttcccatag acgccggcaa cgtgaaagtg       480
     tgattcgaag tccggtgaga atggccgagg agaatccctc tgttttccga cgagtcaagg       540
     caaagattgc agaggaagat ttccaaaaga ccgctaagga gattcaaatt tcaaatttga       600
     aatcttggca actgcgcctg aagacgctcc tcgacaggga cccagatgac cgcactatca       660
     tctgggttta tggtcccact ggtggagaag gaaaatccac cttcgctcga gacctgtaca       720
     gaagtgggtc ctggttctat acacgtggtg gttctgcaga taatgttagc taccagtaca       780
     tagggtgttt aggacataat attgtatttg atatccctcg tgataagaag gattatttac       840
     aatatagttt aatagaaatg tttaaggata gattaatagt tagtaataag tatgagcctc       900
     ttatggcccc attaattaat tgtattcatg tagtagttat gtctaatttt ctccctgatt       960
     ttgagaagat tagtatggat agggtccatg taatcccttg tatcccctgt ggtgtttgtt      1020
     taaagcatca tgttggtgaa ataaaatgtg aggaatacat tgattaatta tgttttgctt      1080
     tttaatacat ttattatatt tatctcggcc cgcagggcaa ctaattaata attttgcttc      1140
     ttgaaaacaa gaaggaatga tatgaaagaa gaaataaatt gttgtgtctt atgtgggacc      1200
     taccagtggg atcc                                                        1214
//