ID   FN645935; SV 1; linear; genomic DNA; STD; VRL; 1583 BP.
XX
AC   FN645935;
XX
DT   08-FEB-2010 (Rel. 103, Created)
DT   23-FEB-2012 (Rel. 111, Last updated, Version 2)
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DE   Cotton leaf curl Burewala virus AC1 gene for truncated replication
DE   initiator protein, clone LG-RCA-AII-p
XX
KW   .
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OS   Cotton leaf curl Burewala virus
OC   Viruses; Geminiviridae; Begomovirus; unclassified Begomovirus.
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RN   [1]
RP   1-1583
RA   Thompson J.R.;
RT   ;
RL   Submitted (07-DEC-2009) to the INSDC.
RL   Thompson J.R., International Centre for Genetic Engineering and
RL   Biotechnology (ICGEB), Via Piovega 23, Ca'Tron di Roncade, 31056 (TV),
RL   ITALY.
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RN   [2]
RA   Zaffalon V., Mukherjee S.K., Reddy V.S., Thompson J.R., Tepfer M.;
RT   "A survey of geminiviruses and associated satellite DNAs in the
RT   cotton-growing areas of northwestern India";
RL   Arch. Virol. 0:0(2011).
XX
DR   MD5; 93abdcd3920e96ea9763ca7ec69f2224.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1583
FT                   /organism="Cotton leaf curl Burewala virus"
FT                   /segment="A"
FT                   /host="Gossypium hirsutum"
FT                   /mol_type="genomic DNA"
FT                   /country="India:Punjab"
FT                   /collection_date="Sep-2007"
FT                   /clone="LG-RCA-AII-p"
FT                   /db_xref="taxon:620894"
FT   CDS             complement(693..1283)
FT                   /gene="AC1"
FT                   /gene_synonym="rep"
FT                   /product="truncated replication initiator protein"
FT                   /db_xref="GOA:D3HIS3"
FT                   /db_xref="InterPro:IPR001191"
FT                   /db_xref="InterPro:IPR001301"
FT                   /db_xref="InterPro:IPR022690"
FT                   /db_xref="InterPro:IPR022692"
FT                   /db_xref="UniProtKB/TrEMBL:D3HIS3"
FT                   /protein_id="CBJ17735.1"
FT                   /translation="MAPPKRFKVQAKNYFITYPQCSLTKEEALSQIQAINTPSNKKYIK
FT                   LCRELHEDGSPHLHVLIQFEGKFVCTNNRFFDLVSPTRSAHFHPNIQGAKSSSDVKAYI
FT                   DKDGDTLEWGEFQIDGRSARGGQQTANDAYAAALNAGSKSEALRVIKELAPKDFVLQFH
FT                   NLNANLDRIFQEPPAPYISPFSPFFFRSSSRRT"
XX
SQ   Sequence 1583 BP; 369 A; 332 C; 381 G; 501 T; 0 other;
     atcctgatcg tgagtatatc catattcgtc gtgaatggac ggttgacgtg gctgatgatc        60
     ttgaaataga ggggatttgg aacttcccag atatatgcgc cattccctgc ttgagctgca       120
     gtgatgggtt cccctgtgcg tgaatccatg gttgtggcag ttgattgaca gatactaata       180
     acaccctcat tcaagatcta ttctcttcct cctgttgcgt ctcttcgctt ccctgtgctg       240
     tactttgatt ggaagctgag tacagtggtc cttcgagagt gatgaagatt gcatttttta       300
     aggcccaatt ctttaatgct gtgttttttt cctcgttgag gaattcatta taactgctgt       360
     tcggaccagg attgcacagg aagattgtcg gtatcccgcc tttaatttga actggctttc       420
     cgtattttgt gttggactgc cagtctcttt gggcccccat gaactcttta aagtgtttga       480
     ggaaatgcgg gtcgacgtca tcaatgacgt tgtaccaggc gtcgttactg tatactttgg       540
     gactcaggtc cagatgtccg cacaaatagt tatgtggtcc caatgatcta gcccacatcg       600
     tcttccccgt tcgactatct ccctcaatta ctatactccg aggtctaagg ggccgcgcag       660
     cggcatcgac aacgttatcg atggcccaaa cttcaagttc ttctggaact tgatcgaaag       720
     aagaaaggag aaaaaggaga aatataggga gccggtggct cctgaaagat tctatctaga       780
     tttgcattta aattatgaaa ttgtagtaca aaatctttag gagctagttc cttaatgact       840
     ctaagagcct ctgacttact gcctgcgtta agtgctgcgg cgtaagcgtc gttggctgtc       900
     tgctgtcctc ctcttgctga tcttccatct atctgaaact ctccccactc gagagtgtcc       960
     ccgtccttgt cgatgtaggc cttgacatct gagcttgatt tagctccctg aatgttcgga      1020
     tggaaatgtg ctgacctggt tggggatacc aggtcgaaga atctgttatt cgtgcagacg      1080
     aatttgccct cgaactggat gagcacatgg agatgagggc tcccatcttc gtgtaactct      1140
     ctgcagagtt tgatgtattt tttattcgag ggtgtgttga tggcttgaat ttgggaaagt      1200
     gcttcctctt tagtgagtga gcactgtgga taagtgatga aatagttttt ggcttgtact      1260
     ttaaaacgtt tggggggagc cattgacttt ggtcaattag agacaactga tgggctttta      1320
     ctctgggaat tggagactgg atacaattta tagtgtctcc aaatggcata ttctgtaaat      1380
     aactagaagt tcgtttgaaa ttcaaattcc cctttggggt ccaaaagcgg ccatccgtat      1440
     aatattaccg gatggccgcg cgattttttt gtgggcccta ccattaactc ttgtcggcca      1500
     atcatatgac gcgctcaaag cttaaaaaat tctcccgcgt attataagta cttcgttgct      1560
     aagtatgcgt ttgaaaaatg tgg                                              1583
//