ID   FN600344; SV 1; linear; genomic RNA; STD; VRL; 1630 BP.
XX
AC   FN600344;
XX
DT   09-MAY-2010 (Rel. 104, Created)
DT   07-APR-2017 (Rel. 132, Last updated, Version 2)
XX
DE   Pepper yellows virus ORF2 (partial), ORF3 (partial) and ORF4, genomic RNA
XX
KW   .
XX
OS   Pepper yellows virus
OC   Viruses; Riboviria; Luteoviridae; Polerovirus.
XX
RN   [1]
RP   1-1630
RA   Lotos L.;
RT   ;
RL   Submitted (04-DEC-2009) to the INSDC.
RL   Lotos L., Faculty of Agriculture, Aristotle University of Thessaloniki,
RL   Plant Pathology Lab, P.O. Box 269, Thessaloniki, 54 124, GREECE.
XX
RN   [2]
RA   Lotos L., Efthimiou K., Maliogka V.I., Katis N.I.;
RT   "Molecular characterization of Pepper yellows virus, a new member of the
RT   genus Polerovirus";
RL   Unpublished.
XX
DR   MD5; 934dc823da7378ae1244538b80a1eb14.
DR   EuropePMC; PMC3081434; 21400195.
DR   EuropePMC; PMC3728342; 23936244.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1630
FT                   /organism="Pepper yellows virus"
FT                   /host="Capsicum annuum"
FT                   /isolate="PY"
FT                   /mol_type="genomic RNA"
FT                   /country="Turkey:Antalya"
FT                   /db_xref="taxon:698400"
FT   CDS             <1..820
FT                   /codon_start=2
FT                   /transl_table=1
FT                   /product="putative RNA dependent RNA polymerase"
FT                   /note="ORF2"
FT                   /db_xref="GOA:D6CH26"
FT                   /db_xref="InterPro:IPR001795"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:D6CH26"
FT                   /protein_id="CBI69560.1"
FT                   /translation="LIMSVSLVDQLVARVLFQNQNKREIALWRANPSKPGFGLSTDEQV
FT                   LEFVQALAAQVEVPPEEVITSWEKYLVPTDCSGFDWSVAEWMLHDDMVVRNKLTLDLNP
FT                   TTEKLRSVWLKCICNSVLCLSDGTLLAQRVPGVQKSGSYNTSSSNSRIRVMAAYHCGAD
FT                   WAMAMGDDALESVNTNLEVYKDLGFKVEVSGQLEFCSHIFRAPDLALPVNERKMLYKLI
FT                   FGYNPGSGNLEVISNYIAACVSVLNELRHDPDSVALLHQWLVSPVLPQNN"
FT   misc_feature    821..1018
FT                   /note="intergenic non-coding region (NCR)"
FT   CDS             1019..>1630
FT                   /transl_table=1
FT                   /product="coat protein"
FT                   /note="ORF3"
FT                   /db_xref="GOA:D6CH27"
FT                   /db_xref="InterPro:IPR001517"
FT                   /db_xref="InterPro:IPR029053"
FT                   /db_xref="UniProtKB/TrEMBL:D6CH27"
FT                   /protein_id="CBI69561.1"
FT                   /translation="MNTGGVRSNNNGNGGSRSTRRRRRPRQVRPVVVVAPPGRTRRGNR
FT                   RRRNGGRNRRSRNRVGGRSSNSETFVFNKDSIKDSSSGAVTFGPSLSESIALSGGVLKA
FT                   YHEYKITMVNIRFVSESSSTAEGSIAYELDPHCKLTSLQSTLRKFPVTKGGQATFRASQ
FT                   INGVEWHDTSEDQFRLLYKGNGTKNVAAGFFQIRFTVQLPN"
FT   CDS             1050..1520
FT                   /transl_table=1
FT                   /product="putative movement protein"
FT                   /note="ORF4"
FT                   /db_xref="InterPro:IPR001964"
FT                   /db_xref="UniProtKB/TrEMBL:D6CH28"
FT                   /protein_id="CBI69562.1"
FT                   /translation="MEMVDHAAPAVADAHDRFALSLWSHPLGAHGGEIEDDEMEAGTEE
FT                   AEIELEDGRATARLSSSTRTQSRIVPQELSPSGRLYQRASRFQVEFSKPTMNIRSQWST
FT                   YASSVNPLPQRRAPSLTSWTPTASLLVSNPPCVSSPSPKAGKRLLGLRRLTG"
XX
SQ   Sequence 1630 BP; 431 A; 403 C; 408 G; 388 T; 0 other;
     ccttatcatg agtgtttccc tagtagatca attggtagcc cgggttctgt ttcaaaacca        60
     gaacaagcga gaaatcgctc tttggagggc aaatccctca aaacccggtt ttggcttgtc       120
     tacggatgag caagtgctgg agttcgtaca agctctggcc gcgcaagtgg aagttccacc       180
     agaggaagtg attacctcgt gggagaagta ccttgtgccg actgattgct ctggatttga       240
     ctggagcgtt gcggaatgga tgctacatga cgatatggtc gtccgcaaca aactcacact       300
     ggacttaaat ccgacaacgg aaaagctacg atctgtgtgg ctaaagtgca tctgcaatag       360
     tgtcctgtgt ttgagtgatg gcacactcct cgcccaaagg gtccccggcg ttcaaaagtc       420
     cggtagctac aacacaagta gctctaattc aaggatccga gttatggccg cctaccactg       480
     tggggctgac tgggctatgg cgatgggaga tgatgctctc gaatcagtca acactaacct       540
     agaggtgtat aaagatctag gttttaaagt cgaggtttca ggacaactgg aattctgctc       600
     tcacatcttt agagcgcctg accttgccct tcccgtgaat gagcgtaaaa tgctgtacaa       660
     gctcatcttc ggatataatc cgggaagtgg gaatctggag gttatctcca actatatcgc       720
     cgcttgtgta tcagttctaa acgaattgcg gcatgaccca gattccgttg ctctccttca       780
     ccagtggtta gtctctccag tgctgccaca aaataattga agagagagcg tataactagc       840
     caagcataca tcagttgcaa gcgttggaag ttcaagtctg attaccaaca gcctgacaca       900
     atagatttta aatttttagc aggatttgcg tttggatttt tatccgcaat cccaatttcg       960
     atagcaggca tatacctagt ctacctgaaa atctcagccc acgtacgcgc aatcgttaat      1020
     gaatacggga ggagttagga gtaacaataa tggaaatggt ggatcacgca gcacccgccg      1080
     tcgcagacgc ccacgacagg ttcgccctgt cgttgtggtc gcaccccctg ggcgcacacg      1140
     gcggggaaat cgaagacgac gaaatggagg caggaaccga agaagccgaa atagagttgg      1200
     aggacggtcg agcaacagcg agactttcgt cttcaacaag gactcaatca aggatagttc      1260
     ctcaggagct gtcaccttcg ggccgtctct atcagagagc atcgcgcttt caggtggagt      1320
     tctcaaagcc taccatgaat ataagatcac aatggtcaac atacgcttcg tcagtgaatc      1380
     ctcttccaca gcggagggct ccatcgctta cgagctggac ccccactgca agcttactag      1440
     tctccaatcc accctgcgta agttccccgt caccaaaggc gggcaagcga cttttagggc      1500
     ttcgcagatt aacggggtag agtggcatga tacatccgaa gatcaattta ggctgctcta      1560
     caaaggcaat ggaacaaaga acgttgccgc cggtttcttc cagatccggt tcactgtgca      1620
     actgcccaac                                                             1630
//