Dbfetch

Dbfetch

ID   FN568491; SV 1; linear; genomic RNA; STD; VRL; 860 BP.
XX
AC   FN568491;
XX
DT   18-NOV-2009 (Rel. 102, Created)
DT   22-SEP-2011 (Rel. 110, Last updated, Version 2)
XX
DE   Apple mosaic virus partial MP gene for Movement protein, isolate K-2,
DE   genomic RNA
XX
KW   .
XX
OS   Apple mosaic virus
OC   Viruses; Riboviria; Bromoviridae; Ilarvirus.
XX
RN   [1]
RP   1-860
RA   Lakshmi V.;
RT   ;
RL   Submitted (14-NOV-2009) to the INSDC.
RL   Lakshmi V., Plant Virology, Institute of Himalayan Bioresource Technology
RL   (CSIR), PO Box no-6, Himachal Pradesh-176061, INDIA.
XX
RN   [2]
RX   DOI; 10.1007/s13337-011-0036-1.
RX   PUBMED; 23637501.
RA   Lakshmi V., Hallan V., Ram R., Ahmed N., Zaidi A.A., Varma A.;
RT   "Diversity of Apple mosaic virus Isolates in India Based on Coat Protein
RT   and Movement Protein Genes";
RL   Indian J Virol 22(1):44-49(2011).
XX
DR   MD5; cca6698aeee0625e1e50d229b6e432a3.
DR   EuropePMC; PMC3550718; 23637501.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..860
FT                   /organism="Apple mosaic virus"
FT                   /host="Malus x domestica"
FT                   /isolate="K-2"
FT                   /mol_type="genomic RNA"
FT                   /country="India:Kinnaur"
FT                   /isolation_source="host leaf"
FT                   /collected_by="Vijay Lakshmi"
FT                   /collection_date="17-Sep-2009"
FT                   /identified_by="Vijay Lakshmi"
FT                   /db_xref="taxon:12319"
FT   CDS             <1..860
FT                   /codon_start=3
FT                   /gene="MP"
FT                   /product="movement protein"
FT                   /db_xref="GOA:D1H0T9"
FT                   /db_xref="InterPro:IPR002538"
FT                   /db_xref="UniProtKB/TrEMBL:D1H0T9"
FT                   /protein_id="CBH41392.1"
FT                   /translation="ETLGDKPSSDFEVGECSMEQFQRVSNDLHELMLSAEMRNLPTKGC
FT                   HVLQLKNMSKTKSLKLESKEQRGFIAKMADGIKKKVYRDVGRIFIIYVPLIQKTTSGLM
FT                   TLKMIQSDTGERSDIITDFDASEAKVIMDRWGRSLVAEAQLELLYSIVCTDIRPEAVVG
FT                   ELMVFWDETMSQRMVYSERGNPIVFPIMETQPSRYLKDKNLLMSMIRGRIEVGAEGCDV
FT                   APTQLKVEPLGDKRQVLTIKPKEEPMKESKDIKIEEVSDGKHLKEQAKAVEMGDKPPIG
FT                   NISG"
XX
SQ   Sequence 860 BP; 292 A; 150 C; 222 G; 196 T; 0 other;
     atgaaacact gggagataaa ccctcctccg actttgaagt tggggagtgt tccatggaac        60
     agttccaacg agtgtctaac gatctgcatg agctgatgct atcagcagag atgcgaaact       120
     tacccacgaa aggatgtcac gtgcttcaac taaaaaacat gtcgaagacg aagtccttaa       180
     agctcgaatc caaagagcag agagggttca tcgcgaagat ggccgatggg attaagaaga       240
     aagtttaccg agacgttggt aggattttta tcatctatgt gccattgatt cagaaaacca       300
     cgagtggtct gatgacttta aagatgattc aatccgatac cggcgaaaga tccgatatca       360
     tcaccgattt tgatgctagt gaagcgaagg tgataatgga tcgatggggt cgatctttag       420
     ttgcagaggc acaattagaa ttgttatatt cgatagtctg cacagatata agacccgaag       480
     ccgtagttgg cgagttaatg gtattctggg atgaaaccat gagccaacga atggtgtatt       540
     ccgaaagagg gaatcccata gtttttccga taatggaaac tcaaccgagt agatatttga       600
     aagataaaaa tctactaatg agtatgattc gaggaagaat cgaggttggg gcggaaggat       660
     gcgatgtagc accgacgcaa ctgaaggtcg aacctttggg cgacaagcga caagtcttga       720
     cgataaagcc taaagaagaa ccgatgaagg agtcgaaaga tataaaaatc gaagaagtct       780
     ccgatggaaa gcatttaaaa gaacaagcga aagctgtaga aatgggtgat aaaccaccca       840
     ttggaaatat aagcggatga                                                   860
//