ID FN563992; SV 1; linear; genomic RNA; STD; VRL; 3571 BP. XX AC FN563992; XX DT 18-NOV-2010 (Rel. 106, Created) DT 18-NOV-2010 (Rel. 106, Last updated, Version 1) XX DE Southern rice black-streaked dwarf virus segment 4, isolate HN, complete DE segment, genomic RNA XX KW complete viral segment, complete genome. XX OS Southern rice black-streaked dwarf virus OC Viruses; Riboviria; Reoviridae; Spinareovirinae; Fijivirus. XX RN [1] RP 1-3571 RA Adams M.J.; RT ; RL Submitted (04-NOV-2009) to the INSDC. RL Adams M.J., Rothamsted Research, Department of Plant Pathology and RL Microbiology, Harpenden, Herts AL5 2JQ, UNITED KINGDOM. XX RN [2] RX AGRICOLA; IND44448932. RA Wang Q., Yang J., Zhou G.H., Zhang H.M., Chen J.P., Adams M.J.; RT "The Complete Genome Sequence of Two Isolates of Southern rice RT black-streaked dwarf virus, a New Member of the Genus Fijivirus"; RL J. Phytopathol. 158(11-1):733-737(2010). XX DR MD5; ea3b9d92403b688d4f0e0658000a4ee4. DR EuropePMC; PMC3610162; 23331990. XX FH Key Location/Qualifiers FH FT source 1..3571 FT /organism="Southern rice black-streaked dwarf virus" FT /segment="4" FT /isolate="HN" FT /mol_type="genomic RNA" FT /country="China:Hainan, Dongao city" FT /collection_date="2003" FT /db_xref="taxon:519497" FT CDS 15..3455 FT /product="P4" FT /note="ORF4" FT /db_xref="UniProtKB/TrEMBL:E4WKW7" FT /protein_id="CBH31254.1" FT /translation="MLKVNVQALIYPFSGQITDIRRNQLIPTAKFKHTVLHQPIFITKL FT KNKFSSNDAPPTRNTLRVNPVWSNAFFDWNSALLNPWTVLPSSTGSGSMSIPSHKNVES FT GNAILKNAEFINERLPAYLKLLFDSLNLKENGYVNQFGFWALLYLDYSLHCLVPTEYYR FT QMLNLRTKENIIFLDTYNEVEYAISYLSRFNKILYVKGQGRKFVKLPSFGKLGFTFDKD FT TILGGIGNDLQYWTLWPLHNDYTHADTNRPNHANIFRNLGQFNNELVGILHYPTFFDEL FT YLYFEPIPESVKPQIYTVVRTYHAQLKLQDNLGTNRLERRGYYLTAYSPFYELFIDAIA FT QEFGELYLYIQLFGAIPFNSGSPSSIPMTYSDFDSYYHRRFGHLKEFGKLTFENLTEKY FT NRSKLKPFQLFFVYDQMYQLMQTISPSLNLKPNLELIEIEEYGDGANLEDFDINDVSAC FT RLIDYPLGDALPLNTLEVFPPNLFEVSEHIRMMFESRFLSPYAMYSLPLVPGGHDVLIQ FT TDESRLSDFRKNTAQRKVFKALQKQVLNSKNIFKKFVEPNLIKSSLSSADFLFWVAYSV FT ASSPKFTVNVKGELDVPPITADVDKLVYTSPNTSSFKLLSLFFQFLHEKTFVQLNQPMS FT IVFLGAKSEPVADMLYRLSHENWSIQRYGNDAEWPGKKANVLSINLKNVYDVAISDMDQ FT SIGSSVANITANTLRQLRVCLESFSKRLIFKLQYCLFHTLSSVTAILREYGAEIAASGH FT FITLRIIRHAWSKVGSLEIFLIIDKVKTAESIPDDKELRKVVNTLGLSEPNQLFFTYMG FT TPRKYTLNDLNCKIFSVDITSEEMTNICSVFLNLSQCVSYGSSIYDKEHLNLTFFGTTN FT IQRIGLFMRNKQIYKALSITGSEHKPEGIFTPSLDFVIPGVREVVVLGDAHRMVGWKIL FT KALHFDKGVLDVSLTAYDIGCRDYECAYMTVIDDDTILNYVGYDRASVLDVKRGITVIK FT AEVNRDKLTELCGLGHVFAFNSYYMGFSTRDELEKELNYIADTLVIKGFFFISFYEMED FT DLKPVLKHHGFIDITSADVAAYKFTFGKYHAVATVSVDFVKKWKAKMMTKYDVYQIFLS FT ANDVSFSCIMHGYSVNLNSMYFAPVYNLFSPCFLIHPKK" XX SQ Sequence 3571 BP; 1112 A; 583 C; 641 G; 1235 T; 0 other; aagttttttt caggatgttg aaagtaaatg tgcaggccct catttatcct ttcagcggac 60 aaattacaga cattagaaga aaccaactca ttccaactgc taaattcaaa cacactgtct 120 tacatcagcc tatttttatt acaaaactta aaaataaatt ctcatccaat gacgcccctc 180 caactcgaaa cactctacga gttaatcctg tttggtcaaa tgcttttttt gattggaatt 240 cagctttatt aaatccttgg actgtccttc cctcctcgac tggctctggc tcaatgtcaa 300 ttccatcaca taaaaatgtt gaatcaggca acgcaatttt gaaaaatgct gaattcatta 360 acgaacgtct tccagcttac ttaaagctgt tgtttgatag tttgaatttg aaagaaaatg 420 gatatgttaa tcaatttggg ttttgggctt tattatacct agattacagt ttgcattgtc 480 tcgtaccaac tgaatattat cgccaaatgt taaatctacg aacaaaggag aacataatat 540 ttttagacac gtataatgaa gtagaatatg caatttcata tttatctcga ttcaacaaaa 600 ttttatatgt taaaggtcag ggtcgaaaat tcgttaaatt gccaagcttt ggaaaactag 660 gatttacttt tgataaagac accattctag gaggaattgg aaacgatctt caatattgga 720 cattatggcc tttacacaac gactatactc acgctgatac caacagacca aatcatgcga 780 acattttccg aaatttagga caattcaata atgagttagt tggaattctt cattatccga 840 ccttctttga tgaactttac ctttattttg aacccattcc agaatcagtt aaacctcaaa 900 tatataccgt tgttcgaaca taccatgctc aattaaaatt acaagacaat ctcggtacta 960 atcgtttaga aagaagaggc tactatttga ctgcttacag tccattttat gaattattca 1020 ttgacgcgat agctcaagag ttcggtgaat tatatctcta tatacaactg tttggtgcta 1080 ttccttttaa cagtggaagt cctagtagta ttcctatgac ttactcagat tttgattcct 1140 attatcatcg tagattcgga catttgaaag aatttggaaa acttactttt gaaaatttaa 1200 ctgaaaagta caatagatct aaactcaaac ctttccaact gttttttgtt tatgatcaga 1260 tgtatcaact gatgcaaaca atatctccta gtttaaattt gaaacctaat cttgagctta 1320 ttgagattga agagtatggt gacggtgcca atttagaaga tttcgatatt aatgatgtta 1380 gtgcatgccg gttgattgat tatcctttag gtgacgcatt acccttaaac actttagaag 1440 tattccctcc aaatttgttt gaagtttcag agcacattcg aatgatgttc gaaagccgtt 1500 ttctcagtcc ttatgcaatg tattctttgc ctttagttcc aggtggtcat gacgttttga 1560 ttcaaacaga tgagagtaga ttatccgatt ttcgtaaaaa cacagctcag aggaaagtat 1620 tcaaggcttt acaaaagcaa gttttaaatt ctaaaaacat ctttaagaaa tttgttgaac 1680 ctaatttaat aaaaagttcc ttgtcttcag ctgacttttt gttttgggtt gcttatagtg 1740 tagcatcttc accgaaattt acggtgaatg tcaaaggtga attagacgta cctccaatca 1800 cagcagacgt tgataaatta gtatacacat ctcctaatac ttcttctttc aaattattaa 1860 gcttattctt tcagtttttg cacgagaaaa cttttgttca gttaaatcaa cccatgagta 1920 tcgtctttct tggtgctaaa agtgaacccg ttgctgacat gttatatcgt ttatcgcatg 1980 agaattggag tattcaaagg tatggtaatg acgcggaatg gccaggtaaa aaagcaaatg 2040 ttctatctat taatttgaaa aatgtgtatg acgtcgccat ttctgatatg gatcaaagca 2100 taggatctag cgttgcaaat attactgcga atactctaag acaattgaga gtttgtttag 2160 aatcatttag taaaagattg atttttaagt tgcaatactg tctatttcat actttgagtt 2220 cagtcactgc tattcttcgt gaatatggtg ctgagatagc tgcatcaggt cattttatta 2280 cattgcgaat tattcgtcat gcttggtcga aagtgggaag tttggaaata tttttgatta 2340 tagacaaggt aaaaacagct gagtcaattc cggatgataa ggagttaagg aaagttgtga 2400 atactttagg attgagcgaa cctaatcaat tgttctttac atacatgggt acccctcgaa 2460 aatatacctt gaacgacttg aattgtaaaa tattcagcgt tgacataacc tctgaagaaa 2520 tgacaaatat ttgctctgta tttttaaatt tatctcaatg tgtcagttat ggttcttcca 2580 tttatgataa ggaacattta aatttaactt ttttcgggac gacaaatatt cagagaatcg 2640 gattgttcat gcgcaataaa caaatttaca aagctttgtc aattacaggt agcgaacaca 2700 agccagaagg aatttttaca ccctcattag attttgttat tcccggtgtt cgagaagttg 2760 ttgttttagg agatgctcat cgtatggttg gatggaaaat tctgaaggct ttgcattttg 2820 ataaaggtgt tcttgatgtt agtttaactg catatgatat tggttgtcgt gattatgagt 2880 gtgcttatat gactgttatc gatgatgata ctattcttaa ttatgtggga tacgatagag 2940 cttctgtgct ggatgttaaa cgtggaatta cagttattaa agctgaagtg aacagagaca 3000 agttaactga attgtgcggt ttaggacacg tcttcgcttt taattcttat tacatgggtt 3060 tttctactag agacgaattg gagaaagaat tgaattacat tgctgataca ctagtgataa 3120 aaggtttctt tttcataagt ttttacgaaa tggaggacga tttaaaacct gtattgaaac 3180 atcatgggtt tatagatata actagtgcgg atgtggctgc ctataaattc acttttggaa 3240 aatatcatgc cgtcgctact gtcagtgtgg attttgtaaa aaagtggaaa gcaaaaatga 3300 tgactaaata tgacgtttat caaatctttt tatcagctaa tgatgttagt ttcagttgta 3360 tcatgcatgg ttattctgtc aatttaaata gtatgtattt cgcgccggtt tataacttat 3420 tttctccttg tttcttaatt catcccaaaa aatgaatttt taatgtttgt gcatgagtct 3480 tgaaaggata tgaaatactg ccacatgccc tcttccctac ccttttaaca taccgggtgg 3540 gggcgaatta aacctgaaaa cagctgatgt c 3571 //