ID FN563987; SV 1; linear; genomic RNA; STD; VRL; 3167 BP. XX AC FN563987; XX DT 18-NOV-2010 (Rel. 106, Created) DT 18-NOV-2010 (Rel. 106, Last updated, Version 1) XX DE Rice black-streaked dwarf virus 2 segment 5, isolate GD, complete segment, DE genomic RNA XX KW complete viral segment, complete genome. XX OS Rice black-streaked dwarf virus 2 OC Viruses; Riboviria; Reoviridae; Spinareovirinae; Fijivirus. XX RN [1] RP 1-3167 RA Adams M.J.; RT ; RL Submitted (04-NOV-2009) to the INSDC. RL Adams M.J., Rothamsted Research, Department of Plant Pathology and RL Microbiology, Harpenden, Herts AL5 2JQ, UNITED KINGDOM. XX RN [2] RX AGRICOLA; IND44448932. RA Wang Q., Yang J., Zhou G.H., Zhang H.M., Chen J.P., Adams M.J.; RT "The Complete Genome Sequence of Two Isolates of Southern rice RT black-streaked dwarf virus, a New Member of the Genus Fijivirus"; RL J. Phytopathol. 158(11-1):733-737(2010). XX DR MD5; 351e8b0831121f5b063232b4f0f989fa. XX FH Key Location/Qualifiers FH FT source 1..3167 FT /organism="Rice black-streaked dwarf virus 2" FT /segment="5" FT /isolate="GD" FT /mol_type="genomic RNA" FT /country="China:Guangdong, Yangxi county" FT /collection_date="Oct-2005" FT /db_xref="taxon:566568" FT CDS 16..2835 FT /product="P5" FT /note="ORF5" FT /db_xref="GOA:E4WKW1" FT /db_xref="UniProtKB/TrEMBL:E4WKW1" FT /protein_id="CBH31248.1" FT /translation="MTYLKVKMTTDPFEMFLKNVLFDPTNEIRILNHEQADNTLLTTLM FT IIHDFEDTHTRDSILPQIVNEEKAEFDRTIESILEEVSDAFVANYHKILEENAKLGNPL FT APNYKNVVSVETCIPGLEKLFVDRERWELFTRLYRLDRKMSQKYPLEKMLKGNFLNISI FT SDETYYEYVSAMIIVFEVFLCVITVNSVYGGLIFSALNLMSGGHNYIPILGLLLHAIVQ FT AVKIYLDKSAANQIEEKTTSYVDKVTNNDVKNVMIDDTMFIFVDKPKEPIFQNFDISLK FT VHTHKSSAFQPFKNGFNALLTKIIRIHKIKGEILKVGYIDGISRDELIGASGKKLSYSE FT RHAIGIKYDQETKTLFISHPILRDAFDRLNKLSLLHDNLLLKDDFANIPSDFFTVDFNV FT PDSVSDYVVPFLNNADLRFSTQMSYNWRSINTEKRPYCFLKEGTSMNFYDPIFECFFPN FT HFIKIVKKDAITIDPTKVVTEDDMIHFGRLVERHEDLTYNKTTAYSILKFLNENCHSCG FT CSEYFANFVSDYLTSIDVLNHMKDSKLSKVEYHLKQEYENLFKKTKRQELSKTPIAEHS FT DFLSQCAYNESFFDIDFCFLEDGDCHSLVIRFAKRKPYFRFKDEKLEKLNVLSLYDLVV FT NCNHGELSSSSRVGWNLVDIDNMGSDDNLNRTIRRTNSKPRHFTYDLMMITFTGSVTQY FT LIPEWLGESLTVYEEKHEGARLFEKSSLFSTLSCIQATFLANHILIECLEKSSNKLISF FT MDGVISAMSTSIEFSTFKNTMLNNLKRCTQASEMNVAKQSPIAGTSRNKSFRSYLRSSR FT PNHVYDALSYCISKKQNGLFTSEEMCMSYNLRSFGKVGVDYSNGELSYDISSREELYNN FT HPCALRLRNLGHFVFGKHFRCKVCRNNYGTSFELSLCQLGHQETAIEAVRSNTITSQIR FT AKLQPTTAR" FT CDS 2459..3076 FT /product="hypothetical protein" FT /note="ORF5b" FT /db_xref="UniProtKB/TrEMBL:E4WKW2" FT /protein_id="CBH31249.1" FT /translation="MSMTRCPIVSPRNRTGCSHQKKCACLIISDHLEKWELTIATVNCH FT MISRQEKSCTTIIPVRFDLEISDILSLENILDAKYVATITELASNFPCVNWDIKKQQLK FT QFDPTQSLVKLEQNFNQLQRDDKLHFNCCYNYPTLHILNRILNVSKDVIPFLFDHNHNA FT NNKTMSDLSSTLNNCRDMKVSERHNLLRTLLFGSTLGVILHV" XX SQ Sequence 3167 BP; 999 A; 633 C; 568 G; 967 T; 0 other; aagttttttt cactcatgac atatttgaaa gtgaagatga ccacagatcc tttcgaaatg 60 tttttgaaaa atgtgctctt tgacccaaca aacgaaatcc gaattctcaa ccacgaacaa 120 gcagacaaca ctcttttgac cacactgatg attattcacg actttgaaga cacccacact 180 cgtgactcaa ttctgcccca aattgtcaat gaagaaaaag ccgaattcga tcgaactatt 240 gaatccattc ttgaagaagt tagcgatgcc tttgttgcta attatcacaa aattctcgaa 300 gaaaacgcga aattgggtaa ccctcttgct ccaaattaca aaaacgtcgt gtctgtagaa 360 acatgcattc caggtcttga aaaacttttt gttgatcgcg aaagatggga actgtttacc 420 cgtttgtatc ggctagatcg aaaaatgagt caaaaatatc ctctagagaa gatgctaaaa 480 ggcaatttcc ttaacatttc catttccgac gaaacttatt atgagtacgt ttccgctatg 540 atcatagttt ttgaagtgtt tctttgcgtt ataactgtca acagtgttta cggtggcttg 600 atctttagtg ctttgaactt gatgagcggc ggacataact acattcctat tcttggccta 660 cttttacacg ctattgttca agctgtaaaa atttatttgg ataaatcagc tgcgaatcaa 720 attgaagaaa agactacttc ctacgtagac aaagtgacaa acaacgacgt taaaaacgtt 780 atgattgatg acaccatgtt tatttttgtt gataaaccga aagaaccaat attccaaaat 840 ttcgacatca gtctaaaagt tcatactcac aaatcatctg cttttcaacc ttttaaaaac 900 ggtttcaatg ctctcttaac caaaatcatt cgtattcaca aaatcaaagg tgaaattctc 960 aaagttggtt acattgatgg aatcagtcgt gacgaattga ttggcgcatc aggaaagaaa 1020 ctctcgtatt ctgaaagaca tgccattgga attaagtatg atcaggaaac caagacattg 1080 ttcatcagtc accccattct acgagatgct tttgatcgtt tgaacaagct ttcgctgttg 1140 catgacaacc ttctgttgaa agacgacttc gctaacattc cgtctgattt tttcactgtt 1200 gattttaatg tgccagattc tgtcagtgat tacgtagtcc ccttcttaaa caatgctgat 1260 ttgaggtttt ccactcaaat gtcttacaac tggagaagca tcaatacgga aaaaagacct 1320 tactgcttct tgaaagaagg aactagcatg aacttttacg atccaatttt tgaatgcttt 1380 tttccaaacc atttcatcaa aattgtcaaa aaagacgcaa ttaccattga tcctacgaaa 1440 gttgtaactg aagatgacat gatccatttt ggacggttgg ttgaaagaca tgaagatttg 1500 acgtacaaca agactactgc ttattccatt ttgaaatttt taaatgaaaa ttgccacagt 1560 tgtggttgtt cagaatattt cgccaatttc gtttctgatt acttaacatc aatcgacgtt 1620 ctcaatcaca tgaaggattc aaaattatca aaggttgaat atcatctcaa gcaggaatac 1680 gaaaacttgt tcaagaagac aaaaagacaa gagctttcaa aaacgccgat tgctgaacat 1740 tcagatttcc tctctcaatg cgcatataac gagtctttct tcgatatcga tttttgcttc 1800 ctggaagatg gtgactgtca ttcactcgtc attcgattcg ctaaacgcaa accttatttt 1860 cgcttcaaag acgaaaaatt ggaaaaactc aacgttttgt ccctgtacga tcttgttgtg 1920 aattgtaatc acggagaact ttcttcatct agcagagttg gatggaattt ggttgacatt 1980 gacaacatgg gatcagatga taacctcaat cgtaccattc gtcgtactaa cagtaaacca 2040 cgccatttta cttacgatct aatgatgatt accttcactg gctcagttac gcaatacctc 2100 atacctgaat ggcttggtga aagtttgacg gtttacgaag aaaaacatga aggcgctcgt 2160 ctttttgaaa aatctagctt gttttcaact ttaagctgca ttcaggcaac gtttttagca 2220 aatcacatac taatcgaatg tttagaaaaa agctcgaaca aactgatttc tttcatggat 2280 ggtgtgatca gtgccatgtc cactagcatc gaattctcga ctttcaaaaa taccatgctc 2340 aacaacttga aaaggtgtac gcaggcttct gagatgaacg ttgcgaaaca gtctccaatc 2400 gcaggaacca gcagaaacaa gtcttttcgt tcctatttac gatcttctcg accaaaccat 2460 gtctatgacg cgttgtccta ttgtatctcc aagaaacaga acgggttgtt cacatcagaa 2520 gaaatgtgca tgtcttataa tctcagatca tttggaaaag tgggagttga ctatagcaac 2580 ggtgaattgt catatgatat ctcgtcaaga gaagagctgt acaacaatca tccctgtgcg 2640 cttcgactta gaaatctcgg acattttgtc tttggaaaac attttagatg caaagtatgt 2700 cgcaacaatt acggaactag cttcgaactt tccctgtgtc aattgggaca tcaagaaaca 2760 gcaattgaag cagttcgatc caacacaatc actagtcaaa ttagagcaaa acttcaacca 2820 actacagcgc gatgataagc ttcattttaa ttgttgttac aattatccta cgttacacat 2880 attaaaccgt attttaaatg tttctaaaga cgtaattcca tttttatttg atcacaatca 2940 caacgctaac aataaaacga tgtctgactt atcttctacg cttaacaatt gtcgtgatat 3000 gaaagtttct gagagacata acttacttag aactttactt ttcggaagca cgctaggagt 3060 tatacttcat gtttgagggt gtgttatccc tggctgcaag cgggaggcgc gtgaacaggt 3120 gttccacgtc ttcttagatg cgggggggag tgaatacagc tgatgtc 3167 //