ID FN563985; SV 1; linear; genomic RNA; STD; VRL; 3618 BP. XX AC FN563985; XX DT 18-NOV-2010 (Rel. 106, Created) DT 18-NOV-2010 (Rel. 106, Last updated, Version 1) XX DE Rice black-streaked dwarf virus 2 segment 3, isolate GD, complete segment, DE genomic RNA XX KW complete viral segment, complete genome. XX OS Rice black-streaked dwarf virus 2 OC Viruses; Riboviria; Reoviridae; Spinareovirinae; Fijivirus. XX RN [1] RP 1-3618 RA Adams M.J.; RT ; RL Submitted (04-NOV-2009) to the INSDC. RL Adams M.J., Rothamsted Research, Department of Plant Pathology and RL Microbiology, Harpenden, Herts AL5 2JQ, UNITED KINGDOM. XX RN [2] RX AGRICOLA; IND44448932. RA Wang Q., Yang J., Zhou G.H., Zhang H.M., Chen J.P., Adams M.J.; RT "The Complete Genome Sequence of Two Isolates of Southern rice RT black-streaked dwarf virus, a New Member of the Genus Fijivirus"; RL J. Phytopathol. 158(11-1):733-737(2010). XX DR MD5; 0f90a6d74ddda6d1857e267c00f0237c. XX FH Key Location/Qualifiers FH FT source 1..3618 FT /organism="Rice black-streaked dwarf virus 2" FT /segment="3" FT /isolate="GD" FT /mol_type="genomic RNA" FT /country="China:Guangdong, Yangxi county" FT /collection_date="Oct-2005" FT /db_xref="taxon:566568" FT CDS 34..3543 FT /product="P3" FT /note="ORF3" FT /db_xref="UniProtKB/TrEMBL:E4WKV9" FT /protein_id="CBH31246.1" FT /translation="MDPVQVLKYLLSQNYETKLQQLEQWQQQMQAAGFTTEYLQRSSNV FT LNIRRRIEESRRRLFEISAKLWQGSLFTKTISPNNLFLGFSECSGVNKSLFDSKNCDFG FT RFSLNFHCIPKYWILSGIFNDLVCYDHHNVKVTVSKSSNKISFRINDFIYIIPTIINFS FT FLSDNPDIKIDENCAFDVFVRIFQSLSDVVIDVCNFTFDDELLNVEWKNTIIRFAGDAN FT YFSVSSNLIFNSIDDYLGRKCTSMRNYFCYSISMNNLVMINDSLNNWESKQLLLKKNLV FT NSLHQMNLNSMIKISSLEKEVARVKTLKISLSYPRTICLHIPTHKLFINKYSHDLFSSF FT FKTQFVGWNFTYGERDRTVEPFICDVETKLKTNSSIVSTASTSHFQCNDFGSPDNMFLL FT NVLDKDGNVKKVICEAVFSLNYKEFKYLRFKSLDEKTGYQSQVYFFGLSEIRLYSENPK FT LQVLSLVSEHEGKLCHVFYATTSLILSFKILAENIEYLGVTSPQFTSEFSYNGKPLKLS FT GKLTLSEEFDGAQRRKCLTSEEFVLNEDVKCVFTSFICNGQRSTTKTFYNNQPWPGIRS FT RCHDNDSYSSAIQATCHTLILNSPFRAYNNYSDILSSVNDNVHYVEADGCFTERKDYLY FT WEVPISKFDMIYDDDPCVKLSNKSILTIPVTYRAFFEEVEGKFHPCLLSEVHYMDDYSV FT TQAGDAPELFLPFNKPVDIIYMEQSDRNEVSGELKIMSFDVKDFNAYVLPENLNTIMNI FT VGRLLDYESELALVYQTNNVLSGMMNDFEKRLSDLEKFCAFLEKSCNKKSGDSSSLYHL FT LGDVFTFVGEICVLQFPILGFCFILTGIMVDALGKITQDDIFDGISEIAFGGLLLCLGK FT RKPKFAYLQELGLDRRRASSNSYISDLASSIGRRRSYSSYHRYESINELSPSLSIKDRI FT FNQIRAHNPSVFDLHHNSGIILELKQKQKDNYSLLNSSYSRMKRSIGSTSHDDNLNYKL FT SCNNPESCELYELIVTTFDYYPILLNDNSFMIIKVQFKMRITSKPIMMKIEDIMFKYFH FT TSDSLGFNVFDESKYNDVKHLYDYFLRFSFDEIFNYLCVLSLLSKTSSFDNILVENFDK FT IYDTLYLTNHNSYMKNDAIHLRQVDSTIYKTMHGHSFSDQVPNESYFKMISTIVSHPEI FT LRF" XX SQ Sequence 3618 BP; 1180 A; 560 C; 596 G; 1282 T; 0 other; aagtttttat ccatgtcttt gaattgaaca gggatggatc cagtacaagt cctcaaatac 60 cttttgtctc aaaattatga aaccaaatta caacaactcg aacaatggca acaacaaatg 120 caagcagcag gcttcacaac agaatactta caacgatctt cgaacgtgct aaacattaga 180 cgcagaattg aagaatctag aaggcgttta ttcgaaatca gtgctaaact atggcaaggt 240 agtctattta ctaaaaccat ttctcctaat aatttatttc tcggcttcag tgaatgctca 300 ggagtgaaca aatcgctttt tgattctaaa aattgtgatt ttggaagatt cagtttaaac 360 tttcattgca tacctaaata ttggatatta tctggaatat ttaatgattt agtttgttat 420 gatcatcata atgtcaaagt cacagtaagc aaatcgtcaa ataaaatatc atttagaata 480 aatgacttta tttacataat tccaaccata atcaacttct catttttatc tgacaatcca 540 gatatcaaaa ttgatgaaaa ctgcgcattt gacgtatttg tacgaatttt tcaatcatta 600 agcgatgttg ttatagacgt ttgtaatttt acatttgacg atgaattatt gaatgttgaa 660 tggaaaaaca caatcattcg ttttgccggc gatgctaact atttctcagt ttcttcaaac 720 ctcattttca atagtattga cgattattta ggtagaaaat gcacttcaat gagaaattat 780 ttttgttatt caattagtat gaataacctg gtaatgatta atgactcctt aaataattgg 840 gaatccaaac aactgttact taaaaagaat ttagtaaaca gtcttcacca aatgaatctt 900 aattcaatga ttaaaatttc ttctttggaa aaggaagttg ctagagttaa gacgttaaaa 960 atatccttaa gttatcctcg tacgatttgt ttacacattc caacgcataa gctttttatt 1020 aataagtatt ctcatgactt attttcttca ttttttaaga ctcaatttgt tggttggaat 1080 tttacatatg gtgaaagaga tagaaccgtt gaacctttca tttgtgatgt tgaaacaaaa 1140 cttaaaacga attcttccat agtaagtaca gcatcaactt ctcactttca atgtaatgat 1200 tttggcagtc ctgataacat gtttttacta aatgttttag ataaggatgg taacgttaaa 1260 aaagtaattt gcgaagctgt gttttcatta aattacaaag agtttaaata tctgagattt 1320 aaatctctcg atgaaaaaac aggatatcaa agtcaagttt atttctttgg tttgagtgaa 1380 attaggcttt atagtgaaaa tcctaagttg caggttcttt cattagtgag tgaacatgaa 1440 ggtaaattat gtcatgtatt ttatgcaact acttctttaa ttttatcttt caaaattctg 1500 gctgaaaata tcgaatattt aggagttacg tctcctcaat tcacaagcga atttagttat 1560 aacggcaaac cattgaaact tagtgggaaa ttaactttaa gtgaggaatt cgatggagct 1620 caaaggagga aatgcttgac ttctgaagaa tttgttttaa acgaagatgt taaatgtgtg 1680 ttcacctcat ttatatgtaa cggtcaacgc tcgacaacca aaacattcta taacaaccaa 1740 ccttggcctg gcattcgtag cagatgtcac gataatgact cttattcaag cgccattcag 1800 gcgacctgtc acactttaat cttaaattca ccttttcgtg cttataataa ttatagtgat 1860 atattatcct cggtgaatga taatgtacat tatgttgaag cggatggttg ctttactgaa 1920 aggaaggatt acctctattg ggaagttcca atttcaaagt tcgacatgat ttacgacgat 1980 gatccttgtg ttaagttgtc aaacaaaagc attctcacca tcccagtaac atatcgcgct 2040 ttctttgaag aagtggaagg taaatttcac ccttgtcttt tatctgaagt acattatatg 2100 gatgattatt ctgttacgca agctggtgat gctccagaat tatttcttcc tttcaataaa 2160 ccagttgata ttatttacat ggaacagtct gacaggaatg aagtcagtgg agagttaaaa 2220 attatgtctt ttgatgttaa agactttaac gcttatgttt tacccgaaaa tctaaatacc 2280 attatgaata ttgtaggaag gttgttagac tatgaatctg aattagcgct agtataccag 2340 actaataatg tcttgtctgg tatgatgaat gatttcgaaa aacgattatc tgacttggaa 2400 aaattttgcg ccttcctcga aaaaagttgt aacaaaaaat cgggtgattc ttcttctttg 2460 tatcatttgt taggtgacgt tttcaccttt gttggtgaaa tttgtgttct tcaatttcct 2520 attttagggt tttgtttcat tttgactggt ataatggttg atgctcttgg aaaaattact 2580 caggatgata ttttcgatgg tattagcgaa attgcatttg gaggcttact actttgttta 2640 ggtaaaagaa aacctaaatt tgcatacctt caagaacttg gtttagatag acgacgtgct 2700 tcctcgaatt cttatattag tgatcttgcg tcttctatcg gacgtcgaag aagttattct 2760 agttatcata ggtatgaaag tattaacgaa ttgagtcctt ctctttctat aaaagaccga 2820 atttttaatc aaattcgagc acataatcct agcgtgttcg acttgcatca taattcaggt 2880 atcattttag agttaaagca aaaacaaaaa gataattatt ctctcttaaa ctctagttat 2940 tcacgtatga agagatctat tggtagtacg tctcatgatg ataacctcaa ttacaagtta 3000 tcgtgtaata atccggaatc atgtgaattg tatgaactga tagtcactac ttttgattac 3060 tatccaattc tattaaatga taactctttc atgatcatca aagtccagtt taaaatgaga 3120 attacttcca aacctattat gatgaaaatt gaagacatta tgtttaaata ttttcacact 3180 agtgattccc ttgggtttaa cgtttttgat gaaagtaaat ataatgatgt taaacatctt 3240 tatgattact ttcttagatt tagttttgat gagatattta attatttgtg tgtcttaagt 3300 ttattatcta aaacaagctc atttgataac atcctggttg aaaatttcga taaaatttac 3360 gacactcttt atctcacgaa tcataattca tacatgaaga acgatgctat tcatttacgt 3420 caagtcgatt ctacgattta taaaaccatg catggacatt cattttcaga tcaagtacct 3480 aatgaaagtt attttaaaat gatttcaact atagtttctc atccagagat tttgagattt 3540 taaggtactt tggttagcac gcggctggtg aaatctacga actgttggaa ttcgacacac 3600 atgggtacag ctatcgtc 3618 //