ID   FN557522; SV 1; circular; genomic DNA; STD; VRL; 2665 BP.
XX
AC   FN557522;
XX
DT   27-OCT-2009 (Rel. 102, Created)
DT   27-OCT-2009 (Rel. 102, Last updated, Version 1)
XX
DE   Sida micrantha mosaic virus segment DNA-A, complete sequence, isolate
DE   SimMV-[SP77]
XX
KW   complete genome.
XX
OS   Sida micrantha mosaic virus
OC   Viruses; Geminiviridae; Begomovirus.
XX
RN   [1]
RP   1-2665
RA   Jeske H.;
RT   ;
RL   Submitted (21-OCT-2009) to the INSDC.
RL   Jeske H., University of Stuttgart, Molecular biology and virology of
RL   plants, Pfaffenwaldring 57, Stuttgart, D 70550, GERMANY.
XX
RN   [2]
RA   Jeske H., Gotthard D., Kober S.;
RT   "In planta cloning of geminiviral DNA: the true Sida micrantha mosaic
RT   virus";
RL   J. Virol. Methods 0:0(2009).
XX
DR   MD5; fcfa7a4a1627245d05faa5a1e398a95a.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2665
FT                   /organism="Sida micrantha mosaic virus"
FT                   /host="Sida micrantha"
FT                   /isolate="SimMV-[SP77]"
FT                   /mol_type="genomic DNA"
FT                   /country="Brazil:Sao Paulo Campinas"
FT                   /collected_by="Alvaro Santos Costa"
FT                   /collection_date="1977"
FT                   /db_xref="taxon:228897"
FT   CDS             253..1008
FT                   /gene="AV1"
FT                   /product="coat protein"
FT                   /db_xref="GOA:D0RB08"
FT                   /db_xref="InterPro:IPR000263"
FT                   /db_xref="InterPro:IPR000650"
FT                   /db_xref="InterPro:IPR029053"
FT                   /db_xref="UniProtKB/TrEMBL:D0RB08"
FT                   /protein_id="CBH28929.1"
FT                   /translation="MPKRDPSWRKMAGTSKVSRSSNFSPRGGIGREFNKASEWVNRPMY
FT                   RKPRIYRTIRTPDVPRGCEGPCKVQSYEQRHDISHVGKVMCISDVTRGNGITHRVGKRF
FT                   CVKSVYILGKIWMDENIKLKNHTNSCMFWLVRDRRPYGTPMDFGQVFNMFDNEPSTATV
FT                   RKDLRDRFQVMHKFYAKVTGGQYASNEQALVKRFWKVNNHVVYNHQEGGKYENHTENAL
FT                   LLYMACTHASNPVYATLKIRIYFYDSITN"
FT   CDS             complement(1005..1403)
FT                   /gene="AC3"
FT                   /product="replication Enhancer"
FT                   /db_xref="GOA:D0RB09"
FT                   /db_xref="InterPro:IPR000657"
FT                   /db_xref="UniProtKB/TrEMBL:D0RB09"
FT                   /protein_id="CBH28930.1"
FT                   /translation="MDSRTGEFITVPQAENGVYIWEITNPLYFKIYRVESRPYKTTRMY
FT                   HIQIRFNHNLRRALGLHKAFLYFQVWTTSLTASGTTYLIRFRHLVMMYLDELGVISLNN
FT                   VIRAVRFATDRSYVRYVLENHEIKFKLY"
FT   CDS             complement(1150..1539)
FT                   /gene="AC2"
FT                   /product="transcriptional activator protein"
FT                   /db_xref="GOA:D0RB10"
FT                   /db_xref="InterPro:IPR000942"
FT                   /db_xref="UniProtKB/TrEMBL:D0RB10"
FT                   /protein_id="CBH28931.1"
FT                   /translation="MLNSSSSTPPSIKPRHRAAKRKGTRRRRIDLECGCTVYVHINCSN
FT                   HGFTHRGIHHCASGREWRLYLGDNKSPVFQDIPSRVQTVQNDKNVPHPDTVQPQPQESI
FT                   GSPQGIPVLPSLDDISDSFWNDLFD"
FT   CDS             complement(1460..2539)
FT                   /gene="AC1"
FT                   /product="replication-associated protein"
FT                   /db_xref="GOA:D0RB11"
FT                   /db_xref="InterPro:IPR001191"
FT                   /db_xref="InterPro:IPR001301"
FT                   /db_xref="InterPro:IPR022690"
FT                   /db_xref="InterPro:IPR022692"
FT                   /db_xref="UniProtKB/TrEMBL:D0RB11"
FT                   /protein_id="CBH28932.1"
FT                   /translation="MPSKPPRFRVQAKNIFLTYPQCSLTKEEALSQLQAIHLPSNKKFI
FT                   KICRELHEDGQPHLHILLQLEGKIQVTNNRLFDLVSPNRSARFHPNIQGAKSSSDVKSY
FT                   IDKDGDTVEWGEFQVDGRSARGGQQTANDAAADALNAPDKQTALRIIREKLPEKYLFQF
FT                   HNLNSNLDRIFSKAPEPWVPPFPISSFINVPEEMQEWADDYFGRSSAARPLRPMSLIVE
FT                   GDSRTGKTMWARALGPHNYLSGHMDFNSRVFSNEVEYNVIDDVTPQYLKMKHWKELIGA
FT                   QRDWQSNCKYGKPVQIKGGIPSIVLCNPGEEVSYKEFLDKEENAALKSWTLHNAKFIFI
FT                   DSPLYQTTSQSGEEERNSP"
XX
SQ   Sequence 2665 BP; 672 A; 603 C; 623 G; 767 T; 0 other;
     accggatggc cgcgcgattt tcccccccct cacgtagcgc tctggtggcc gctggatccc        60
     cctctccccc gctcccgtgg agccccccct gttcgcgcga tgttctcctt taattcaaat       120
     taaaggattt aactttagtc tgtccaatta tagtgcgcct gaggagctta gataactgtg       180
     ttaagacttg gtccctaagt tttatggccc ctataaaact aaagcaagca tgacgtcact       240
     ctttaattcg aaatgcctaa gcgggatccc tcatggcgca agatggcggg aacctcaaag       300
     gtaagccgct cttctaattt ctcaccacgt ggcggtatag gccgagaatt caacaaggcc       360
     tcggaatggg tcaaccggcc catgtacagg aagcccagga tatatcggac gatcagaacg       420
     cctgatgttc ctagaggctg tgaagggccc tgtaaggtcc agtcgtacga gcaacgtcac       480
     gatatttccc atgttgggaa ggtgatgtgt atatctgatg tgacacgcgg taacggtatt       540
     acccaccgtg tcggtaagcg tttttgtgtt aagtctgtgt atatactagg caagatatgg       600
     atggacgaga atatcaagct caagaaccac acgaacagtt gcatgttctg gttggtcagg       660
     gaccgtcgac catatggcac tccaatggat tttgggcagg tgttcaacat gtttgacaac       720
     gagcccagca ctgcaaccgt gaggaaggat ctccgtgacc gtttccaggt catgcacaag       780
     ttctatgcca aggtcacggg tggacagtat gccagcaatg agcaggcgct ggtcaagcgg       840
     ttctggaagg tcaacaatca tgttgtctat aaccaccagg agggtggcaa gtatgagaat       900
     cacacggaga acgctttatt attgtatatg gcatgtactc atgcatctaa ccctgtgtat       960
     gcaacgctga agatacgaat ctatttctac gattcgatca cgaattaata aagcttgaat      1020
     tttatttcat gattttccag tacatatctg acatatgatc tgtcagttgc aaagcgaaca      1080
     gctctaatta cattattaag ggaaattaca cctaattcat ctaagtacat catgactaaa      1140
     tgtctaaacc taatcaaata agtcgttcca gaagctgtca gagatgtcgt ccagacttgg      1200
     aagtacagga atgccttgtg gagacccaat gctctcctga ggttgtggtt gaaccgtatc      1260
     tggatgtggt acattcttgt cgttttgtac ggtctggact ctactcggta tatcttgaaa      1320
     tacaggggat ttgttatctc ccagatataa acgccattct ctgcctgagg cacagtgatg      1380
     aattcccctg tgcgtgaatc catgattgct gcagttgatg tggacgtaga cagtgcaccc      1440
     gcactccaga tctatccttc tacggcgagt tcctttcctc ttcgccgctc tgtgacgtgg      1500
     tttgatagag gggggagtcg atgaagatga atttagcatt gtgcagtgtc caggatttta      1560
     gagctgcatt ctcttctttg tcgaggaact ctttataact gacttcctcc ccaggattgc      1620
     agagcacgat tgatgggatt ccacctttaa tttgaactgg ctttccgtat ttacaatttg      1680
     actgccagtc tctttgggcc ccaatcaatt ctttccagtg tttcatcttt agatattgcg      1740
     gagtgacatc atcaatgacg ttatactcca cttcgtttga gaaaacacga gagttgaaat      1800
     ccatatgtcc actcaagtaa ttatgtgggc ctaacgcacg agcccacatc gtcttccctg      1860
     tccttgaatc accttcaact atcaaactca taggtctcaa tggccgcgca gcggaactcc      1920
     tcccaaaata atcatccgcc cactcttgca tctcttcggg aacgtttatg aaggaggaaa      1980
     tgggaaacgg agggacccac ggctctggtg cctttgagaa aattcgatct aaattagaat      2040
     ttaaattgtg aaactggaaa agatatttct caggcaattt ctctctaata attcggagag      2100
     ccgtttgttt atccggagca tttaacgcgt cagctgcagc gtcattagct gtctgttggc      2160
     ctcccctagc acttcttccg tcgacctgga attcccccca ttccactgta tctccgtcct      2220
     tgtcgatgta ggacttgacg tcggagctgg atttagctcc ctgaatgttc ggatggaaac      2280
     gtgctgacct atttggggat accaggtcga acaatctgtt atttgttact tggatctttc      2340
     cttccaattg caacaagatg tggaggtgag gttgcccatc ttcgtgaagc tctctgcata      2400
     tcttgatgaa ttttttattg gagggtaaat gaatagcttg caattgggaa agtgcctcct      2460
     cttttgtaag agagcactgt ggatatgtaa ggaaaatgtt tttagcttgt actctaaaac      2520
     gaggtggttt ggatggcatt tttgttaata aggcagtgta ctccggatga gagctcgctc      2580
     aataagtctc tatgaattgg agtatggagt acaatatata tgaggagttc ctagagtgca      2640
     taaagcggcc atccgttcta atatt                                            2665
//