ID   FN555202; SV 1; linear; genomic RNA; STD; VRL; 717 BP.
XX
AC   FN555202;
XX
DT   08-OCT-2009 (Rel. 102, Created)
DT   08-OCT-2009 (Rel. 102, Last updated, Version 1)
XX
DE   Cucumber mosaic virus partial 2a gene and 2b gene for gene silencing
DE   suppressor, genomic RNA, isolate PV0418
XX
KW   .
XX
OS   Cucumber mosaic virus (cucumber mosaic cucumovirus)
OC   Viruses; Riboviria; Bromoviridae; Cucumovirus.
XX
RN   [1]
RP   1-717
RA   Willingmann P.;
RT   ;
RL   Submitted (06-OCT-2009) to the INSDC.
RL   Willingmann P., Biozentrum Klein-Flottbek und Botanischer Garten
RL   Universitat, Phytomedizin, Ohnhorststr. 18, 22609 Hamburg, GERMANY.
XX
RN   [2]
RA   Zhang D., Tan X., Willingmann P., Adam G., Heinze C.;
RT   "The systemic infection of a resistant Capsicum sp. line by Cucumber mosaic
RT   virus is based on a 2b containing segment of RNA2 and interactions between
RT   viral components from RNA 1 and/or RNA 3";
RL   Unpublished.
XX
DR   MD5; d1e55fb4908a9e9387764c443620e94c.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..717
FT                   /organism="Cucumber mosaic virus"
FT                   /segment="RNA 2"
FT                   /host="Capsicum sp."
FT                   /strain="CMV"
FT                   /isolate="PV0418"
FT                   /serotype="II"
FT                   /mol_type="genomic RNA"
FT                   /country="USA"
FT                   /db_xref="taxon:12305"
FT   CDS             <1..489
FT                   /codon_start=1
FT                   /gene="2a"
FT                   /product="2a protein"
FT                   /note="polymerase"
FT                   /db_xref="UniProtKB/TrEMBL:D0AB24"
FT                   /protein_id="CBG76807.1"
FT                   /translation="DEFLFAHFMSFVDRLKFMGRMSQSCIDQLSIFFELKYKKSGNEAA
FT                   QVLGAFKKYTANFNAYKELYYSDRQQCDLVNTFCVSEFQVIRRTIVKKKKNGCVDSSGV
FT                   DRRPPPSPFAGGETSKTKVSRQKPASEGLQKSQRESAIYSETFPDVTIPRSRSRGLVS"
FT   CDS             287..589
FT                   /gene="2b"
FT                   /product="gene silencing suppressor"
FT                   /db_xref="InterPro:IPR004946"
FT                   /db_xref="UniProtKB/TrEMBL:D0AB25"
FT                   /protein_id="CBG76808.1"
FT                   /translation="MDVLTVVVSTADLHLAHLQEVKRRRRRSHVRNRRARGYKSPSERA
FT                   RSIARLFQMLPFHGVDPADWFPDVVRSPSVTSLVSYESFDDTDWFAGNEWAEGSF"
XX
SQ   Sequence 717 BP; 169 A; 154 C; 180 G; 214 T; 0 other;
     gatgaattct tgtttgctca ctttatgagt tttgttgaca ggctgaagtt tatgggcagg        60
     atgtcgcaat cctgtattga tcaattgtcc attttcttcg agttgaaata caagaagtcc       120
     gggaacgaag ccgcccaagt tttgggcgcg tttaagaagt acaccgctaa ttttaacgcc       180
     tataaggagc tttattactc tgaccgtcaa caatgtgact tggtcaatac gttttgtgta       240
     tctgagttcc aggtgattcg tcgcactatc gttaagaaga agaagaatgg atgtgttgac       300
     agtagtggtg tcgaccgccg acctccacct agcccatttg caggaggtga aacgtcgaag       360
     acgaaggtct cacgtcagaa accggcgagc gaggggttac aaaagtccca gcgagagagc       420
     gcgatctata gcgagacttt tccagatgtt accattccac ggagtagatc ccgcggattg       480
     gtttcctgat gtcgttcgct ctccgtccgt taccagcctt gtttcttatg aatcttttga       540
     tgatactgat tggtttgctg gtaacgaatg ggccgaaggg tcgttttgat ttccgaccct       600
     tcgtcgtccg aagacgttaa actacactct ctttattgcg agtgctgagt tggtagtttg       660
     ctctaaacta tctgaagtcg ctaaatccat tactggttgc gaacgggttg tccatcc          717
//