ID   FN555199; SV 1; linear; genomic RNA; STD; VRL; 741 BP.
XX
AC   FN555199;
XX
DT   08-OCT-2009 (Rel. 102, Created)
DT   08-OCT-2009 (Rel. 102, Last updated, Version 1)
XX
DE   Cucumber mosaic virus partial 2a gene and 2b gene for gene silencing
DE   suppressor, genomic RNA, isolate KS44
XX
KW   .
XX
OS   Cucumber mosaic virus (cucumber mosaic cucumovirus)
OC   Viruses; Riboviria; Bromoviridae; Cucumovirus.
XX
RN   [1]
RP   1-741
RA   Willingmann P.;
RT   ;
RL   Submitted (06-OCT-2009) to the INSDC.
RL   Willingmann P., Biozentrum Klein-Flottbek und Botanischer Garten
RL   Universitat, Phytomedizin, Ohnhorststr. 18, 22609 Hamburg, GERMANY.
XX
RN   [2]
RA   Zhang D., Tan X., Willingmann P., Adam G., Heinze C.;
RT   "The systemic infection of a resistant Capsicum sp. line by Cucumber mosaic
RT   virus is based on a 2b containing segment of RNA2 and interactions between
RT   viral components from RNA 1 and/or RNA 3";
RL   Unpublished.
XX
DR   MD5; c995bbacd25558d2133a1f1d709f8721.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..741
FT                   /organism="Cucumber mosaic virus"
FT                   /segment="RNA 2"
FT                   /host="Capsicum sp."
FT                   /strain="CMV"
FT                   /isolate="KS44"
FT                   /serotype="Ib"
FT                   /mol_type="genomic RNA"
FT                   /country="Thailand"
FT                   /collection_date="1991"
FT                   /db_xref="taxon:12305"
FT   CDS             <1..534
FT                   /codon_start=1
FT                   /gene="2a"
FT                   /product="2a protein"
FT                   /note="polymerase"
FT                   /db_xref="UniProtKB/TrEMBL:D0AB18"
FT                   /protein_id="CBG76801.1"
FT                   /translation="DEFLFAHFMSLVDRLKFLDRMTQSCIDQLSLFFELKYRKSGAEAA
FT                   LILGAFKKYTANFQSYKELYYSDRRQCELINSFSCAELRIERSISTKQRKKKDGIERRR
FT                   NDKRRTPAGSHDGGEETKTKVSQEESTGTRSQKSQRESAFKSQAIPIFTVLSDRWFGTD
FT                   RDVPPRECGGIVRV"
FT   CDS             293..628
FT                   /gene="2b"
FT                   /product="gene silencing suppressor"
FT                   /db_xref="InterPro:IPR004946"
FT                   /db_xref="UniProtKB/TrEMBL:D0AB19"
FT                   /protein_id="CBG76802.1"
FT                   /translation="MELNEGAMTNVELQLARMMEVRRQRRKSHKKNRRERGHKSPSERA
FT                   RSNLRLFRFLPFYQIDGSELIEMYHHASVVELSESEAPRFTLPAEEDHDFDDTDWFAGN
FT                   EWAEGAF"
XX
SQ   Sequence 741 BP; 200 A; 152 C; 188 G; 201 T; 0 other;
     gatgaattcc tgtttgctca cttcatgagc ttagtcgatc gattgaagtt tctggataga        60
     atgactcagt cctgcatcga tcaactttca ctctttttcg agttgaaata taggaagtct       120
     ggggctgagg ctgctttaat attaggcgcc tttaagaaat ataccgctaa tttccaatcc       180
     tataaagaac tctactattc agatcgtcgt cagtgcgaat tgatcaattc gtttagttgt       240
     gcagagttga ggattgagcg ttcgatttcc actaaacagc gaaagaagaa agatggaatt       300
     gaacgaaggc gcaatgacaa acgtcgaact ccagctggct cgcatgatgg aggtgaggag       360
     acaaagacga aagtctcaca agaagaatcg acgggaacga ggtcacaaaa gtcccagcga       420
     gagagcgcgt tcaaatctca ggctattccg atttttaccg ttttatcaga tagatggttc       480
     ggaactgata gagatgtacc accacgcgag tgtggtggaa ttgtccgagt ctgaggctcc       540
     tcggtttacg ttaccagcgg aagaagacca tgattttgac gacacagatt ggttcgctgg       600
     taatgaatgg gcggaaggtg cgttttgaat ctccccttcc tttttctccc tccagttttc       660
     tgaggcggga gctgagttgg cagtactgct acaaactgtc tgaagtcact aaacgctatg       720
     cggtgaacgg gttgtccatc c                                                 741
//