ID   FN555198; SV 1; linear; genomic RNA; STD; VRL; 738 BP.
XX
AC   FN555198;
XX
DT   08-OCT-2009 (Rel. 102, Created)
DT   08-OCT-2009 (Rel. 102, Last updated, Version 1)
XX
DE   Cucumber mosaic virus partial 2a gene and 2b gene for gene silencing
DE   suppressor, genomic RNA, isolate CN04
XX
KW   .
XX
OS   Cucumber mosaic virus (cucumber mosaic cucumovirus)
OC   Viruses; Riboviria; Bromoviridae; Cucumovirus.
XX
RN   [1]
RP   1-738
RA   Willingmann P.;
RT   ;
RL   Submitted (06-OCT-2009) to the INSDC.
RL   Willingmann P., Biozentrum Klein-Flottbek und Botanischer Garten
RL   Universitat, Phytomedizin, Ohnhorststr. 18, 22609 Hamburg, GERMANY.
XX
RN   [2]
RA   Zhang D., Tan X., Willingmann P., Adam G., Heinze C.;
RT   "The systemic infection of a resistant Capsicum sp. line by Cucumber mosaic
RT   virus is based on a 2b containing segment of RNA2 and interactions between
RT   viral components from RNA 1 and/or RNA 3";
RL   Unpublished.
XX
DR   MD5; 21c16d31a4b1363f4895d0cfae65cf03.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..738
FT                   /organism="Cucumber mosaic virus"
FT                   /segment="RNA 2"
FT                   /host="Capsicum sp."
FT                   /strain="CMV"
FT                   /isolate="CN04"
FT                   /serotype="Ib"
FT                   /mol_type="genomic RNA"
FT                   /country="China"
FT                   /collection_date="2002"
FT                   /db_xref="taxon:12305"
FT   CDS             <1..534
FT                   /codon_start=1
FT                   /gene="2a"
FT                   /product="2a protein"
FT                   /note="polymerase"
FT                   /db_xref="UniProtKB/TrEMBL:D0AB16"
FT                   /protein_id="CBG76799.1"
FT                   /translation="DEFLFAHFMSFVDRLKFLDRMTQSCIDQLSLFFELKYRKSGAEAA
FT                   LMLGAFKKYTANFQSYKELYYSDRRQCELINSFSCVELRIERSSSIKQRKKKNGIERRR
FT                   DDKRRTPTGPHGGGEETETKVSQEESTGTMSQKSQREGAFKSQTIPLPTVLSGRWFGTD
FT                   RDVPPRERGGIVRV"
FT   CDS             293..628
FT                   /gene="2b"
FT                   /product="gene silencing suppressor"
FT                   /db_xref="InterPro:IPR004946"
FT                   /db_xref="UniProtKB/TrEMBL:D0AB17"
FT                   /protein_id="CBG76800.1"
FT                   /translation="MELNEGAMTNVELQLARMVEAKRQRRRSHKKNRRERCHKSPSERA
FT                   RSNLRLFRFLPFYQVDGSELIEMYRHVNVAELSGSEAPCFTLPAEDDHDFDDTDWFAGN
FT                   EWAEGAF"
XX
SQ   Sequence 738 BP; 190 A; 159 C; 194 G; 195 T; 0 other;
     gatgaattct tgtttgctca cttcatgagc tttgttgatc gattgaagtt tttagaccga        60
     atgactcagt cttgcatcga tcagctttca ctcttcttcg agttgaaata caggaagtcc       120
     ggggcggagg ctgccttaat gctaggcgcc tttaagaaat ataccgctaa tttccagtcc       180
     tacaaagaac tctattattc agatcgtcgt cagtgcgaat tgatcaattc gtttagttgt       240
     gtagagttga ggattgagcg ttcgagttcc attaagcagc gaaagaagaa aaatggaatt       300
     gaacgaaggc gcgatgacaa acgtcgaact ccaactggcc cgcatggtgg aggcgaagag       360
     acagagacga aggtctcaca agaagaatcg acgggaacga tgtcacaaaa gtcccagcga       420
     gagggcgcgt tcaaatctca gactattccg cttcctaccg ttctatcagg tagatggttc       480
     ggaactgata gagatgtacc gccacgtgaa cgtggcggaa ttgtccgggt ctgaggcccc       540
     ttgttttacg ttgccagcgg aagatgacca tgatttcgac gatacagatt ggttcgctgg       600
     taacgaatgg gcggaaggag cgttctgaac ccctccttcc tttctccctc cagttttgag       660
     gcgggagctg agttggcagt attgctataa actgtctgaa gtcactaaac gttttatcgg       720
     tgaacgggtt gtccatcc                                                     738
//