ID FN555172; SV 1; circular; genomic DNA; STD; VRL; 2787 BP. XX AC FN555172; XX DT 06-DEC-2009 (Rel. 103, Created) DT 06-DEC-2009 (Rel. 103, Last updated, Version 1) XX DE Pepper yellow vein Mali virus, complete genome, isolate BF:Ban:Hpe1:09 XX KW complete genome. XX OS Pepper yellow vein Mali virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2787 RA Tiendrebeogo F.; RT ; RL Submitted (06-OCT-2009) to the INSDC. RL Tiendrebeogo F., Biochimie-Microbiologie, CRSBAN/UFR/SVT Universite de RL Ouagadougou, 03 BP 7131 Ouagadougou 03, Ouagadougou, BURKINA FASO. XX RN [2] RA Tiendrebeogo F., Lefeuvre P., Hoareau M., Traore E.S., Barro N., RA Traore A.S., Konate G., Lett J.M., Traore O.; RT "Complete genomic sequences of Pepper yellow vein Mali virus isolates RT infecting Capsicum sp. in Burkina Faso"; RL Unpublished. XX DR MD5; 2a5421621c4676746d4e7637bf737f30. XX FH Key Location/Qualifiers FH FT source 1..2787 FT /organism="Pepper yellow vein Mali virus" FT /host="Capsicum frutescens" FT /strain="Mali" FT /isolate="BF:Ban:Hpe1:09" FT /mol_type="genomic DNA" FT /country="Burkina Faso:Banfora" FT /collected_by="Fidele Tiendrebeogo and Oumar Traore" FT /collection_date="Apr-2009" FT /db_xref="taxon:260378" FT CDS 140..490 FT /gene="V2" FT /product="movement protein (MP)" FT /db_xref="GOA:B8ZWK8" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:B8ZWK8" FT /protein_id="CBG76610.1" FT /translation="MWDPLLNEFPESVHGFRCMLAIKFLQAVEETYEPNTLGHDLIRDL FT ISVIRARDYVEATRRYNHFHARLEGSSKAELRQPIHQPCCCPHCPRHKQASIMDLPAHV FT SKAQDVQNVQKP" FT CDS 300..1076 FT /gene="V1" FT /product="coat protein (CP)" FT /db_xref="GOA:D2EBD1" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:D2EBD1" FT /protein_id="CBG76611.1" FT /translation="MSKRPGDIIISTPVSKVRRRLNFDSPYTSRAAVPIAQGINRRRSW FT TYRPMYRKPRMYRMFRSPDVPRGCEGPCKVQSYEQRDDVKHTGIVRCVSDVTRGPGITH FT RVGKRFCIKSMYILGKIWMDENIKKQNHTNQVMFFLVRDRRPYGTSPQDFGQVFNMFDN FT EPSTATVKNDLRDRYQVLRKFHATVVGGPSGMKEQALVKRFFRVNTHVVYNHQEAAKYE FT NHTENALLLYMVCTHASNPVYATLKIRIYFYDAVTN" FT CDS complement(1073..1477) FT /gene="C3" FT /product="replication enhancer protein (REn)" FT /db_xref="GOA:B8ZWL0" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:B8ZWL0" FT /protein_id="CBG76612.1" FT /translation="MDSRTGEHITALQAKNGVFIWEINNPLYFTITNHEIRPFNMNQDI FT LTLQIRFNHNLRRALGIHKCFLNFKVWTTLRPQTGLFLRVFRFQVWKYLNNLGVISINN FT VIRAVDHVLYVVLVNTISVMETHEIKFNLY" FT CDS complement(1218..1625) FT /gene="C2" FT /product="transcription activator protein (TrAP)" FT /db_xref="GOA:B8ZWL1" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:B8ZWL1" FT /protein_id="CBG76613.1" FT /translation="MQPSSPSTGHSTQVPIKVIHRRAKTKAIRRKRIDLDCGCSYYLHI FT DCINHGFTHRGTHHCSSSKEWRFYMGDKQSPLFHDNKPRDQAIQHEPRHPHTPNTIQSQ FT PQEGTGDSQMFSQLQGLDDLTASDWSFLKGI" FT CDS complement(1549..2613) FT /gene="C1" FT /product="replication associated protein (Rep)" FT /db_xref="GOA:D2EBD4" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:D2EBD4" FT /protein_id="CBG76614.1" FT /translation="MAPPKRFKISSKNYFLTFPKCSLTKEEALEQLLNLSTPTNTKFIK FT VCRELHTNGEPHLHVLMQFEGKYQCTNNRFFDLVSPTRSTHFHPNIQGAKSSSDVKSYI FT DKDGDTIEWGVFQVDGRSARGGCRNANDAAAEALNADSAEAAMAIIREKLPKEFIFQYH FT NLKANLDRIFREPPAPYVSPFLSSSFTQVPEELEEWVSENVMGAAARPWRPNSIVVEGD FT SRTGKTVWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHWKEFFGAQRDW FT QSNTKYGKPIQIKGGIPSIFLCNPGPTSSYKEFLEEAKNYALKSWTLKNATFVTLDRPL FT YSSTNQGHPPQSQD" FT CDS complement(2199..2456) FT /gene="C4" FT /product="C4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:D2EBD5" FT /protein_id="CBG76615.1" FT /translation="MGNLISTCLCSSRGNTSARITDSSTWYPQPGQHISIRTFRELNQA FT PTSSPTSTRTETPLNGGYSRSTAEVLGEAAEMLTTQQQRP" XX SQ Sequence 2787 BP; 714 A; 577 C; 657 G; 839 T; 0 other; accggatggc cgcgcccccg aaaaagatat gggccccacg cactaatatg tgtcgaccaa 60 tcatatctca gcctgaaagg ctagatatgt ggtttttgtc ttttatatac ttgggcacca 120 agtatgggcc ttgtccatca tgtgggatcc acttttgaac gagtttcccg aatccgttca 180 cggatttcgt tgtatgctcg ccattaaatt tttgcaggcc gtggaggaaa cttacgagcc 240 caatactttg ggccacgatt taattaggga tcttattagt gttattaggg ctcgagacta 300 tgtcgaagcg acccggcgat ataatcattt ccacgcccgt ctcgaaggtt cgtcgaaggc 360 tgaacttcga cagcccatac accagccgtg ctgctgtccc cattgcccaa ggcataaaca 420 ggcgtcgatc atggacctac cggcccatgt atcgaaagcc caggatgtac agaatgttca 480 gaagccctga tgtccctcgt ggttgtgagg gtccgtgtaa ggttcagtcg tacgaacaga 540 gggatgatgt taagcacact ggtattgttc gctgcgttag tgatgtcaca cgtggcccgg 600 gtattactca tcgtgtagga aagagatttt gtattaagtc tatgtatatt ctgggtaaga 660 tctggatgga tgaaaatatc aagaagcaga atcacaccaa ccaggttatg ttttttttag 720 ttcgtgatag aaggccctat ggaaccagcc cacaggattt tgggcaggtg tttaacatgt 780 tcgataatga gcccagtact gctacggtga agaatgattt gcgtgatcgt tatcaagtcc 840 tcaggaaatt ccatgctact gtagttggtg gaccctctgg gatgaaagag caggctttag 900 taaagaggtt ttttagggtc aacacgcacg tcgtgtacaa tcatcaggaa gcagctaaat 960 atgagaatca tactgagaat gctttgttgt tgtatatggt atgtactcat gcctctaacc 1020 ctgtgtatgc tacgcttaag atacgcatct atttttatga tgccgttacg aattaataaa 1080 gattgaattt tatttcatga gtttccataa cggaaatcgt atttacaagt acaacatata 1140 acacatgatc aactgctcta attacattat tgatagaaat tacacctaaa ttattcaaat 1200 acttccaaac ttggaaccta aataccctta agaaaagacc agtctgaggc cgtaaggtcg 1260 tccagacctt gaagttgaga aaacatttgt gaatccccag tgccctcctg aggttgtgat 1320 tgaatcgtat ttggagtgtg aggatgtctt ggttcatgtt gaatggcctg atctcgtggt 1380 ttgttatcgt gaaatagagg ggattgttta tctcccatat aaaaacgcca ttctttgctt 1440 gaagagcagt gatgtgttcc cctgtgcgtg aatccatggt tgatgcagtc gatgtggagg 1500 tagtatgaac agccgcagtc gaggtctatt cgcttacggc gaatggcttt agtcttggct 1560 ctgcggtgga tgaccttgat tggtacttga gtagagtggc ctgtcgaggg tgacgaaggt 1620 tgcattcttt agtgtccagc tcttgagtgc gtaattcttc gcctcttcta ggaattcttt 1680 atatgaggat gttgggcctg gattgcagag gaagatagag ggaattccgc ctttaatttg 1740 aattggcttc ccgtactttg tgttgctttg ccagtccctc tgggccccaa agaattcttt 1800 ccagtgcttt agatagtgcg ggtcgacgtc atcaatgacg ttataccaag catcattaga 1860 ataaaccttt ggacttaagt ctaaatgacc acataagtaa ttatgtggcc ctaatgacct 1920 agcccaaaca gttttgccgg tacgactatc gccctctact acaatactat taggcctcca 1980 cggccgcgca gcggcaccca tgacattctc agacacccac tcttcaagtt cttctggaac 2040 ttgagtaaaa gaagacgaaa gaaaaggaga aacataagga gctgggggct cccgaaaaat 2100 cctatctaag ttagctttta aattatgata ttgaaaaata aattctttag ggagtttctc 2160 cctaataata gccatagcgg cttcagcgga atctgcattt aaggcctctg ctgctgcgtc 2220 gttagcattt ctgcagcctc ccctagcact tctgccgtcg acctggaata ccccccattc 2280 aatggtgtct ccgtccttgt cgatgtagga cttgacgtcg gagcttgatt tagctccctg 2340 aatgttcgga tggaaatgtg ttgacctggt tggggatacc aggtcgaaga atctgttatt 2400 cgtgcactgg tatttcccct cgaactgcat aagcacgtgg agatgaggtt ccccatttgt 2460 gtgcaactct ctgcagactt tgatgaattt tgtatttgtt ggggttgaca gatttagaag 2520 ttgctctaac gcttcctctt tagttaggga gcattttggg aaagtgagga aataattttt 2580 ggaacttatt ttaaaacgct ttggaggagc catttggtca atgtacccca attgaccgct 2640 cttggcattt ggtgcctaca attggggtaa tggggtacaa tatatactcg tacccctaat 2700 ggcattatgg taatttggta aagctctttt cactttaatt cgaaatttga attccgaatt 2760 ttttttagcg gccatccgta taatatt 2787 //