ID FN543469; SV 1; linear; genomic RNA; STD; VRL; 3644 BP. XX AC FN543469; XX DT 20-NOV-2009 (Rel. 102, Created) DT 20-NOV-2009 (Rel. 102, Last updated, Version 1) XX DE Beet black scorch virus, complete genome, isolate Ir-AzGh1 XX KW complete genome. XX OS Beet black scorch virus OC Viruses; Riboviria; Tombusviridae; Procedovirinae; Betanecrovirus. XX RN [1] RP 1-3644 RA Mehrvar M.; RT ; RL Submitted (19-AUG-2009) to the INSDC. RL Mehrvar M., Phytopathology (FYMY), UCL University, SE/AGRO:BAPA/FYMY, Croix RL du sud, 2, bte.03, Louvain-la-Neuve/1348, BELGIUM. XX RN [2] RA Mehrvar M., Bragard C.; RT "Iranian Beet black scorch virus is more diverse than anywhere else"; RL Unpublished. XX DR MD5; 30874199611d64dff094eaa00c2b9035. XX FH Key Location/Qualifiers FH FT source 1..3644 FT /organism="Beet black scorch virus" FT /isolate="Ir-AzGh1" FT /mol_type="genomic RNA" FT /country="Iran:Azarbaeijan Gharbi, Mohammad Yar" FT /isolation_source="Beta vulgaris" FT /collected_by="Mohsen Mehrvar" FT /db_xref="taxon:196375" FT CDS join(36..644,648..2210) FT /ribosomal_slippage FT /product="RNA-dependent RNA polymerase, p82" FT /note="ORF2" FT /note="produced by translational readthrough of ORF1" FT /db_xref="GOA:D1GV39" FT /db_xref="InterPro:IPR002166" FT /db_xref="InterPro:IPR007094" FT /db_xref="InterPro:IPR013707" FT /db_xref="UniProtKB/TrEMBL:D1GV39" FT /protein_id="CBA34994.1" FT /translation="MDSIPYVILRILDFIFHSIFFPSLLFIIKHNTTILWACLCAYGFY FT RTFRLVFKIKVEVHPATRAVFKDMVTRFQRESMFSPDDEVPEGIPIHEDVDLVSDPTHK FT DIKRVRASRRVSYAVRVAHVAKPKVGLLANTKANELVYSRLCRDEMVIHGVRPSHIAHA FT VPLAVAACFIPLDSDFLAASIRNCQEMEERRAVLGPSYGKGGLLCTSGFTTPTWRGNPE FT GLLVKRGPPLAKPRKLYRFSGFGTHIRYGVHDHSLGNVRRGLVERLFMVETKDGLAPTP FT KPTPGVYAKLSRFHDLVSANLISTTRLTYEQFLGFYSGRKLERYQQAVESLAIRPIGVQ FT DAWLSTFVKAEKLNISAKPDPAPRVIQPRSPRYNVEVGRFLRHAEEHLFDAINRVYGGR FT TVFKGLNADQAGMEMQAMWQEFDNPVGIGMDASRFDQHVSKEALEFEHKIWLSMYHGSD FT RKTLAKLLGMQIHNRGLARCPDGEIRYTVEGCRMSGDINTSSGNCYIMCATVHNYCSRL FT GVKRFRLADNGDDCMLVVEAKDEARVRQGLIEYYRELGFTMKVEPTVYELEHLEFCQTR FT PVLVDGAYRMVRNLHQGMSKDLHSLHDLGSRKAAEAWVSAVGSGGRVMNDGVPVLKSFF FT MQFPLSAAPKTRSDMSIALQEDWKYKFNRTGCFRNLAPTPQSRYSFWRAFGVLPDEQIA FT LENGFSRLSFDKLDQDIQEEVSLLQFSGA" FT CDS 36..647 FT /product="RNA polymerase, p23" FT /note="ORF1" FT /db_xref="GOA:D1GV40" FT /db_xref="InterPro:IPR013707" FT /db_xref="UniProtKB/TrEMBL:D1GV40" FT /protein_id="CBA34995.1" FT /translation="MDSIPYVILRILDFIFHSIFFPSLLFIIKHNTTILWACLCAYGFY FT RTFRLVFKIKVEVHPATRAVFKDMVTRFQRESMFSPDDEVPEGIPIHEDVDLVSDPTHK FT DIKRVRASRRVSYAVRVAHVAKPKVGLLANTKANELVYSRLCRDEMVIHGVRPSHIAHA FT VPLAVAACFIPLDSDFLAASIRNCQEMEERRAVLGPSYGK" FT CDS 2228..2419 FT /product="7K protein A, p7a" FT /note="ORF3" FT /db_xref="InterPro:IPR035284" FT /db_xref="UniProtKB/TrEMBL:Q8B5R7" FT /protein_id="CBA34996.1" FT /translation="MEQQRSEQRRERRVRSRSEDRKSMSDVGQSAVNREADVKKDMGPS FT VSMTVVGENVEFTQHFHF" FT CDS 2421..2618 FT /product="7K protein B, p7b" FT /note="ORF4" FT /db_xref="GOA:B3U3L9" FT /db_xref="UniProtKB/TrEMBL:B3U3L9" FT /protein_id="CBA34997.1" FT /translation="MGTIYVVREEPSGFLVWAFVVAIVCIIGLLSYTPPERLNHSYHEN FT NQKTQYITIGGASTSKVSTN" FT CDS 2434..2577 FT /product="5K protein A, p5a" FT /note="ORF5" FT /db_xref="UniProtKB/TrEMBL:D1GV43" FT /protein_id="CBA34998.1" FT /translation="MLFAKNPQGSSCGHSLLQLCVSLDSYRTPHLKDLTTLITKIIRRR FT NT" FT CDS 2647..3345 FT /product="coat protein, p25" FT /note="ORF6" FT /db_xref="GOA:D1GV44" FT /db_xref="InterPro:IPR000937" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:D1GV44" FT /protein_id="CBA34999.1" FT /translation="MAPKRNKGGRKIRMSDETVRAPAAGGVVQRTPGIPPRIRSTTIGT FT RVSNTELLAGVNVAAAGAFSVVGAGLFPSNLGWLNGIASNYSKFRWLSIKLIYFPIVPT FT TTAGAMTMALSYDPADATPTSFQQVQQMYNSITAPVWAGFDGATVQLLGDRPTTGAVCI FT DVDVNRFGFTWYGYATLAAITALTANDRNLYIPSVCNVATSGGSAATNVGNLMIKYSIE FT LIEPIPAAIN" FT CDS 2693..2929 FT /product="9K hypothetical protein, p9" FT /note="ORF7" FT /db_xref="GOA:D1GV45" FT /db_xref="UniProtKB/TrEMBL:D1GV45" FT /protein_id="CBA35000.1" FT /translation="MRRCELLLLVVWYNAHPVFPHVLGPPLLVREYPTQNYLLVSMLQQ FT QVHFLSLEPVFSLATLVGLTGLLPITASLDGFL" FT CDS 3410..3547 FT /product="5K hypothetical protein B, p5b" FT /note="ORF8" FT /db_xref="UniProtKB/TrEMBL:D1GV46" FT /protein_id="CBA35001.1" FT /translation="MEDCLHDAGMLSHTVRYRCWILVNRLDRFGWFQTDVSLEIFIVLS FT " XX SQ Sequence 3644 BP; 910 A; 856 C; 937 G; 941 T; 0 other; aagaaaccta accagtttct cgttgatcag cgatcatgga ttctatcccg tatgtgatcc 60 tgcgcatact tgattttatc tttcactcca tcttctttcc atcccttctc tttatcatca 120 aacacaacac caccatccta tgggcttgtc tatgtgccta tgggttctac cgtactttcc 180 gcctagtctt caagatcaag gttgaggtac acccagccac ccgtgctgtc tttaaggaca 240 tggtcacccg tttccagcgg gagagtatgt tctcacccga cgatgaagtg cctgagggca 300 tccctatcca cgaggacgta gaccttgtta gcgaccccac acacaaagat attaagaggg 360 tccgagctag caggcgagtc tcatacgctg tgagggttgc tcatgtagcc aagccaaagg 420 tgggactact cgcgaacacc aaggcaaatg agctggtgta ttctcggctt tgtcgagatg 480 agatggttat ccacggtgtg cgcccatcac acattgcgca tgcagtgccg ctcgctgtcg 540 cggcctgctt tattccactg gacagtgatt tcttggcagc atcaattaga aactgccagg 600 agatggaaga gcggagggcc gttttagggc cctcatatgg aaaataggga ggcctactct 660 gcaccagcgg gtttaccaca ccaacttggc gtggtaatcc agagggtttg ctggtgaaga 720 gaggaccacc tctggccaaa cccagaaaac tgtaccgttt ttctggattt gggactcata 780 tacggtacgg agtgcacgat cactccttgg gcaatgttcg gaggggactt gtcgagcggc 840 tattcatggt agagaccaag gatggtcttg ctccgacacc aaagcccacc cctggcgtgt 900 atgccaagtt atcccggttc catgaccttg ttagtgctaa tctaatctcg accaccagat 960 taacatacga gcaattcctc ggattttatt ctggtcgcaa attggagagg taccaacagg 1020 ctgtggagtc gttagcaatc cgccctatag gggtccagga tgcttggctc agcacgttcg 1080 ttaaggctga aaaactcaac atctcagcta aacccgaccc ggcacctagg gtcattcagc 1140 ctaggtcgcc gcggtacaat gtggaggttg gacggttcct cagacatgct gaggaacatc 1200 tgttcgatgc tattaaccgt gtgtatggtg gacggacagt attcaagggg ttgaatgctg 1260 atcaggctgg catggagatg caagccatgt ggcaagaatt tgacaatcct gtcggtattg 1320 gcatggacgc ctctcggttt gatcaacacg tttccaagga ggcgttggag ttcgaacaca 1380 agatatggtt gtccatgtac catggctctg acaggaaaac attggcaaag ctgttgggga 1440 tgcaaatcca caatcgcggt cttgctagat gtcctgatgg ggaaatcagg tacacggttg 1500 aagggtgtcg tatgtctgga gacattaaca cctcttccgg caactgttat ataatgtgcg 1560 caactgtgca caattattgc agccggttgg gtgttaagag gttcaggctt gccgacaatg 1620 gtgatgattg catgctagtc gtggaagcta aggatgaagc gcgtgtaagg caagggctta 1680 ttgaatacta tagggagttg ggattcacaa tgaaagtgga acccactgtc tatgaacttg 1740 agcatcttga gttttgccaa acccgcccag tcctggttga tggggcttac agaatggtgc 1800 gcaatctaca ccagggcatg tcgaaggacc tacactcctt gcatgatctt ggaagtagga 1860 aagctgccga ggcatgggtc tcagcagttg gcagtggggg acgagtgatg aatgacgggg 1920 tgcctgtact caagtcgttc tttatgcagt ttcccctttc tgctgctcct aaaaccaggt 1980 ctgatatgag tatagcgttg caggaagatt ggaaatacaa attcaatcgg actgggtgtt 2040 ttagaaattt agcacccact ccacaatccc gctactcatt ttggcgtgca tttggagtgt 2100 tgccagatga acagattgcc ctggaaaacg gattttctcg tctgagtttt gataaactag 2160 accaggatat ccaggaggag gttagccttc tccagttttc tggggcatga aaacctaacc 2220 acttttcatg gaacaacagc gtagtgaaca gcgtcgtgaa cgtagggtga gaagcagatc 2280 ggaggacagg aagtctatgt ctgatgtggg acagtctgca gtcaataggg aagcagacgt 2340 caagaaagac atgggtccat cggtctctat gacggtggtg ggggagaacg tggagttcac 2400 acaacatttc cacttctgaa atgggcacaa tctatgttgt tcgcgaagaa ccctcagggt 2460 tcctcgtgtg ggcattcgtt gttgcaattg tgtgtatcat tggactctta tcgtacaccc 2520 cacctgaaag acttaaccac tcttatcacg aaaataatca gaagacgcaa tacataacta 2580 ttggaggagc atccactagt aaggtttcca cgaactgaat ttactgcttt ctagtataga 2640 taataaatgg cacctaaacg caacaaagga ggtaggaaga tccgcatgtc cgatgagacg 2700 gtgcgagctc ctgctgctgg tggtgtggta caacgcacac ccggtattcc cccacgtatt 2760 aggtccacca ctattggtac gcgagtatcc aacacagaat tacttgctgg tgtcaatgtt 2820 gcagcagcag gtgcattttc tgtcgttgga gccggtcttt tccctagcaa ccttggttgg 2880 cttaacggga ttgcttccaa ttacagcaag tttagatggc tttctataaa gctcatctat 2940 tttcccattg tccctacaac cactgctggc gctatgacca tggctttatc atacgacccg 3000 gctgatgcta cacctaccag cttccaacaa gtgcaacaga tgtataacag cataactgca 3060 cctgtatggg ctggatttga tggagctact gttcagctat tgggggatcg cccaacaact 3120 ggtgccgtgt gtatcgacgt tgatgtcaat cgatttggat tcacatggta cgggtacgca 3180 accttagccg ctatcacagc actcactgca aacgacagga atctgtatat tcctagcgtt 3240 tgcaatgtgg ctacttctgg cggatcagct gcgactaatg ttggcaactt aatgataaag 3300 tacagcattg agctcattga gcccataccc gctgccatca attagacccc acatcctggt 3360 gtggttaatc cagtgaaaaa tattaggaaa tccatgggat tcacacccca tggaggattg 3420 cttgcatgat gcaggtatgc ttagtcacac tgtgaggtat cgatgctgga tcctggtaaa 3480 caggcttgac aggtttgggt ggttccaaac cgatgtatca ctcgagatat tcatagtact 3540 aagctagaaa acatcatgcg tgcgcacacg gccggctacg tcctatcgta gtcgggggct 3600 ccggagtgcg aaaccctctt atatacctgg tcttccaggt gccc 3644 //