ID FN436006; SV 1; circular; genomic DNA; STD; VRL; 2654 BP. XX AC FN436006; XX DT 09-JUN-2010 (Rel. 105, Created) DT 09-JUN-2010 (Rel. 105, Last updated, Version 1) XX DE Sida micrantha mosaic virus-Pantanal2 DNA B, complete sequence, isolate DE Mato grosso do sul:2:2007 XX KW complete genome. XX OS Sida micrantha mosaic virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2654 RA Paprotka T.; RT ; RL Submitted (12-AUG-2009) to the INSDC. RL Paprotka T., Molecular Biology and Virology of Plants, University of RL Stuttgart, Pfaffenwaldring 57, 70550 Stuttgart, GERMANY. XX RN [2] RA Paprotka T., Metzler V., Jeske H.; RT "The first DNA 1-like .. satellites in association with New World RT begomoviruses in natural infections"; RL Virology 0:0(2010). XX DR MD5; 4bd203819f09403fae44f66e38aa5f9b. XX FH Key Location/Qualifiers FH FT source 1..2654 FT /organism="Sida micrantha mosaic virus" FT /segment="DNA B" FT /host="Sida micrantha" FT /isolate="Brazil:Mato grosso do sul:2:2007" FT /mol_type="genomic DNA" FT /country="Brazil:Mato Grosso do Sul" FT /lat_lon="20.24 S 56.38 W" FT /collection_date="30-Nov-2007" FT /db_xref="taxon:228897" FT CDS 547..1317 FT /gene="AV1" FT /product="nuclear shuttle protein" FT /db_xref="GOA:D7FB16" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR001530" FT /db_xref="UniProtKB/TrEMBL:D7FB16" FT /protein_id="CBA18105.1" FT /translation="MFPIRYRRGWSSNQRRGYTRNPVFKRSYVGKRSDVKRRPSIPNKA FT QEESKMTTQRIHENQFGPEFVMGHNSAISTFITYPSLGKALPNRSRSYIKLRRLRFKGT FT VKVERVHADVNMDGSSPKIEGVFSLVVVVDRKPHLGSSGALHTFDELFGARIHSHGNLA FT IAPSLKDRFYIRHVFKRVLSVEKDTMMVDLEGSTTLSTRRFSCWSSFKDVDRESCNGVY FT ANISKNALLVYYCWMSDNMSKASTFVSFDLDYVG" FT CDS complement(1398..2279) FT /gene="BC1" FT /product="movement protein" FT /db_xref="GOA:D7FB17" FT /db_xref="InterPro:IPR000211" FT /db_xref="UniProtKB/TrEMBL:D7FB17" FT /protein_id="CBA18106.1" FT /translation="MESQLVNPPNAFKYIESQRDEYQLSHDLTEILLQFPSTASQLSAR FT LSRSCMKIDHCVIEYRQQVPINAVGSVVVEIHDKRMTDNETLQASWTFPIRCNIDLHYF FT SSSFFSLKDPIPWKLYYRVCDTNVHQRTHFAKFKGKLKLSTAKHSVDIPFRAPTVKILS FT KQFTEKDIDFSHVGYGKWERKMIRSASISGVGLHSPIEIRPGESWAVRSTVGITQSDAD FT SEIENATHPYRQLHRLGTSSLDPGDSASIVGAQRAQSNITMSMAQLSELVRATAQECIN FT SNCTPSQPKSLH" XX SQ Sequence 2654 BP; 633 A; 587 C; 665 G; 769 T; 0 other; accggatggc cgcgcgattt ttccccccct tgtcccccat cgcctacgtg gcgcgctggt 60 ggtcgtgcga ttccccttcc cttggtgtgc ccgcgctctc tctcccctgg ctcaattcaa 120 ttgagcgctt ttttggagtc cgcgaaatgg gttaaccgca ttttttgaag tccgccgaca 180 ctcggtccct ttaattcgaa ttaaaggggt tataactttt attgtccaat cattttgctt 240 gggttgtctc ctcgcgcgac gcttgctttt gcccaactgg gtcagatttg tttctgatcg 300 ttggataata atatatatta ttcagcctct ttaatttgaa tttggaatta ttggcaagcg 360 tcgtgctacc atgtcccatc gtacgaacct gatgagatgg accagttaag ttgcacctac 420 agagttaaat tgagcaagga atttatgttt aaattccctg gtgacatatg gtgagatcag 480 gttaagtgac cacgtctatt gtttgagtgg ccacagttaa catctgtgta ctagttattt 540 gtaaacatgt ttcccattag gtatagacgt ggttggtcgt ctaatcagcg acggggttac 600 acacgtaatc ccgtgtttaa gcgttcttat gttggcaaac gtagtgatgt gaaacgacga 660 cccagtattc ctaacaaggc ccaagaggag agtaagatga ccacccaacg gatacacgag 720 aaccagtttg ggcctgaatt tgttatgggc cacaattcag ccatctcgac cttcatcact 780 tacccctcgc tggggaaggc tctccccaat cgatccaggt catatatcaa gctaagacga 840 ctgcgtttca agggtacagt gaaggtggaa cgtgtacatg ccgacgtcaa catggacggg 900 tcaagtccaa agattgaagg agtcttctcc cttgtcgttg ttgtggaccg taaaccacat 960 ctcggttcat caggtgctct gcataccttc gatgagctat tcggtgcaag gatccacagc 1020 catggtaatc tcgcgatagc accctctctg aaagaccgtt tctacatacg acacgtgttc 1080 aaacgtgtgt tgtccgtgga gaaggatacc atgatggttg acctcgaagg gagcacgact 1140 ctctctacta ggcgttttag ttgctggtct tcgttcaagg acgttgaccg tgagtcatgt 1200 aatggcgtct acgctaacat tagcaagaac gccctcttag tgtattactg ttggatgtcg 1260 gataatatgt ccaaggcatc gacatttgta tcgtttgacc tcgattatgt tgggtaaatt 1320 ggaaatttac gaatggctta atgcaaataa ccacaatttt attaggtaat aaatacattt 1380 ggtcctctct aataatctca gtgcaatgat ttgggctgag aaggggtaca gttactgtta 1440 atgcattcct gggccgttgc cctgactagt tcgcttaatt gggccattga catcgttatg 1500 tttgattggg ccctctgtgc acccactatt gatgccgagt cacctgggtc tagactgctg 1560 gttccgagcc tgtgcagctg cctgtatggg tgcgtcgcgt tctctatttc ggagtccgcg 1620 tctgattgag tgatccctac agtgctcctg acagcccaag actctccagg cctgatttca 1680 attgggctgt gcaacccaac accagatatg gacgcggatc ggatcatctt cctctcccac 1740 tttccgtagc ccacgtggct gaaatcgatg tccttctctg taaactgctt ggaaaggatc 1800 ttcaccgtcg gggcacggaa aggtatgtct acagagtgtt tcgccgtcga tagcttcagc 1860 tttcccttga atttcgcaaa gtgggtcctc tgatggacgt tcgtgtcgca cactctgtag 1920 tacaatttcc atggaattgg gtccttgagt gagaagaacg acgaggaaaa gtaatggaga 1980 tcgatgttgc accgtatcgg aaacgtccac gatgcttgca gcgtctcgtt gtcagtcatt 2040 ctcttgtcat ggatctccac tactactgaa cccacggcgt taatgggtac ctgctgtctg 2100 tattctatga cgcagtggtc gattttcata cagctgcgac tgagccgtgc gcttaattgg 2160 gacgccgtgg agggaaattg caggagtatc tctgtcagat catgagaaag ctgatattca 2220 tcacgctgtg actcaatgta cttgaatgcg ttggggggat ttactagctg agattccatt 2280 aattctatta tcagaattag gccgcgcagc ggaaacgact gacaaaattg aacaggggaa 2340 gaagatgggt ctgaaagagt ctagggtttc tgctcgtaag agaaagagta aagtggagaa 2400 gatgataatg aagacgagtt gggttgggct attactggac ggattgagag gagatattgt 2460 ccaattgagg tgtttcgttt agtaactcgt ctgattcccc ttaaatagag gctgagtacg 2520 gaatggattt tgtgtaaata aaggggtgta ccccggatga gagctcgctc tataagtctt 2580 atgtattggg gtaatgggga caatatatag tagaacttcc taagggacta gtagcggcca 2640 tccttactaa tatt 2654 //