ID FN433599; SV 1; linear; genomic RNA; STD; VRL; 2452 BP. XX AC FN433599; XX DT 02-AUG-2010 (Rel. 105, Created) DT 02-AUG-2010 (Rel. 105, Last updated, Version 1) XX DE Apple stem pitting virus TGB ORF genes and CP gene, genomic RNA, isolate DE Palampur XX KW . XX OS Apple stem pitting virus OC Viruses; Riboviria; Tymovirales; Betaflexiviridae; Quinvirinae; Foveavirus. XX RN [1] RP 1-2452 RA Dhir S.; RT ; RL Submitted (01-AUG-2009) to the INSDC. RL Dhir S., Plant Virus Lab, Floriculture Division, Institute of Himalayan RL Bioresource Technology, IHBT, CSIR, Palampur, Himachal Pradesh. 176061, RL INDIA. XX RN [2] RA Dhir S., Hallan V., Zaidi A.A.; RT "Analysis of triple gene block and coat protein gene of Apple stem pitting RT virus isolate Palampur"; RL Unpublished. XX DR MD5; da0afb58c5c0fa60dc8c08fe3c0a26aa. XX FH Key Location/Qualifiers FH FT source 1..2452 FT /organism="Apple stem pitting virus" FT /host="Malus domestica cv. Red Chief" FT /isolate="Palampur" FT /mol_type="genomic RNA" FT /country="India:Palampur" FT /isolation_source="Leaf" FT /collected_by="Sunny Dhir" FT /identified_by="Sunny Dhir" FT /clone="RCP" FT /db_xref="taxon:35350" FT CDS 1..672 FT /gene="TGB ORF2" FT /product="triple gene block ORF2" FT /db_xref="GOA:E1UI14" FT /db_xref="InterPro:IPR027351" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:E1UI14" FT /protein_id="CBA12155.1" FT /translation="METVLSLLNEFGFERTVEPLSDPIVVHAVPGSGKTTLIKQALLQN FT HNIEAVTFGVPEKANIHGTYIKKAREGQRGRGNYSILDEYLSGEYSTGFNCLFSDPYQN FT HGDCLRAHFIGRCSHRFGRQTVQILRDLGYNIASSKEDIVERKNIFKLIEPEGVIICLE FT QSVEDFLKWHNVEYKLPCQGRGATFDVGTFIHEKPLEELVGPDLFVALTRHKDKLVLVS FT N" FT CDS 674..1069 FT /gene="TGB ORF3" FT /product="triple gene block ORF3" FT /db_xref="GOA:E1UI15" FT /db_xref="InterPro:IPR001896" FT /db_xref="UniProtKB/TrEMBL:E1UI15" FT /protein_id="CBA12156.1" FT /translation="MPFAQPPDYSKSVFPIAVGVAVAVVLFTLSRSTLPQVGDNIHNLP FT HGGNYQDGTKRISYCGPKDSFPSRSIISSGTPMIIGIIIFLILAIYVSEKWSGSGNRRC FT TCCVPGAPACTATLHEQLKSVHYSHHR" FT CDS 945..1172 FT /gene="TGB ORF4" FT /product="triple gene block ORF4" FT /db_xref="InterPro:IPR003411" FT /db_xref="UniProtKB/TrEMBL:E1UI16" FT /protein_id="CBA12157.1" FT /translation="MFPRSGLGLAIAAALVAYLVLLLAQQLYMSNSSQCTIVITGESVS FT IVGCVYSEAFIDLVKGLKPYYHPLGQGVVA" FT CDS 1262..2452 FT /gene="CP" FT /product="coat protein" FT /db_xref="GOA:E1UI17" FT /db_xref="InterPro:IPR000052" FT /db_xref="UniProtKB/TrEMBL:E1UI17" FT /protein_id="CBA12158.1" FT /translation="MASNGGQPPASAPMVSVEEPTASASAPISNVVSAAPVSAPIVSEP FT VISQVQSVAPLVSGFDPNLHGQLTNEQIRQAQGEAARRGYEEGSRPNQRVLPFTSTYAN FT YASMDSNPFETGTAFSEAPRVNMGPYPTSSSSGTSSEPNAQRIFPIQHGVSPSTHDANL FT VAQQTNAVSNGGTPFTLGNRAPRNATSNTGGMRRRLDSTGLRNIRYEPQAGVVASNQKI FT RAVGVALIGMGIPEHQLTEVGVYLARHCADVGASDKSTLLGTFPGSDITLEEVGTMIKQ FT TEGCTLRQYCAFYAKHVWNLMLQTQSPPANWVGKEFKFETRYAAFDFFFGVESTASLEP FT ADGLIRLPTQAERVANATSKEIQMYRIRSMEGTQAVNFGEVTGGKIGPKPVLSIRK" XX SQ Sequence 2452 BP; 644 A; 541 C; 593 G; 674 T; 0 other; atggaaactg tgcttagttt gttaaacgaa tttggctttg agagaactgt tgagcctttg 60 agtgacccaa ttgttgtgca cgctgttcct ggttctggaa agactacttt gataaagcag 120 gcgttgcttc aaaatcacaa tatagaagcc gttactttcg gagttcctga gaaggccaac 180 attcacggga catacatcaa gaaagctagg gaagggcaaa gagggagagg gaactacagc 240 attttggacg aatatttatc tggtgagtat tccacagggt tcaactgctt gttctctgat 300 ccttatcaaa atcacgggga ctgcttaaga gctcatttta ttggtcgctg ctcccatcgc 360 tttggcaggc agactgttca gattttaagg gacctcggtt acaacattgc gagcagcaaa 420 gaggatattg ttgagaggaa gaatattttc aaacttattg agcctgaagg ggttataatt 480 tgcttggaac aaagtgtgga ggacttcctc aagtggcata atgttgagta caaactgccc 540 tgtcaaggtc gaggtgccac atttgacgtg ggaacattca ttcacgaaaa acctctagag 600 gagctggttg gcccagatct gtttgtagct cttactcgcc ataaggataa gcttgtgctt 660 gtgagcaact agtatgcctt ttgctcaacc cccagattac tcaaaaagtg tttttccaat 720 agctgttggg gttgctgtcg cagtggtgct atttacgttg tccaggagca cattaccaca 780 ggtgggtgac aatattcata atttacctca cggaggtaat taccaggacg gcacaaaaag 840 gataagttat tgtggaccca aagattcttt tccaagcaga tcaataatat catccggaac 900 ccctatgatc ataggcataa tcattttctt gatacttgcg atctatgttt ccgagaagtg 960 gtctgggtct ggcaatcgcc gctgcacttg ttgcgtacct ggtgctcctg cttgcacagc 1020 aactctacat gagcaactca agtcagtgca ctatagtcat cacaggtgag tcagtttcca 1080 ttgttggttg tgtttattct gaagctttta tagatttagt taaaggcctt aagccttatt 1140 accacccatt aggtcagggt gtagtcgctt aatattatat aagtttgaaa gtgttctgtt 1200 gtgtgttcag ctttgaagtt agcttttgtc aaggtaagaa atctccactt caaattccat 1260 catggcctcc aatggtggtc aacctcccgc ctctgcccca atggtttctg tggaggaacc 1320 tactgcttct gcttcagccc caatttcaaa tgttgtgagt gcagctccag tcagtgcacc 1380 cattgttagt gagcctgtca tctctcaggt gcaatctgtc gcacctcttg tgagtgggtt 1440 tgatcccaat ctccatggac agttaacaaa tgaacaaatt cgtcaagctc agggtgaggc 1500 agctcggaga ggctatgagg aagggtctcg cccaaatcag cgtgtactac cattcaccag 1560 tacctatgcc aattacgcca gtatggattc caatcccttt gaaactggca ctgctttcag 1620 tgaggcacca agagtaaaca tgggccccta tccaacctct tcaagctcag gaacttcaag 1680 tgagcccaat gcccagcgga tattcccaat tcagcatggt gtgagtccat caactcatga 1740 tgccaacctt gtggctcagc aaacaaatgc tgttagtaat ggtggcacac ctttcacctt 1800 gggcaatcga gcaccgagga atgctacttc caacacaggg ggtatgagaa ggcgcctaga 1860 ttccacaggt ctcaggaaca tcagatatga accccaggct ggggttgttg caagcaacca 1920 aaagataagg gccgttggag tagcactcat tggaatgggc atccctgagc atcaactcac 1980 tgaagtaggt gtttatttgg caagacattg tgctgatgtt ggagcctccg acaaatctac 2040 attactgggg acctttccgg gttctgacat aactttggag gaggtcggta caatgatcaa 2100 gcagacagag gggtgcactc tgaggcagta ttgtgccttc tacgcgaagc atgtctggaa 2160 cctcatgctg caaactcaaa gtcctcctgc aaattgggtt ggtaaggaat ttaagttcga 2220 aactaggtac gctgccttcg acttcttctt tggagttgag agtactgcct cacttgaacc 2280 tgctgatggt ttgatcagat tacctactca ggccgagaga gtggcaaatg ccactagtaa 2340 ggaaatacag atgtaccgca tccgttccat ggaaggtacc caagctgtaa atttcggcga 2400 agtaaccggg ggcaagattg gacccaagcc tgtgttatcc attaggaagt ga 2452 //