ID   FN424171; SV 1; linear; genomic RNA; STD; VRL; 963 BP.
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AC   FN424171;
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DT   29-JUN-2011 (Rel. 109, Created)
DT   29-JUN-2011 (Rel. 109, Last updated, Version 1)
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DE   Plum pox virus partial polyprotein, coat protein region, genomic RNA,
DE   isolate APR 48
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KW   .
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OS   Plum pox virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
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RN   [1]
RP   1-963
RA   Varga A.;
RT   ;
RL   Submitted (29-JUN-2009) to the INSDC.
RL   Varga A., Centre for Plant Health, Canadian Food Inspection Agency, 8801
RL   East Saanich Road, Sidney, British Columbia, V8L 1H3, CANADA.
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RN   [2]
RA   Matic S., El Maghraby I., Law V., Varga A., Reed C., Myrta A., James D.;
RT   "Serological and molecular characterization of isolates of Plum pox virus
RT   El Amar strain to better understand its diversity, evolution, and unique
RT   geographical distribution";
RL   Unpublished.
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DR   MD5; b3b4ac71f71b48d05f5f503d57b86df1.
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FH   Key             Location/Qualifiers
FH
FT   source          1..963
FT                   /organism="Plum pox virus"
FT                   /host="Prunus armeniaca cv. Amar"
FT                   /isolate="APR 48"
FT                   /mol_type="genomic RNA"
FT                   /country="Egypt:El Amar, Nile Delta"
FT                   /db_xref="taxon:12211"
FT   CDS             <1..>963
FT                   /product="polyprotein"
FT                   /db_xref="GOA:F8J397"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:F8J397"
FT                   /protein_id="CAZ66776.1"
FT                   /translation="ADEKEDDEEEVDAGRSLVTTTQQPIVATTTQQTPITSTTLQATQA
FT                   MFNPIFTPATTEPTTRTVPHTTTTDTAPNASNALVQTGRDRDVDAGSIGTFTVPRLKAM
FT                   TSKLSLPKVKGKAIMNLNHLAFYSPAQVDLSNTRAPQSCFQTWYEGVRRDYDVTDDEMS
FT                   IILNGLMVWCIENGTSPNINGMWVMMDGETQVEYPIKPLLDHAKPTFRQIMAHFSNVAE
FT                   AYIEKRNYEKAYMPRYGIQRNLTDYSLARYAFDFYEMTSTTPVRAREAHIQMKAAALRN
FT                   AQNRLFGLDGNVGTQEEDTERHTAGDVNRNMHNLLGMRGV"
FT   mat_peptide     1..963
FT                   /product="coat protein"
XX
SQ   Sequence 963 BP; 300 A; 206 C; 233 G; 224 T; 0 other;
     gctgatgaga aggaagacga tgaagaagaa gtggatgcag ggaggtcttt agtcaccact        60
     acacagcaac caattgttgc cactacaact cagcaaactc caataacgag tacaacctta       120
     caagctacgc aggcaatgtt taatcccatt ttcactccag cgacgactga gccgaccact       180
     aggacagtgc ctcacacaac aaccactgat accgcaccca atgcttccaa tgcgttagtt       240
     caaacaggta gagacagaga tgttgatgcg ggttccattg ggactttcac agtgccacgc       300
     ttgaaagcaa tgacatcaaa gctctcactt ccaaaggtga aagggaaagc aattatgaat       360
     ttgaatcact tggctttcta cagtcctgca caagtggatt tgtcgaacac gcgagctcca       420
     cagtcctgct ttcaaacatg gtatgaagga gttagacgtg actatgacgt cactgatgat       480
     gaaatgagca ttattttgaa tgggcttatg gtctggtgca ttgagaatgg aacatccccg       540
     aatattaatg gaatgtgggt catgatggac ggggagacac aagtggagta tccaataaag       600
     ccattgttgg atcatgcgaa acccactttt agacaaatta tggcacattt cagtaacgtg       660
     gctgaagcgt atattgaaaa acggaattat gagaaagcat acatgccaag gtatggtatt       720
     cagcgcaacc tgacggatta cagcctcgcc agatacgcct ttgattttta cgaaatgact       780
     tcaacgacac ctgtgcgtgc acgtgaagct catatacaga tgaaggcagc ggcattgaga       840
     aatgcccaga atcgtttatt tggcttggat ggaaatgttg gaacacaaga agaggacaca       900
     gagaggcaca ccgctggtga tgttaatcgc aacatgcata acctcctcgg tatgagggga       960
     gtg                                                                     963
//