ID FN400772; SV 1; linear; genomic RNA; STD; VRL; 2982 BP. XX AC FN400772; XX DT 02-JUN-2010 (Rel. 105, Created) DT 02-JUN-2010 (Rel. 105, Last updated, Version 1) XX DE Impatiens necrotic spot virus segment S, genomic RNA, complete sequence, DE isolate YSMi-WX XX KW . XX OS Impatiens necrotic spot virus OC Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Ellioviricetes; OC Bunyavirales; Tospoviridae; Orthotospovirus. XX RN [1] RP 1-2982 RA Li F.; RT ; RL Submitted (31-MAY-2009) to the INSDC. RL Li F., Plant Pathology, Yunnan Agriculture University, CHINA. XX RN [2] RA Li F.; RT "Complete nucleotide sequence of S RNA of Impatiens necrotic spot virus RT isolated from Oncidium sp."; RL Unpublished. XX DR MD5; 11d4b2c1828e45876a4fcca840a9fd81. XX FH Key Location/Qualifiers FH FT source 1..2982 FT /organism="Impatiens necrotic spot virus" FT /segment="S" FT /host="Oncidium sp." FT /isolate="YSMi-WX" FT /mol_type="genomic RNA" FT /country="China:Yunnan, Songming" FT /db_xref="taxon:11612" FT CDS 85..1434 FT /gene="NSs" FT /product="nonstructural protein" FT /db_xref="InterPro:IPR004915" FT /db_xref="UniProtKB/TrEMBL:D7F819" FT /protein_id="CAZ63989.1" FT /translation="MSSAMYETIIKSKSSIWGTTSSGKAVVDSYWIHDQSSGKKLVEAQ FT LYSDSRSKTSFCYTGKVGFLPTEEKEIISENVFVPIFDDIDLNFSFSGDVVEILVRSNT FT TNTNGVKHQGHLKVLSSQLLRMFEEQIAVPEITSRFGLKESDIFPPNNFIEAANKGSLS FT CVKEVLFDVKYSNNQSMGKVSVLSPTRSVHEWLYTLKPVFNQSQTNNRTVNTLAVKSLA FT MSATSDLMSDTHSFVRLNNNKPFKISLWMRIPKIMKSNTYSRFFTLSDESSPKEYYISI FT QCLPNHNNVETALNITLISKPLLESTPSSSDHKIEMNFSDLKEPYNVIHDMSYPQRIVH FT SLLEIHTELAQTICDSVQQDIIVFTINEPDLKPKKFELGKKTLNYSEDGYGRKYFLSQT FT LKSLPRNSQTMSYLDSIQMPDWKFDYAAGEIKISPRSEDVLKAISKLDLN" FT CDS complement(2045..2833) FT /gene="N" FT /product="nucleocapsid protein" FT /db_xref="GOA:Q76D17" FT /db_xref="InterPro:IPR002517" FT /db_xref="UniProtKB/TrEMBL:Q76D17" FT /protein_id="CAZ63990.1" FT /translation="MNKAKITKENIVKLLTQSDSLEFEETQNEGSFNFTDFFTNNREKI FT QNMTTASCLSFLKNRQSIMRVIKSADFTFGSVTIKKTRNNSERVGVNDMTFRRLDAMVR FT VHLVGMIKDNGSALTEAINSLPSHPLIASYGLATTDLKSCVLGVLLGGSLPLIASVLNF FT EIASLVLAIYQDAKHVELGIDMSKFSTKEAVGKVCTVLKSKGYSMNSVEIGKAKQYADI FT LKACSPKAKGLAAMDHYKEGLTSIYSMFNATIDFGKNDSI" XX SQ Sequence 2982 BP; 977 A; 528 C; 452 G; 1025 T; 0 other; caagaagagc aattgtgtcc ccgaacaacc aagctacaac agaacttaca atattgtcaa 60 ttacattact acttccattt taacatgtct agtgcaatgt atgaaacaat tatcaaatcg 120 aagtcctcaa tctggggaac aacatcttcg ggtaaagcag tagtagatag ttattggatt 180 catgaccaat cttccggaaa gaagttggtc gaagctcaac tctattctga ctccaggagc 240 aagaccagtt tctgttacac tggtaaagtt ggctttctcc caacagaaga aaaagaaatt 300 ataagtgaga atgtttttgt gcctattttt gatgacattg atctgaattt ctccttttca 360 ggagatgttg tcgaaattct ggtcagatct aacacaacaa acacaaacgg tgttaagcat 420 caaggccatc tcaaagtgtt atcctctcag ttgctcagaa tgtttgaaga gcaaatagca 480 gtgcctgaaa ttacttcaag attcggtctg aaagaatctg acatcttccc tccaaataat 540 ttcattgaag ctgcaaataa aggatcattg tcttgtgtca aagaagttct ttttgatgtc 600 aagtattcaa acaaccaatc catgggcaaa gtcagtgttc tttctcctac cagaagtgtt 660 catgaatggc tgtacacact taagcctgtt tttaaccaat cccagaccaa caacaggaca 720 gtaaacactt tggctgtaaa atcactggca atgtctgcaa cttctgactt aatgtcagat 780 actcattcat ttgtcaggct caataataac aagcccttta aaatcagcct ttggatgcgc 840 atccctaaaa taatgaaatc aaacacatac agccgcttct tcaccctgtc tgatgaatct 900 tctcctaaag agtattatat aagcattcaa tgtcttccaa atcacaacaa tgttgaaaca 960 gcattgaata taactttgat cagcaaacct cttcttgaat caactccttc tagcagtgat 1020 cataaaattg agatgaattt ttctgaccta aaagaacctt acaatgttat ccatgatatg 1080 tcatatcctc aaagaattgt tcattcactt cttgaaatcc acacagaact tgctcaaact 1140 atctgtgaca gtgttcagca agacataatt gtcttcacta taaatgagcc agatctaaag 1200 ccaaaaaagt ttgagctagg gaaaaagact ttaaattatt cagaagatgg ttatgggaga 1260 aaatatttcc tttctcagac cttgaaaagt cttccaagaa actcacaaac aatgtcttat 1320 ttggatagca tccagatgcc cgattggaaa tttgactatg ctgcaggtga aataaaaatt 1380 tctcctaggt cagaggatgt tttgaaagct atttctaaat tagatttaaa ttaaacttgg 1440 ttaaacttgt tcctaagtaa agtttgttta catgcattta gatcagatca aacaaatcta 1500 ataacagata aaccaaaaac aatcatatga aataaataaa tgaacataaa atatataaaa 1560 ataacaaaaa atcataaaat aataaaaaac caaaaaaaga tgccttcggg cacaatttgg 1620 ttgcttttaa ataaatgctt taaaatgaat gtattagtaa attataaact ttaaatccaa 1680 tctactcacg aatttggcca aaattttgtt tttgtttttt gttttttttt ttgttttttg 1740 tttttgtttt gttttatttg ttttttattg gtttttgttt ttttgtttta tttttattta 1800 tatatatata tatatatttt ttagttgttt ttattgtttt tattattttt tgtagctttt 1860 ttattgttta tttcacacgc agaccctttt tagtttatat attaaaacac acattaaact 1920 tatttcaaat aatttataaa agcacactta atacactcaa acaataatta attattttta 1980 tttttatttt tatttattta aatgcattta acacaacaca aagcaaacca agcttaaatc 2040 tcttttaaat agagtcattt ttcccaaaat caatagtagc attaaacatg ctgtaaatgg 2100 aggtaagccc ttctttgtag tggtccattg cagcaagtcc tttagctttt ggactacaag 2160 cctttagtat atctgcatat tgttttgcct taccaatttc aacagagttc atgctatatc 2220 ctttgctttt tagaactgtg cacactttcc caactgcctc tttagtgcta aacttagaca 2280 tgtcaattcc aagctcaaca tgtttagcat cttgataaat agccagaact agtgaagcta 2340 tttcaaaatt cagtacagat gctatcagag gaagacttcc tcctaagaga acacccaaga 2400 cacaagattt caaatctgtg gttgcaagac catatgaggc aatcagaggg tgacttggaa 2460 ggctgtttat agcttcagtc agagcagatc cattgtcctt tatcattcca acaagatgaa 2520 ctctaaccat tgcatcaagt cttcggaaag tcatatcatt gactccaact ctttctgaat 2580 tgtttctagt tttcttaatt gtgactgatc caaaagtgaa gtcagcactc ttaatgactc 2640 tcattataga ttgcctattc ttgaggaagg ataggcaaga tgcagtagtc atgttctgaa 2700 tcttttcacg gttgttggta aagaagtcag tgaaattgaa agatccttca ttttgagttt 2760 cctcaaattc taaggaatca gattgagtca aaagcttgac tatgttctcc ttggtaatct 2820 ttgctttgtt catcttgatc tgctgacttt actaacttta aaacttaaag tgttcaaatt 2880 actaaatagt acttgcggtt aaagtagtat ttggtaaaat ttgtaatttt tcagtttcta 2940 gctttggatt atatgatgtt atattcgtga cacaattgct ct 2982 //