ID FN396971; SV 1; circular; genomic DNA; STD; VRL; 2737 BP. XX AC FN396971; XX DT 05-JUN-2009 (Rel. 101, Created) DT 05-JUN-2009 (Rel. 101, Last updated, Version 1) XX DE Ramie mosaic virus complete DNA-A genome, isolate Z1 XX KW complete genome. XX OS Ramie mosaic virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2737 RA Zhou X.P.; RT ; RL Submitted (31-MAY-2009) to the INSDC. RL Zhou X.P., Zhejiang University, Institute of Biotechnology, NO. 268, RL Kaixuan Road, Hangzhou, Zhejiang, 310029, CHINA. XX RN [2] RA Li J., Qian Y.; RT "Molecular Characterization of Ramie mosaic virus in China"; RL Unpublished. XX DR MD5; d1aa12bf4f4c47e614787f58d0b8a8a5. XX FH Key Location/Qualifiers FH FT source 1..2737 FT /organism="Ramie mosaic virus" FT /mol_type="genomic DNA" FT /country="China:Zhejiang province" FT /lat_lon="30.26 N 120.18 E" FT /isolation_source="ramie" FT /collected_by="Xue-ping Zhou" FT /collection_date="18-Aug-2008" FT /db_xref="taxon:486809" FT CDS 132..500 FT /gene="AV2" FT /product="AV2 protein" FT /db_xref="GOA:C5J9K1" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:C5J9K1" FT /protein_id="CAZ40080.1" FT /translation="MWDPLVNDFPDTVHALRCMLAIKYCQLVANTYDPDTVGYDLIRDL FT ILVIRARNYVEASRRYSDFNSRLQSTPPAEFRQPRDQPCRCPHCPRHKQKTGLDVQAHV FT SQAQDVQDVQKPRCSSWV" FT CDS 292..1065 FT /gene="AV1" FT /product="coat protein" FT /db_xref="GOA:C5J9J4" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:C5J9J4" FT /protein_id="CAZ40081.1" FT /translation="MSKRPADIVISTPASKVRRRLNFDSPGISRAAAPTVLVTNRRRAW FT TYRPMYRKPKMYRMFKSPDVPRGCEGPCKVQSFEARHDIAHTGKVICISDVTRGGGLTH FT RTGKRFCVKSVYVLGKIWMDENVKVKNHTNTAMFFVVRDRRPYGTPQDFGQVFNMYDNE FT PSTATVKNDLRDRFQVIRRFTSTVTGGQYASKEQALVKKYMKVNAHVVYNHQEAGKYEN FT HTENALLLYMACTHASNPVYATLKIRIYFYDSVSN" FT CDS complement(1062..1466) FT /gene="AC3" FT /product="AC3 protein" FT /db_xref="GOA:C5J9K3" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:C5J9K3" FT /protein_id="CAZ40082.1" FT /translation="MDSRTGEPITATQAESGVYTWTVRNPLYFKIVRHDVNVFLTRKDI FT ITVQVQFNHNLRRALGIHQCFLTCRIWTRLRPQTWRFLSVFRYQCIKYLNNLGIISINN FT VVRAIRHVLYDVLDGTIDAELSHLIKFKLY" FT CDS complement(1207..1611) FT /gene="AC2" FT /product="AC2 protein" FT /db_xref="GOA:C5J9K4" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:C5J9K4" FT /protein_id="CAZ40083.1" FT /translation="MLNSSSSPKRSTQVPIKVQHKIAKKAIRRRRVDLPCGCTYYFAIE FT CASHGFTHRGTHHCNSGREWRLYLDGQKSPIFQDRPPRRECIPDKEGHHHSPGPVQPQP FT EESVGDSPVFSDLPDLDSFTSSDLAFLKCI" FT CDS complement(1514..2599) FT /gene="AC1" FT /product="replication protein" FT /db_xref="GOA:C5J9K5" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:C5J9K5" FT /protein_id="CAZ40084.1" FT /translation="MAPPRRFAINAKNYFLTYPQCPLSKEEALSQLLNLSTPTNKKFIK FT ICRELHEDGSPHLHVLIQFEGKYKCQNNRFFDLVSPTRSAHFHPNIQGAKSSSDVKAYM FT EKDGDTSEWGEFQIDGRSARGGQQSANDAYAKAINTGSKLLALNVIKELAPKDYVLQFH FT NLNANLDRIFAAPVEAFNCPFLSSSFDQVPEEIECWVADNIKDAAARPWRPISIVIEGE FT SRTGKTMWARSLGPHNYLCGHLDLSPRVYNNDAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPIQIKGGIPTIFLCNPGPTSSYKEYLDEERNTSLKRWALQNAKFFFISEAL FT YSGAHQGPTQNSQEGYSQTES" FT CDS complement(2245..2442) FT /gene="AC4" FT /product="AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:C5J9K6" FT /protein_id="CAZ40085.1" FT /translation="MGALTSMFSFNSRANINARITDSSTWYPQPGQHISIQTFRELNPA FT PMSRHTWRKTEIPPNGESSR" XX SQ Sequence 2737 BP; 712 A; 599 C; 643 G; 783 T; 0 other; accggatggc cgcgattttt tttgtagtgg gccccaccac gcactgctgt ctgccactca 60 ggacgctccc tcacagctag tttagtgcgt ggtcccttta aatcacttgc gcaccaagtt 120 gtaggcgcaa aatgtgggat ccattagtaa atgattttcc agatactgta cacgctctgc 180 gttgtatgtt agctattaaa tactgtcagc ttgtagcaaa tacatacgac ccggatacgg 240 tgggatacga tctcatacgt gatttgatac ttgtcatacg tgcacgtaat tatgtcgaag 300 cgtcccgccg atatagtgat ttcaactccc gcctccaaag tacgccgccg gctgaatttc 360 gacagccccg ggatcagccg tgccgctgcc cccactgtcc tcgtcacaaa cagaagacgg 420 gcttggacgt acaggcccat gtatcgcaag cccaagatgt acaggatgtt caaaagccca 480 gatgttcctc gtgggtgtga aggcccatgt aaggtccagt catttgaagc ccgtcatgac 540 atagcccata ctggtaaggt tatttgtatc tcagatgtca ctcgtggtgg tgggctgacc 600 caccgaacag gcaagaggtt ctgcgtaaag tccgtttacg tattgggtaa gatctggatg 660 gatgagaatg tcaaggttaa aaaccataca aatacagcca tgttttttgt tgttcgagac 720 aggaggcctt atggaacccc gcaggatttt ggccaggtgt tcaacatgta tgacaatgag 780 cccagtactg ccaccgtgaa gaacgatctt agagatcgtt ttcaagtgat acgtcgtttt 840 acgtcaactg tcactggagg tcaatatgcg agcaaggaac aagccctggt caagaagtac 900 atgaaggtca atgctcatgt ggtttataac catcaagaag ctgggaagta cgagaatcat 960 actgagaatg ctctattgtt gtatatggca tgtactcatg ctagtaatcc cgtgtatgca 1020 actttgaaaa tcaggatcta tttttatgat tctgtcagca attaataaag tttgaatttt 1080 attaaatgtg ataactcagc atcaatcgtg ccgtcaagta catcgtacaa tacatgccga 1140 atggctctaa caacattgtt aatactaata attcctaaat tatttaaata tttaatacat 1200 tgatatctaa atacacttaa gaaacgccag gtctgaggac gtaaacgagt ccagatccgg 1260 caggtcagaa aacactggtg aatccccaac gctctcctca ggttgtggtt gaactggacc 1320 tggactgtga tgatgtcctt ccttgtcagg aatacattca cgtcgtggcg gacgatcttg 1380 aaatataggg gatttctgac cgtccaggta tagacgccac tctctgcctg agttgcagtg 1440 atgggttccc ctgtgcgtga atccatgcga agcgcactca attgcaaagt aatatgtgca 1500 cccgcaagga aggtcaactc tccgtctgcg aatagccttc ttggctattt tgtgttggac 1560 cttgatgggc acctgagtag agcgcttcgg agatgaagaa gaatttagca ttttgtaatg 1620 cccacctttt gagagatgta ttccgctcct cgtccagata ttctttatag gacgaagttg 1680 ggcctggatt gcagaggaag atagtgggaa taccaccttt aatttgaatt ggtttcccgt 1740 atttggtgtt gctttgccag tccctttggg cccccatgaa ctctttaaag tgctttaagt 1800 agtgggggtc gacatcatca atcacgttgt accaggcatc attattgtac actctcggac 1860 tgaggtctaa gtgaccacat agataattat gtggccccaa cgacctggcc cacattgttt 1920 tgccagtacg actctcgccc tcgatgacaa tgctaatggg tctccacggc cgcgcagcgg 1980 catctttgat gttatctgca acccagcatt caatctcctc ggggacttga tcaaaggacg 2040 atgataagaa cggacaatta aatgcctcta ctggcgctgc aaatattcta tctaaattgg 2100 catttaaatt atgaaactgt aaaacataat ctttaggagc gagctcctta atcacattaa 2160 gagccaataa tttactaccg gtgttaatcg cctttgcgta agcatcattg gcggattgtt 2220 gaccccctct tgcagatctg ccgtctatct ggaactctcc ccattcggag gtatctccgt 2280 ctttctccat gtatgccttg acatcggagc tggatttagc tccctgaatg tttggatgga 2340 aatgtgctga cctggttggg gataccaggt cgaagaatct gttattctgg catttatatt 2400 tgccctcgaa ttgaatgaga acatggaggt gagggctccc atcttcgtga agctctctgc 2460 aaattttaat aaatttttta ttagttgggg ttgagaggtt tagtaattgg gaaagtgctt 2520 cctctttaga gagagggcac tgtggatacg tgaggaaata atttttagcg tttattgcga 2580 aacgcctggg aggagccatg ttgacttggt caattgggga tcaaccatct atcccattca 2640 atcggggaat ggggatcaat ttatacttga gaccctaatg gcataattgt aattttggaa 2700 tgacgtggaa attcatcgcg gccatccgtt taatatt 2737 //